RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 SRPK2P78362 688 aaKnown RBP8.48□□□□□ -1.05
NF1-215ENST00000493220 THEMISQ8N1K5 641 aaPredicted RBP8.47□□□□□ -1.05
NF1-215ENST00000493220 HDGFL2Q7Z4V5 671 aaPredicted RBP8.47□□□□□ -1.05
NF1-215ENST00000493220 ABCC5O15440 1437 aa8.47□□□□□ -1.05
NF1-215ENST00000493220 WDR43Q15061 677 aaKnown RBP eCLIP8.47□□□□□ -1.05
NF1-215ENST00000493220 STK26Q9P289 416 aa8.47□□□□□ -1.05
NF1-215ENST00000493220 DUOX2Q9NRD8 1548 aa8.47□□□□□ -1.05
NF1-215ENST00000493220 SLC52A1Q9NWF4 448 aa8.47□□□□□ -1.05
NF1-215ENST00000493220 ERBINQ96RT1 1412 aa8.46□□□□□ -1.05
NF1-215ENST00000493220 KDM5BQ9UGL1 1544 aa8.46□□□□□ -1.06
NF1-215ENST00000493220 ZBTB7CA1YPR0 619 aa8.46□□□□□ -1.06
NF1-215ENST00000493220 ZCCHC11Q5TAX3 1644 aaKnown RBP8.46□□□□□ -1.06
NF1-215ENST00000493220 DHX29Q7Z478 1369 aaKnown RBP8.45□□□□□ -1.06
NF1-215ENST00000493220 SYCP2Q9BX26 1530 aa8.45□□□□□ -1.06
NF1-215ENST00000493220 DNAJC5Q9H3Z4 198 aa8.45□□□□□ -1.06
NF1-215ENST00000493220 RTEL1-TNFRSF6BF6WH68 1400 aa8.45□□□□□ -1.06
NF1-215ENST00000493220 SHANK2Q9UPX8 1470 aa8.45□□□□□ -1.06
NF1-215ENST00000493220 RPGRIP1LQ68CZ1 1315 aa8.44□□□□□ -1.06
NF1-215ENST00000493220 TCOF1Q13428 1488 aaKnown RBP8.44□□□□□ -1.06
NF1-215ENST00000493220 DDX10Q13206 875 aaKnown RBP8.44□□□□□ -1.06
NF1-215ENST00000493220 DHX57Q6P158 1386 aaKnown RBP8.44□□□□□ -1.06
NF1-215ENST00000493220 LMOD2Q6P5Q4 547 aa8.43□□□□□ -1.06
NF1-215ENST00000493220 A2MP01023 1474 aa8.43□□□□□ -1.06
NF1-215ENST00000493220 MYO5CQ9NQX4 1742 aa8.43□□□□□ -1.06
NF1-215ENST00000493220 PNNQ9H307 717 aaKnown RBP8.42□□□□□ -1.06
NF1-215ENST00000493220 NUTM2DQ5VT03 806 aaPredicted RBP8.42□□□□□ -1.06
NF1-215ENST00000493220 CNTLNQ9NXG0 1405 aa8.41□□□□□ -1.06
NF1-215ENST00000493220 ANKLE2Q86XL3 938 aa8.41□□□□□ -1.06
NF1-215ENST00000493220 L3MBTL2Q969R5 705 aa8.41□□□□□ -1.06
NF1-215ENST00000493220 TERF2IPQ9NYB0 399 aa8.41□□□□□ -1.06
NF1-215ENST00000493220 RIMBP3CA6NJZ7 1639 aa8.41□□□□□ -1.06
NF1-215ENST00000493220 RIMBP3BA6NNM3 1639 aa8.41□□□□□ -1.06
NF1-215ENST00000493220 RIMBP3Q9UFD9 1639 aa8.41□□□□□ -1.06
NF1-215ENST00000493220 CANXP27824 592 aaKnown RBP8.41□□□□□ -1.06
NF1-215ENST00000493220 NPM2Q86SE8 214 aaKnown RBP8.41□□□□□ -1.06
NF1-215ENST00000493220 NUDCQ9Y266 331 aa8.41□□□□□ -1.06
NF1-215ENST00000493220 SAFB2Q14151 953 aaKnown RBP eCLIP8.4□□□□□ -1.06
NF1-215ENST00000493220 ATP10AO60312 1499 aa8.4□□□□□ -1.06
NF1-215ENST00000493220 ZFYVE16Q7Z3T8 1539 aa8.4□□□□□ -1.07
NF1-215ENST00000493220 MAPKBP1O60336 1514 aa8.4□□□□□ -1.07
NF1-215ENST00000493220 SHROOM2Q13796 1616 aa8.39□□□□□ -1.07
NF1-215ENST00000493220 TXNDC2Q86VQ3 553 aa8.39□□□□□ -1.07
NF1-215ENST00000493220 NCOA1Q15788 1441 aa8.39□□□□□ -1.07
NF1-215ENST00000493220 EVC2Q86UK5 1308 aa8.39□□□□□ -1.07
NF1-215ENST00000493220 DMRT2Q9Y5R5 561 aa8.39□□□□□ -1.07
NF1-215ENST00000493220 FAM135AQ9P2D6 1515 aa8.39□□□□□ -1.07
NF1-215ENST00000493220 HSPA5P11021 654 aaKnown RBP8.38□□□□□ -1.07
NF1-215ENST00000493220 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.38□□□□□ -1.07
NF1-215ENST00000493220 NAIPQ13075 1403 aa8.38□□□□□ -1.07
NF1-215ENST00000493220 ANKRD30BQ9BXX2 1392 aa8.38□□□□□ -1.07
NF1-215ENST00000493220 ATP7AQ04656 1500 aa8.38□□□□□ -1.07
NF1-215ENST00000493220 ZBTB47Q9UFB7 747 aaPredicted RBP8.38□□□□□ -1.07
NF1-215ENST00000493220 DNMT1P26358 1616 aaKnown RBP8.37□□□□□ -1.07
NF1-215ENST00000493220 ATF3P18847 181 aa8.37□□□□□ -1.07
NF1-215ENST00000493220 TRAPPC8Q9Y2L5 1435 aa8.37□□□□□ -1.07
NF1-215ENST00000493220 NGDNQ8NEJ9 315 aaKnown RBP8.37□□□□□ -1.07
NF1-215ENST00000493220 ARHGEF5Q12774 1597 aa8.37□□□□□ -1.07
NF1-215ENST00000493220 PLEKHG5O94827 1062 aa8.36□□□□□ -1.07
NF1-215ENST00000493220 TNRQ92752 1358 aa8.36□□□□□ -1.07
NF1-215ENST00000493220 PAK3O75914 559 aaPredicted RBP8.36□□□□□ -1.07
NF1-215ENST00000493220 TRAK1Q9UPV9 953 aa8.36□□□□□ -1.07
NF1-215ENST00000493220 ERCC6L2Q5T890 1561 aa8.36□□□□□ -1.07
NF1-215ENST00000493220 MAGI2Q86UL8 1455 aa8.36□□□□□ -1.07
NF1-215ENST00000493220 HIRIP3Q9BW71 556 aaPredicted RBP8.36□□□□□ -1.07
NF1-215ENST00000493220 MORC1Q86VD1 984 aa8.36□□□□□ -1.07
NF1-215ENST00000493220 BCL11AQ9H165 835 aa8.36□□□□□ -1.07
NF1-215ENST00000493220 MRS2Q9HD23 443 aa8.36□□□□□ -1.07
NF1-215ENST00000493220 ARAP3Q8WWN8 1544 aa8.35□□□□□ -1.07
NF1-215ENST00000493220 PREX2Q70Z35 1606 aa8.35□□□□□ -1.07
NF1-215ENST00000493220 MAGI3Q5TCQ9 1506 aa8.35□□□□□ -1.07
NF1-215ENST00000493220 KTN1Q86UP2 1357 aaKnown RBP8.34□□□□□ -1.07
NF1-215ENST00000493220 MAPK8IP3Q9UPT6 1336 aa8.34□□□□□ -1.07
NF1-215ENST00000493220 ADGBQ8N7X0 1667 aa8.34□□□□□ -1.07
NF1-215ENST00000493220 PPM1GO15355 546 aaPredicted RBP8.34□□□□□ -1.07
NF1-215ENST00000493220 ADCY10Q96PN6 1610 aa8.34□□□□□ -1.07
NF1-215ENST00000493220 FAM9BQ8IZU0 186 aa8.33□□□□□ -1.08
NF1-215ENST00000493220 ADGRL2O95490 1459 aa8.33□□□□□ -1.08
NF1-215ENST00000493220 CENPJQ9HC77 1338 aaPredicted RBP8.33□□□□□ -1.08
NF1-215ENST00000493220 A0A0G2JS52 829 aa8.32□□□□□ -1.08
NF1-215ENST00000493220 KCNA4P22459 653 aa8.32□□□□□ -1.08
NF1-215ENST00000493220 PROSER2Q86WR7 435 aaPredicted RBP8.32□□□□□ -1.08
NF1-215ENST00000493220 TTC37Q6PGP7 1564 aa8.32□□□□□ -1.08
NF1-215ENST00000493220 USP47Q96K76 1375 aa8.32□□□□□ -1.08
NF1-215ENST00000493220 CC2D1BQ5T0F9 858 aaKnown RBP8.31□□□□□ -1.08
NF1-215ENST00000493220 ABCC1P33527 1531 aa8.31□□□□□ -1.08
NF1-215ENST00000493220 HECW2Q9P2P5 1572 aa8.31□□□□□ -1.08
NF1-215ENST00000493220 RALBP1Q15311 655 aa8.31□□□□□ -1.08
NF1-215ENST00000493220 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.31□□□□□ -1.08
NF1-215ENST00000493220 KDM6BO15054 1643 aa8.3□□□□□ -1.08
NF1-215ENST00000493220 PSME1Q06323 249 aa8.3□□□□□ -1.08
NF1-215ENST00000493220 CSB-PGBD3P0DP91 1061 aa8.3□□□□□ -1.08
NF1-215ENST00000493220 MINK1Q8N4C8 1332 aaPredicted RBP8.3□□□□□ -1.08
NF1-215ENST00000493220 MAST1Q9Y2H9 1570 aa8.29□□□□□ -1.08
NF1-215ENST00000493220 TAOK2Q9UL54 1235 aa8.29□□□□□ -1.08
NF1-215ENST00000493220 TSPOAP1O95153 1857 aa8.29□□□□□ -1.08
NF1-215ENST00000493220 CGNL1Q0VF96 1302 aa8.29□□□□□ -1.08
NF1-215ENST00000493220 SAMD9LQ8IVG5 1584 aa8.29□□□□□ -1.08
NF1-215ENST00000493220 MEX3CQ5U5Q3 659 aaKnown RBP8.29□□□□□ -1.08
NF1-215ENST00000493220 GPRASP1Q5JY77 1395 aa8.29□□□□□ -1.08
NF1-215ENST00000493220 UHRF1BP1Q6BDS2 1440 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms