RNA–Protein interactions for RNA: ENST00000493026.2

PSMD11-205, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 2

Gene PSMD11, Length 2,387 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-205ENST00000493026 C11orf95C9JLR9 678 aaPredicted RBP17.48■□□□□ 0.39
PSMD11-205ENST00000493026 POLR1AO95602 1720 aaPredicted RBP17.48■□□□□ 0.39
PSMD11-205ENST00000493026 NECTIN2Q92692 538 aa17.47■□□□□ 0.39
PSMD11-205ENST00000493026 CEP170Q5SW79 1584 aa17.47■□□□□ 0.39
PSMD11-205ENST00000493026 SHANK2Q9UPX8 1470 aa17.46■□□□□ 0.39
PSMD11-205ENST00000493026 CHMP7Q8WUX9 453 aaPredicted RBP17.46■□□□□ 0.39
PSMD11-205ENST00000493026 PLB1Q6P1J6 1458 aa17.46■□□□□ 0.39
PSMD11-205ENST00000493026 KIF7Q2M1P5 1343 aa17.46■□□□□ 0.38
PSMD11-205ENST00000493026 CROCC2H7BZ55 1655 aa17.45■□□□□ 0.38
PSMD11-205ENST00000493026 CHGAP10645 457 aaKnown RBP17.44■□□□□ 0.38
PSMD11-205ENST00000493026 ZBED9Q6R2W3 1325 aa17.44■□□□□ 0.38
PSMD11-205ENST00000493026 ANP32EQ9BTT0 268 aa17.44■□□□□ 0.38
PSMD11-205ENST00000493026 ANKRD50Q9ULJ7 1429 aa17.42■□□□□ 0.38
PSMD11-205ENST00000493026 JPH4Q96JJ6 628 aa17.42■□□□□ 0.38
PSMD11-205ENST00000493026 RBM19Q9Y4C8 960 aaKnown RBP17.42■□□□□ 0.38
PSMD11-205ENST00000493026 UHRF1BP1Q6BDS2 1440 aa17.41■□□□□ 0.38
PSMD11-205ENST00000493026 KIF14Q15058 1648 aa17.41■□□□□ 0.38
PSMD11-205ENST00000493026 MRS2Q9HD23 443 aa17.4■□□□□ 0.38
PSMD11-205ENST00000493026 ABCA8O94911 1581 aa17.4■□□□□ 0.38
PSMD11-205ENST00000493026 ABCC10Q5T3U5 1492 aa17.39■□□□□ 0.37
PSMD11-205ENST00000493026 KDM5DQ9BY66 1539 aa17.39■□□□□ 0.37
PSMD11-205ENST00000493026 PLEKHD1A6NEE1 506 aa17.39■□□□□ 0.37
PSMD11-205ENST00000493026 ARHGEF12Q9NZN5 1544 aa17.39■□□□□ 0.37
PSMD11-205ENST00000493026 CCDC184Q52MB2 194 aa17.38■□□□□ 0.37
PSMD11-205ENST00000493026 ROCK2O75116 1388 aaKnown RBP17.37■□□□□ 0.37
PSMD11-205ENST00000493026 USP47Q96K76 1375 aa17.37■□□□□ 0.37
PSMD11-205ENST00000493026 PPP4R2Q9NY27 417 aa17.36■□□□□ 0.37
PSMD11-205ENST00000493026 DHX29Q7Z478 1369 aaKnown RBP17.35■□□□□ 0.37
PSMD11-205ENST00000493026 SPDYE4A6NLX3 237 aa17.35■□□□□ 0.37
PSMD11-205ENST00000493026 CCDC9Q9Y3X0 531 aaKnown RBP17.35■□□□□ 0.37
PSMD11-205ENST00000493026 C9orf84Q5VXU9 1444 aa17.35■□□□□ 0.37
PSMD11-205ENST00000493026 ATP10BO94823 1461 aa17.35■□□□□ 0.37
PSMD11-205ENST00000493026 RALGAPBQ86X10 1494 aa17.35■□□□□ 0.37
PSMD11-205ENST00000493026 RNF216Q9NWF9 866 aaPredicted RBP17.35■□□□□ 0.37
PSMD11-205ENST00000493026 PTPRGP23470 1445 aa17.34■□□□□ 0.37
PSMD11-205ENST00000493026 ZNF777Q9ULD5 760 aaPredicted RBP17.33■□□□□ 0.37
PSMD11-205ENST00000493026 ARHGEF5Q12774 1597 aa17.33■□□□□ 0.37
PSMD11-205ENST00000493026 NEUROD2Q15784 382 aa17.32■□□□□ 0.36
PSMD11-205ENST00000493026 FAM9BQ8IZU0 186 aa17.32■□□□□ 0.36
PSMD11-205ENST00000493026 KDM5CP41229 1560 aa17.32■□□□□ 0.36
PSMD11-205ENST00000493026 CDC42BPAQ5VT25 1732 aa17.32■□□□□ 0.36
PSMD11-205ENST00000493026 NUP155O75694 1391 aa17.31■□□□□ 0.36
PSMD11-205ENST00000493026 TSPY4P0CV99 314 aa17.31■□□□□ 0.36
PSMD11-205ENST00000493026 TSPY10P0CW01 314 aa17.31■□□□□ 0.36
PSMD11-205ENST00000493026 RSPH4AQ5TD94 716 aa17.31■□□□□ 0.36
PSMD11-205ENST00000493026 KTN1Q86UP2 1357 aaKnown RBP17.3■□□□□ 0.36
PSMD11-205ENST00000493026 FANCIQ9NVI1 1328 aa17.29■□□□□ 0.36
PSMD11-205ENST00000493026 SMG6Q86US8 1419 aaKnown RBP17.28■□□□□ 0.36
PSMD11-205ENST00000493026 BCORL1Q5H9F3 1711 aa17.27■□□□□ 0.35
PSMD11-205ENST00000493026 KIF15Q9NS87 1388 aa17.26■□□□□ 0.35
PSMD11-205ENST00000493026 CCDC141Q6ZP82 1450 aa17.23■□□□□ 0.35
PSMD11-205ENST00000493026 RNF123Q5XPI4 1314 aa17.22■□□□□ 0.35
PSMD11-205ENST00000493026 IRX6P78412 446 aaPredicted RBP17.22■□□□□ 0.35
PSMD11-205ENST00000493026 CARD11Q9BXL7 1154 aa17.22■□□□□ 0.35
PSMD11-205ENST00000493026 PROM2Q8N271 834 aa17.21■□□□□ 0.35
PSMD11-205ENST00000493026 ZMYND15Q9H091 742 aa17.21■□□□□ 0.34
PSMD11-205ENST00000493026 ZNF326Q5BKZ1 582 aaKnown RBP17.2■□□□□ 0.34
PSMD11-205ENST00000493026 LMOD2Q6P5Q4 547 aa17.2■□□□□ 0.34
PSMD11-205ENST00000493026 PNISRQ8TF01 805 aaKnown RBP17.2■□□□□ 0.34
PSMD11-205ENST00000493026 NUDCQ9Y266 331 aa17.2■□□□□ 0.34
PSMD11-205ENST00000493026 RALBP1Q15311 655 aa17.18■□□□□ 0.34
PSMD11-205ENST00000493026 BRD4O60885 1362 aaPredicted RBP17.18■□□□□ 0.34
PSMD11-205ENST00000493026 PREX2Q70Z35 1606 aa17.18■□□□□ 0.34
PSMD11-205ENST00000493026 MAST1Q9Y2H9 1570 aa17.18■□□□□ 0.34
PSMD11-205ENST00000493026 FAM135AQ9P2D6 1515 aa17.17■□□□□ 0.34
PSMD11-205ENST00000493026 LRPPRCP42704 1394 aaKnown RBP17.16■□□□□ 0.34
PSMD11-205ENST00000493026 HNRNPMP52272 730 aaKnown RBP eCLIP17.16■□□□□ 0.34
PSMD11-205ENST00000493026 ZNF428Q96B54 188 aa17.16■□□□□ 0.34
PSMD11-205ENST00000493026 SAMD9LQ8IVG5 1584 aa17.16■□□□□ 0.34
PSMD11-205ENST00000493026 ZBTB7CA1YPR0 619 aa17.15■□□□□ 0.34
PSMD11-205ENST00000493026 TMC1Q8TDI8 760 aa17.15■□□□□ 0.34
PSMD11-205ENST00000493026 PLEKHH2Q8IVE3 1493 aa17.14■□□□□ 0.33
PSMD11-205ENST00000493026 ST20-MTHFSA0A0A6YYL1 179 aa17.14■□□□□ 0.33
PSMD11-205ENST00000493026 RSPH6AQ9H0K4 717 aa17.14■□□□□ 0.33
PSMD11-205ENST00000493026 MYBBP1AQ9BQG0 1328 aaKnown RBP17.14■□□□□ 0.33
PSMD11-205ENST00000493026 GPRASP1Q5JY77 1395 aa17.14■□□□□ 0.33
PSMD11-205ENST00000493026 DCAF11Q8TEB1 546 aa17.14■□□□□ 0.33
PSMD11-205ENST00000493026 CCDC144AA2RUR9 1427 aa17.13■□□□□ 0.33
PSMD11-205ENST00000493026 PRAG1Q86YV5 1406 aa17.13■□□□□ 0.33
PSMD11-205ENST00000493026 UNC13BO14795 1591 aa17.13■□□□□ 0.33
PSMD11-205ENST00000493026 WASHC2CQ9Y4E1 1318 aa17.12■□□□□ 0.33
PSMD11-205ENST00000493026 CDC42BPBQ9Y5S2 1711 aa17.12■□□□□ 0.33
PSMD11-205ENST00000493026 E9PCH4 1651 aa17.11■□□□□ 0.33
PSMD11-205ENST00000493026 POLR3GLQ9BT43 218 aa17.11■□□□□ 0.33
PSMD11-205ENST00000493026 LAMC1P11047 1609 aa17.11■□□□□ 0.33
PSMD11-205ENST00000493026 ATP10AO60312 1499 aa17.1■□□□□ 0.33
PSMD11-205ENST00000493026 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.1■□□□□ 0.33
PSMD11-205ENST00000493026 INSRP06213 1382 aa17.1■□□□□ 0.33
PSMD11-205ENST00000493026 PLXNC1O60486 1568 aa17.1■□□□□ 0.33
PSMD11-205ENST00000493026 MSH5O43196 834 aa17.09■□□□□ 0.33
PSMD11-205ENST00000493026 B4GALNT3Q6L9W6 998 aa17.09■□□□□ 0.33
PSMD11-205ENST00000493026 CHMP4AQ9BY43 222 aa17.09■□□□□ 0.33
PSMD11-205ENST00000493026 TRPM1Q7Z4N2 1603 aa17.08■□□□□ 0.33
PSMD11-205ENST00000493026 SHROOM2Q13796 1616 aa17.07■□□□□ 0.32
PSMD11-205ENST00000493026 SLC24A3Q9HC58 644 aa17.07■□□□□ 0.32
PSMD11-205ENST00000493026 PARD3Q8TEW0 1356 aa17.07■□□□□ 0.32
PSMD11-205ENST00000493026 PLA2R1Q13018 1463 aa17.07■□□□□ 0.32
PSMD11-205ENST00000493026 PDIA4P13667 645 aaKnown RBP17.07■□□□□ 0.32
PSMD11-205ENST00000493026 ZMYM4Q5VZL5 1548 aa17.06■□□□□ 0.32
PSMD11-205ENST00000493026 NLRP13Q86W25 1043 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms