RNA–Protein interactions for RNA: ENST00000492692.1

CSMD3-206, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 1,830 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-206ENST00000492692 UACAQ9BZF9 1416 aa14.18□□□□□ -0.14
CSMD3-206ENST00000492692 MYH16Q9H6N6 1097 aa14.18□□□□□ -0.14
CSMD3-206ENST00000492692 PRDM10Q9NQV6 1147 aa14.18□□□□□ -0.14
CSMD3-206ENST00000492692 SLC52A1Q9NWF4 448 aa14.18□□□□□ -0.14
CSMD3-206ENST00000492692 FAM13BQ9NYF5 915 aa14.18□□□□□ -0.14
CSMD3-206ENST00000492692 CCDC9Q9Y3X0 531 aaKnown RBP14.18□□□□□ -0.14
CSMD3-206ENST00000492692 CEP120Q8N960 986 aa14.16□□□□□ -0.14
CSMD3-206ENST00000492692 AQRO60306 1485 aaKnown RBP eCLIP14.16□□□□□ -0.14
CSMD3-206ENST00000492692 HMGB1P09429 215 aaKnown RBP14.15□□□□□ -0.14
CSMD3-206ENST00000492692 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.15□□□□□ -0.14
CSMD3-206ENST00000492692 KDM5BQ9UGL1 1544 aa14.14□□□□□ -0.15
CSMD3-206ENST00000492692 HFM1A2PYH4 1435 aa14.13□□□□□ -0.15
CSMD3-206ENST00000492692 CNTLNQ9NXG0 1405 aa14.13□□□□□ -0.15
CSMD3-206ENST00000492692 FYCO1Q9BQS8 1478 aa14.13□□□□□ -0.15
CSMD3-206ENST00000492692 PRDM2Q13029 1718 aa14.13□□□□□ -0.15
CSMD3-206ENST00000492692 CLSTN1O94985 981 aa14.13□□□□□ -0.15
CSMD3-206ENST00000492692 RALBP1Q15311 655 aa14.13□□□□□ -0.15
CSMD3-206ENST00000492692 PANK2Q9BZ23 570 aa14.13□□□□□ -0.15
CSMD3-206ENST00000492692 TSPYL1Q9H0U9 437 aa14.13□□□□□ -0.15
CSMD3-206ENST00000492692 NUDCQ9Y266 331 aa14.13□□□□□ -0.15
CSMD3-206ENST00000492692 CCDC18Q5T9S5 1454 aa14.13□□□□□ -0.15
CSMD3-206ENST00000492692 APPP05067 770 aa14.12□□□□□ -0.15
CSMD3-206ENST00000492692 IRX5P78411 483 aaPredicted RBP14.12□□□□□ -0.15
CSMD3-206ENST00000492692 FAM50AQ14320 339 aaKnown RBP14.12□□□□□ -0.15
CSMD3-206ENST00000492692 HMGXB3Q12766 1538 aa14.12□□□□□ -0.15
CSMD3-206ENST00000492692 PCF11O94913 1555 aaKnown RBP14.12□□□□□ -0.15
CSMD3-206ENST00000492692 SOX12O15370 315 aa14.11□□□□□ -0.15
CSMD3-206ENST00000492692 PTPN23Q9H3S7 1636 aa14.11□□□□□ -0.15
CSMD3-206ENST00000492692 HIRIP3Q9BW71 556 aaPredicted RBP14.11□□□□□ -0.15
CSMD3-206ENST00000492692 POLR1AO95602 1720 aaPredicted RBP14.1□□□□□ -0.15
CSMD3-206ENST00000492692 EFCAB5A4FU69 1503 aa14.1□□□□□ -0.15
CSMD3-206ENST00000492692 ZSCAN30Q86W11 494 aa14.1□□□□□ -0.15
CSMD3-206ENST00000492692 AKNAQ7Z591 1439 aa14.1□□□□□ -0.15
CSMD3-206ENST00000492692 MYCNP04198 464 aaPredicted RBP14.08□□□□□ -0.15
CSMD3-206ENST00000492692 PLCD4Q9BRC7 762 aa14.08□□□□□ -0.15
CSMD3-206ENST00000492692 IGF1RP08069 1367 aa14.08□□□□□ -0.15
CSMD3-206ENST00000492692 ABCA5Q8WWZ7 1642 aa14.08□□□□□ -0.16
CSMD3-206ENST00000492692 GRPEL1Q9HAV7 217 aa14.08□□□□□ -0.16
CSMD3-206ENST00000492692 CASKIN1Q8WXD9 1431 aa14.08□□□□□ -0.16
CSMD3-206ENST00000492692 UQCRHLA0A096LP55 91 aa14.07□□□□□ -0.16
CSMD3-206ENST00000492692 UQCRHP07919 91 aa14.07□□□□□ -0.16
CSMD3-206ENST00000492692 HS1BP3Q53T59 392 aa14.07□□□□□ -0.16
CSMD3-206ENST00000492692 POLR3GLQ9BT43 218 aa14.07□□□□□ -0.16
CSMD3-206ENST00000492692 CARD10Q9BWT7 1032 aa14.07□□□□□ -0.16
CSMD3-206ENST00000492692 FGD6Q6ZV73 1430 aa14.06□□□□□ -0.16
CSMD3-206ENST00000492692 CC2D1BQ5T0F9 858 aaKnown RBP14.06□□□□□ -0.16
CSMD3-206ENST00000492692 FGD5Q6ZNL6 1462 aa14.06□□□□□ -0.16
CSMD3-206ENST00000492692 CFTRP13569 1480 aa14.05□□□□□ -0.16
CSMD3-206ENST00000492692 PATL2C9JE40 543 aaKnown RBP14.05□□□□□ -0.16
CSMD3-206ENST00000492692 SLC4A3P48751 1232 aa14.05□□□□□ -0.16
CSMD3-206ENST00000492692 PPP1R9BQ96SB3 815 aa14.05□□□□□ -0.16
CSMD3-206ENST00000492692 EFCC1Q9HA90 598 aa14.05□□□□□ -0.16
CSMD3-206ENST00000492692 CARMIL1Q5VZK9 1371 aa14.04□□□□□ -0.16
CSMD3-206ENST00000492692 ZNF500O60304 480 aaPredicted RBP14.04□□□□□ -0.16
CSMD3-206ENST00000492692 CSPP1Q1MSJ5 1256 aa14.04□□□□□ -0.16
CSMD3-206ENST00000492692 NBPF20Q3BBV1 942 aa14.04□□□□□ -0.16
CSMD3-206ENST00000492692 CGNQ9P2M7 1197 aaKnown RBP14.04□□□□□ -0.16
CSMD3-206ENST00000492692 NCOA1Q15788 1441 aa14.04□□□□□ -0.16
CSMD3-206ENST00000492692 HECW1Q76N89 1606 aa14.04□□□□□ -0.16
CSMD3-206ENST00000492692 CCDC173Q0VFZ6 552 aa14.04□□□□□ -0.16
CSMD3-206ENST00000492692 PRKRIP1Q9H875 184 aaPredicted RBP14.04□□□□□ -0.16
CSMD3-206ENST00000492692 EIF4G2P78344 907 aaKnown RBP eCLIP14.03□□□□□ -0.16
CSMD3-206ENST00000492692 HSPA5P11021 654 aaKnown RBP14.02□□□□□ -0.16
CSMD3-206ENST00000492692 MAPK8IP2Q13387 824 aaPredicted RBP14.02□□□□□ -0.16
CSMD3-206ENST00000492692 SASS6Q6UVJ0 657 aa14.02□□□□□ -0.16
CSMD3-206ENST00000492692 FMN1Q68DA7 1419 aa14.02□□□□□ -0.16
CSMD3-206ENST00000492692 E9PSI1 815 aa14.01□□□□□ -0.17
CSMD3-206ENST00000492692 TULP2O00295 520 aa14.01□□□□□ -0.17
CSMD3-206ENST00000492692 NAIPQ13075 1403 aa14.01□□□□□ -0.17
CSMD3-206ENST00000492692 BECN1Q14457 450 aa14.01□□□□□ -0.17
CSMD3-206ENST00000492692 TMED8Q6PL24 325 aaPredicted RBP14.01□□□□□ -0.17
CSMD3-206ENST00000492692 NINLQ9Y2I6 1382 aa14.01□□□□□ -0.17
CSMD3-206ENST00000492692 CCDC66A2RUB6 948 aa14.01□□□□□ -0.17
CSMD3-206ENST00000492692 TMC1Q8TDI8 760 aa14.01□□□□□ -0.17
CSMD3-206ENST00000492692 GCC2Q8IWJ2 1684 aa14□□□□□ -0.17
CSMD3-206ENST00000492692 NBPF1Q3BBV0 1214 aa14□□□□□ -0.17
CSMD3-206ENST00000492692 R3HCC1Q9Y3T6 440 aaKnown RBP14□□□□□ -0.17
CSMD3-206ENST00000492692 ZBTB22O15209 634 aa13.99□□□□□ -0.17
CSMD3-206ENST00000492692 NGEFQ8N5V2 710 aa13.99□□□□□ -0.17
CSMD3-206ENST00000492692 CCDC7Q96M83 1385 aa13.99□□□□□ -0.17
CSMD3-206ENST00000492692 MSNP26038 577 aaKnown RBP13.99□□□□□ -0.17
CSMD3-206ENST00000492692 EGFL6Q8IUX8 553 aa13.99□□□□□ -0.17
CSMD3-206ENST00000492692 FAM161AQ3B820 660 aa13.98□□□□□ -0.17
CSMD3-206ENST00000492692 SETQ01105 290 aaPredicted RBP13.97□□□□□ -0.17
CSMD3-206ENST00000492692 MRS2Q9HD23 443 aa13.97□□□□□ -0.17
CSMD3-206ENST00000492692 SCAPERQ9BY12 1400 aa13.97□□□□□ -0.17
CSMD3-206ENST00000492692 MCM5P33992 734 aa13.97□□□□□ -0.17
CSMD3-206ENST00000492692 GABPB1Q06547 395 aaPredicted RBP13.97□□□□□ -0.17
CSMD3-206ENST00000492692 TPRNQ4KMQ1 711 aa13.97□□□□□ -0.17
CSMD3-206ENST00000492692 FAM43BQ6ZT52 329 aaPredicted RBP13.97□□□□□ -0.17
CSMD3-206ENST00000492692 ANTXR1Q9H6X2 564 aa13.97□□□□□ -0.17
CSMD3-206ENST00000492692 VIRMAQ69YN4 1812 aaKnown RBP13.96□□□□□ -0.17
CSMD3-206ENST00000492692 THOC2Q8NI27 1593 aaKnown RBP13.96□□□□□ -0.17
CSMD3-206ENST00000492692 KCNJ4P48050 445 aa13.96□□□□□ -0.17
CSMD3-206ENST00000492692 TIGD1Q96MW7 591 aa13.96□□□□□ -0.17
CSMD3-206ENST00000492692 KIF3AQ9Y496 699 aa13.96□□□□□ -0.17
CSMD3-206ENST00000492692 PTPRKQ15262 1439 aa13.95□□□□□ -0.18
CSMD3-206ENST00000492692 MCM4P33991 863 aa13.94□□□□□ -0.18
CSMD3-206ENST00000492692 CTTNBP2Q8WZ74 1663 aa13.94□□□□□ -0.18
CSMD3-206ENST00000492692 CCDC184Q52MB2 194 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms