RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 L3MBTL2Q969R5 705 aa15.22■□□□□ 0.03
CLCN6-208ENST00000494028 ABCA6Q8N139 1617 aa15.21■□□□□ 0.03
CLCN6-208ENST00000494028 RALGAPBQ86X10 1494 aa15.21■□□□□ 0.03
CLCN6-208ENST00000494028 CEP152O94986 1710 aa15.21■□□□□ 0.03
CLCN6-208ENST00000494028 GLI2P10070 1586 aa15.21■□□□□ 0.03
CLCN6-208ENST00000494028 POGZQ7Z3K3 1410 aa15.21■□□□□ 0.03
CLCN6-208ENST00000494028 ZNF518AQ6AHZ1 1483 aa15.2■□□□□ 0.02
CLCN6-208ENST00000494028 RICTORQ6R327 1708 aa15.2■□□□□ 0.02
CLCN6-208ENST00000494028 UHRF1BP1Q6BDS2 1440 aa15.2■□□□□ 0.02
CLCN6-208ENST00000494028 SCAPERQ9BY12 1400 aa15.2■□□□□ 0.02
CLCN6-208ENST00000494028 ATP10AO60312 1499 aa15.2■□□□□ 0.02
CLCN6-208ENST00000494028 PLA2R1Q13018 1463 aa15.2■□□□□ 0.02
CLCN6-208ENST00000494028 FRMPD1Q5SYB0 1578 aa15.19■□□□□ 0.02
CLCN6-208ENST00000494028 TRPM2O94759 1503 aa15.19■□□□□ 0.02
CLCN6-208ENST00000494028 TRPM1Q7Z4N2 1603 aa15.19■□□□□ 0.02
CLCN6-208ENST00000494028 DIP2BQ9P265 1576 aa15.19■□□□□ 0.02
CLCN6-208ENST00000494028 SPAG9O60271 1321 aaKnown RBP15.18■□□□□ 0.02
CLCN6-208ENST00000494028 NEO1Q92859 1461 aa15.17■□□□□ 0.02
CLCN6-208ENST00000494028 CD109Q6YHK3 1445 aa15.17■□□□□ 0.02
CLCN6-208ENST00000494028 KIF13AQ9H1H9 1805 aa15.16■□□□□ 0.02
CLCN6-208ENST00000494028 LAMC1P11047 1609 aa15.16■□□□□ 0.02
CLCN6-208ENST00000494028 CLTCL1P53675 1640 aa15.16■□□□□ 0.02
CLCN6-208ENST00000494028 PPRC1Q5VV67 1664 aaKnown RBP15.16■□□□□ 0.02
CLCN6-208ENST00000494028 NBPF8Q3BBV2 869 aa15.15■□□□□ 0.02
CLCN6-208ENST00000494028 EFCAB6Q5THR3 1501 aa15.15■□□□□ 0.02
CLCN6-208ENST00000494028 NPM1P06748 294 aaKnown RBP eCLIP15.14■□□□□ 0.01
CLCN6-208ENST00000494028 CCDC144AA2RUR9 1427 aa15.14■□□□□ 0.01
CLCN6-208ENST00000494028 DIP2CQ9Y2E4 1556 aa15.14■□□□□ 0.01
CLCN6-208ENST00000494028 A2MP01023 1474 aa15.14■□□□□ 0.01
CLCN6-208ENST00000494028 SPATA31E1Q6ZUB1 1445 aa15.13■□□□□ 0.01
CLCN6-208ENST00000494028 MLH3Q9UHC1 1453 aa15.13■□□□□ 0.01
CLCN6-208ENST00000494028 AFAP1Q8N556 730 aa15.12■□□□□ 0.01
CLCN6-208ENST00000494028 HIRIP3Q9BW71 556 aaPredicted RBP15.12■□□□□ 0.01
CLCN6-208ENST00000494028 LMTK2Q8IWU2 1503 aa15.12■□□□□ 0.01
CLCN6-208ENST00000494028 HSPA5P11021 654 aaKnown RBP15.11■□□□□ 0.01
CLCN6-208ENST00000494028 MADDQ8WXG6 1647 aa15.1■□□□□ 0.01
CLCN6-208ENST00000494028 NEURL4Q96JN8 1562 aa15.1■□□□□ 0.01
CLCN6-208ENST00000494028 IFT172Q9UG01 1749 aa15.09■□□□□ 0.01
CLCN6-208ENST00000494028 ZMYM4Q5VZL5 1548 aa15.09■□□□□ 0.01
CLCN6-208ENST00000494028 MROH2AA6NES4 1674 aa15.09■□□□□ 0.01
CLCN6-208ENST00000494028 DHX29Q7Z478 1369 aaKnown RBP15.08■□□□□ 0
CLCN6-208ENST00000494028 PTPRTO14522 1441 aa15.08■□□□□ 0
CLCN6-208ENST00000494028 PRAG1Q86YV5 1406 aa15.08■□□□□ 0
CLCN6-208ENST00000494028 ZC3H13Q5T200 1668 aaKnown RBP15.07■□□□□ 0
CLCN6-208ENST00000494028 EIF4G2P78344 907 aaKnown RBP eCLIP15.07■□□□□ 0
CLCN6-208ENST00000494028 CNTLNQ9NXG0 1405 aa15.07■□□□□ 0
CLCN6-208ENST00000494028 CAMSAP1Q5T5Y3 1602 aa15.06■□□□□ 0
CLCN6-208ENST00000494028 DDX10Q13206 875 aaKnown RBP15.06■□□□□ 0
CLCN6-208ENST00000494028 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.06■□□□□ 03e-8■□□□□ 11.1
CLCN6-208ENST00000494028 CENPBP07199 599 aaPredicted RBP15.05■□□□□ -0
CLCN6-208ENST00000494028 WASHC2AQ641Q2 1341 aa15.05■□□□□ -0
CLCN6-208ENST00000494028 USP47Q96K76 1375 aa15.05■□□□□ -0
CLCN6-208ENST00000494028 CCDC7Q96M83 1385 aa15.05■□□□□ -0
CLCN6-208ENST00000494028 KIF1BO60333 1816 aa15.04■□□□□ -0
CLCN6-208ENST00000494028 IQGAP1P46940 1657 aa15.04■□□□□ -0
CLCN6-208ENST00000494028 FAM69CQ0P6D2 419 aa15.03■□□□□ -0
CLCN6-208ENST00000494028 TSPOAP1O95153 1857 aa15.03■□□□□ -0
CLCN6-208ENST00000494028 ABCC3O15438 1527 aa15.02■□□□□ -0
CLCN6-208ENST00000494028 KANK1Q14678 1352 aa15.02■□□□□ -0
CLCN6-208ENST00000494028 UGGT1Q9NYU2 1555 aa15.02□□□□□ -0.01
CLCN6-208ENST00000494028 KIAA1210Q9ULL0 1709 aa15.01□□□□□ -0.01
CLCN6-208ENST00000494028 YTHDC1Q96MU7 727 aaKnown RBP15.01□□□□□ -0.01
CLCN6-208ENST00000494028 ADGRB3O60242 1522 aa15.01□□□□□ -0.01
CLCN6-208ENST00000494028 SIGLEC1Q9BZZ2 1709 aa15□□□□□ -0.01
CLCN6-208ENST00000494028 GPRASP1Q5JY77 1395 aa14.99□□□□□ -0.01
CLCN6-208ENST00000494028 REREQ9P2R6 1566 aa14.98□□□□□ -0.01
CLCN6-208ENST00000494028 PIK3C2BO00750 1634 aa14.97□□□□□ -0.01
CLCN6-208ENST00000494028 ZNF326Q5BKZ1 582 aaKnown RBP14.97□□□□□ -0.01
CLCN6-208ENST00000494028 MYOM2P54296 1465 aa14.96□□□□□ -0.01
CLCN6-208ENST00000494028 KIF3BO15066 747 aa14.96□□□□□ -0.01
CLCN6-208ENST00000494028 PPLO60437 1756 aa14.96□□□□□ -0.02
CLCN6-208ENST00000494028 KIF7Q2M1P5 1343 aa14.95□□□□□ -0.02
CLCN6-208ENST00000494028 SCAF1Q9H7N4 1312 aaKnown RBP14.95□□□□□ -0.02
CLCN6-208ENST00000494028 YEATS2Q9ULM3 1422 aa14.95□□□□□ -0.02
CLCN6-208ENST00000494028 C11orf95C9JLR9 678 aaPredicted RBP14.95□□□□□ -0.02
CLCN6-208ENST00000494028 ARHGEF40Q8TER5 1519 aa14.95□□□□□ -0.02
CLCN6-208ENST00000494028 SYNMO15061 1565 aa14.94□□□□□ -0.02
CLCN6-208ENST00000494028 TRHP20396 242 aaPredicted RBP14.94□□□□□ -0.02
CLCN6-208ENST00000494028 DCAF11Q8TEB1 546 aa14.94□□□□□ -0.02
CLCN6-208ENST00000494028 ROCK2O75116 1388 aaKnown RBP14.94□□□□□ -0.02
CLCN6-208ENST00000494028 NPATQ14207 1427 aa14.93□□□□□ -0.02
CLCN6-208ENST00000494028 MYT1LQ9UL68 1186 aa14.93□□□□□ -0.02
CLCN6-208ENST00000494028 COL17A1Q9UMD9 1497 aaPredicted RBP14.93□□□□□ -0.02
CLCN6-208ENST00000494028 PREX1Q8TCU6 1659 aa14.92□□□□□ -0.02
CLCN6-208ENST00000494028 CCER2I3L3R5 266 aa14.91□□□□□ -0.02
CLCN6-208ENST00000494028 ANP32CO43423 234 aa14.91□□□□□ -0.02
CLCN6-208ENST00000494028 AEBP2Q6ZN18 517 aaPredicted RBP14.91□□□□□ -0.02
CLCN6-208ENST00000494028 KDM2AQ9Y2K7 1162 aa14.9□□□□□ -0.02
CLCN6-208ENST00000494028 CARD11Q9BXL7 1154 aa14.89□□□□□ -0.03
CLCN6-208ENST00000494028 NRXN1Q9ULB1 1477 aa14.89□□□□□ -0.03
CLCN6-208ENST00000494028 MYO3AQ8NEV4 1616 aa14.88□□□□□ -0.03
CLCN6-208ENST00000494028 AGLP35573 1532 aa14.88□□□□□ -0.03
CLCN6-208ENST00000494028 RAPGEF3O95398 923 aa14.88□□□□□ -0.03
CLCN6-208ENST00000494028 CFAP65Q6ZU64 1925 aaKnown RBP14.88□□□□□ -0.03
CLCN6-208ENST00000494028 NOS1P29475 1434 aa14.87□□□□□ -0.03
CLCN6-208ENST00000494028 ARHGAP31Q2M1Z3 1444 aa14.86□□□□□ -0.03
CLCN6-208ENST00000494028 RGL3Q3MIN7 710 aa14.86□□□□□ -0.03
CLCN6-208ENST00000494028 MYOM1P52179 1685 aa14.86□□□□□ -0.03
CLCN6-208ENST00000494028 ARID4BQ4LE39 1312 aaPredicted RBP14.86□□□□□ -0.03
CLCN6-208ENST00000494028 MYO5BQ9ULV0 1848 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms