RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 SAFB2Q14151 953 aaKnown RBP eCLIP20.08■□□□□ 0.8
TNFRSF1B-203ENST00000492361 CRBNQ96SW2 442 aa20.08■□□□□ 0.8
TNFRSF1B-203ENST00000492361 TCOF1Q13428 1488 aaKnown RBP20.08■□□□□ 0.8
TNFRSF1B-203ENST00000492361 GRIN2AQ12879 1464 aa20.07■□□□□ 0.8
TNFRSF1B-203ENST00000492361 WDR62O43379 1518 aa20.07■□□□□ 0.8
TNFRSF1B-203ENST00000492361 DISP1Q96F81 1524 aa20.06■□□□□ 0.8
TNFRSF1B-203ENST00000492361 ADAMTS8Q9UP79 889 aa20.05■□□□□ 0.8
TNFRSF1B-203ENST00000492361 DHX29Q7Z478 1369 aaKnown RBP20.04■□□□□ 0.8
TNFRSF1B-203ENST00000492361 PZPP20742 1482 aa20.04■□□□□ 0.8
TNFRSF1B-203ENST00000492361 IFT140Q96RY7 1462 aa20.04■□□□□ 0.8
TNFRSF1B-203ENST00000492361 TEX14Q8IWB6 1497 aa20.03■□□□□ 0.8
TNFRSF1B-203ENST00000492361 KIF3BO15066 747 aa20.02■□□□□ 0.8
TNFRSF1B-203ENST00000492361 C20orf194Q5TEA3 1177 aa20.02■□□□□ 0.8
TNFRSF1B-203ENST00000492361 FRAT1Q92837 279 aaPredicted RBP20.01■□□□□ 0.79
TNFRSF1B-203ENST00000492361 IPO9Q96P70 1041 aaKnown RBP20.01■□□□□ 0.79
TNFRSF1B-203ENST00000492361 RRP7AQ9Y3A4 280 aaKnown RBP20■□□□□ 0.79
TNFRSF1B-203ENST00000492361 NEFMP07197 916 aa20■□□□□ 0.79
TNFRSF1B-203ENST00000492361 TARBP1Q13395 1621 aaKnown RBP20■□□□□ 0.79
TNFRSF1B-203ENST00000492361 PDE4AP27815 886 aa19.99■□□□□ 0.79
TNFRSF1B-203ENST00000492361 ARXQ96QS3 562 aa19.99■□□□□ 0.79
TNFRSF1B-203ENST00000492361 ADAMTS12P58397 1594 aa19.98■□□□□ 0.79
TNFRSF1B-203ENST00000492361 SPATA31E1Q6ZUB1 1445 aa19.98■□□□□ 0.79
TNFRSF1B-203ENST00000492361 SMG6Q86US8 1419 aaKnown RBP19.97■□□□□ 0.79
TNFRSF1B-203ENST00000492361 GGT6Q6P531 493 aa19.97■□□□□ 0.79
TNFRSF1B-203ENST00000492361 APAF1O14727 1248 aa19.95■□□□□ 0.78
TNFRSF1B-203ENST00000492361 EFCAB2Q5VUJ9 269 aa19.95■□□□□ 0.78
TNFRSF1B-203ENST00000492361 KIF14Q15058 1648 aa19.95■□□□□ 0.78
TNFRSF1B-203ENST00000492361 BCL2L13Q9BXK5 485 aa19.94■□□□□ 0.78
TNFRSF1B-203ENST00000492361 RAPGEF6Q8TEU7 1601 aa19.93■□□□□ 0.78
TNFRSF1B-203ENST00000492361 TRAK1Q9UPV9 953 aa19.93■□□□□ 0.78
TNFRSF1B-203ENST00000492361 DISP3Q9P2K9 1392 aa19.93■□□□□ 0.78
TNFRSF1B-203ENST00000492361 ATP10BO94823 1461 aa19.93■□□□□ 0.78
TNFRSF1B-203ENST00000492361 MAGI1Q96QZ7 1491 aaPredicted RBP19.93■□□□□ 0.78
TNFRSF1B-203ENST00000492361 KIAA0556O60303 1618 aa19.93■□□□□ 0.78
TNFRSF1B-203ENST00000492361 SPAG9O60271 1321 aaKnown RBP19.92■□□□□ 0.78
TNFRSF1B-203ENST00000492361 CFAP70Q5T0N1 1121 aa19.92■□□□□ 0.78
TNFRSF1B-203ENST00000492361 PBRM1Q86U86 1689 aa19.9■□□□□ 0.78
TNFRSF1B-203ENST00000492361 BRD4O60885 1362 aaPredicted RBP19.9■□□□□ 0.78
TNFRSF1B-203ENST00000492361 CLUAP1Q96AJ1 413 aa19.89■□□□□ 0.78
TNFRSF1B-203ENST00000492361 STK26Q9P289 416 aa19.88■□□□□ 0.77
TNFRSF1B-203ENST00000492361 TMEM132EQ6IEE7 984 aa19.87■□□□□ 0.77
TNFRSF1B-203ENST00000492361 ARHGAP5Q13017 1502 aa19.86■□□□□ 0.77
TNFRSF1B-203ENST00000492361 PLEKHH2Q8IVE3 1493 aa19.86■□□□□ 0.77
TNFRSF1B-203ENST00000492361 DNMT1P26358 1616 aaKnown RBP19.86■□□□□ 0.77
TNFRSF1B-203ENST00000492361 GOLGA2Q08379 1002 aa19.86■□□□□ 0.77
TNFRSF1B-203ENST00000492361 GCC2Q8IWJ2 1684 aa19.86■□□□□ 0.77
TNFRSF1B-203ENST00000492361 SYNJ2O15056 1496 aa19.85■□□□□ 0.77
TNFRSF1B-203ENST00000492361 PPP2R1AP30153 589 aa19.85■□□□□ 0.77
TNFRSF1B-203ENST00000492361 TCERG1O14776 1098 aaKnown RBP19.85■□□□□ 0.77
TNFRSF1B-203ENST00000492361 PPM1GO15355 546 aaPredicted RBP19.84■□□□□ 0.77
TNFRSF1B-203ENST00000492361 BCAR3O75815 825 aa19.84■□□□□ 0.77
TNFRSF1B-203ENST00000492361 ARID4BQ4LE39 1312 aaPredicted RBP19.83■□□□□ 0.76
TNFRSF1B-203ENST00000492361 PER1O15534 1290 aaPredicted RBP19.82■□□□□ 0.76
TNFRSF1B-203ENST00000492361 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.82■□□□□ 0.76
TNFRSF1B-203ENST00000492361 TESK2Q96S53 571 aa19.82■□□□□ 0.76
TNFRSF1B-203ENST00000492361 RSPH4AQ5TD94 716 aa19.82■□□□□ 0.76
TNFRSF1B-203ENST00000492361 SPRYD3Q8NCJ5 442 aa19.82■□□□□ 0.76
TNFRSF1B-203ENST00000492361 PLPPR3Q6T4P5 718 aa19.8■□□□□ 0.76
TNFRSF1B-203ENST00000492361 EIF4G3O43432 1585 aaKnown RBP19.8■□□□□ 0.76
TNFRSF1B-203ENST00000492361 PDE3BQ13370 1112 aa19.8■□□□□ 0.76
TNFRSF1B-203ENST00000492361 MORC1Q86VD1 984 aa19.8■□□□□ 0.76
TNFRSF1B-203ENST00000492361 COG6Q9Y2V7 657 aa19.8■□□□□ 0.76
TNFRSF1B-203ENST00000492361 BCORL1Q5H9F3 1711 aa19.79■□□□□ 0.76
TNFRSF1B-203ENST00000492361 U2SURPO15042 1029 aaKnown RBP19.79■□□□□ 0.76
TNFRSF1B-203ENST00000492361 CDCA8Q53HL2 280 aa19.78■□□□□ 0.76
TNFRSF1B-203ENST00000492361 PANK1Q8TE04 598 aa19.77■□□□□ 0.76
TNFRSF1B-203ENST00000492361 ERBINQ96RT1 1412 aa19.77■□□□□ 0.75
TNFRSF1B-203ENST00000492361 CEP170Q5SW79 1584 aa19.76■□□□□ 0.75
TNFRSF1B-203ENST00000492361 NPM1P06748 294 aaKnown RBP eCLIP19.76■□□□□ 0.75
TNFRSF1B-203ENST00000492361 SLC12A5Q9H2X9 1139 aa19.75■□□□□ 0.75
TNFRSF1B-203ENST00000492361 BACH2Q9BYV9 841 aa19.74■□□□□ 0.75
TNFRSF1B-203ENST00000492361 SPINK5Q9NQ38 1064 aaPredicted RBP19.74■□□□□ 0.75
TNFRSF1B-203ENST00000492361 RALGAPBQ86X10 1494 aa19.73■□□□□ 0.75
TNFRSF1B-203ENST00000492361 CCDC141Q6ZP82 1450 aa19.73■□□□□ 0.75
TNFRSF1B-203ENST00000492361 U2AF1L5P0DN76 240 aaPredicted RBP19.72■□□□□ 0.75
TNFRSF1B-203ENST00000492361 U2AF1Q01081 240 aaKnown RBP eCLIP19.72■□□□□ 0.75
TNFRSF1B-203ENST00000492361 SLKQ9H2G2 1235 aaPredicted RBP19.72■□□□□ 0.75
TNFRSF1B-203ENST00000492361 PRAG1Q86YV5 1406 aa19.7■□□□□ 0.74
TNFRSF1B-203ENST00000492361 STAG3Q9UJ98 1225 aa19.7■□□□□ 0.74
TNFRSF1B-203ENST00000492361 SYCP2Q9BX26 1530 aa19.7■□□□□ 0.74
TNFRSF1B-203ENST00000492361 ADGRF5Q8IZF2 1346 aa19.69■□□□□ 0.74
TNFRSF1B-203ENST00000492361 IL27Q8NEV9 243 aa19.69■□□□□ 0.74
TNFRSF1B-203ENST00000492361 DMRT2Q9Y5R5 561 aa19.69■□□□□ 0.74
TNFRSF1B-203ENST00000492361 FAM135AQ9P2D6 1515 aa19.68■□□□□ 0.74
TNFRSF1B-203ENST00000492361 SRPK2P78362 688 aaKnown RBP19.68■□□□□ 0.74
TNFRSF1B-203ENST00000492361 SCAPERQ9BY12 1400 aa19.67■□□□□ 0.74
TNFRSF1B-203ENST00000492361 DUSP27Q5VZP5 1158 aa19.67■□□□□ 0.74
TNFRSF1B-203ENST00000492361 PARD3Q8TEW0 1356 aa19.66■□□□□ 0.74
TNFRSF1B-203ENST00000492361 PLEKHH1Q9ULM0 1364 aa19.66■□□□□ 0.74
TNFRSF1B-203ENST00000492361 RNF123Q5XPI4 1314 aa19.66■□□□□ 0.74
TNFRSF1B-203ENST00000492361 LRPPRCP42704 1394 aaKnown RBP19.66■□□□□ 0.74
TNFRSF1B-203ENST00000492361 KANK1Q14678 1352 aa19.66■□□□□ 0.74
TNFRSF1B-203ENST00000492361 MLECQ14165 292 aa19.64■□□□□ 0.74
TNFRSF1B-203ENST00000492361 AMER1Q5JTC6 1135 aaPredicted RBP19.64■□□□□ 0.73
TNFRSF1B-203ENST00000492361 TNNQ9UQP3 1299 aa19.63■□□□□ 0.73
TNFRSF1B-203ENST00000492361 A2MP01023 1474 aa19.63■□□□□ 0.73
TNFRSF1B-203ENST00000492361 DDRGK1Q96HY6 314 aa19.63■□□□□ 0.73
TNFRSF1B-203ENST00000492361 CABP2Q9NPB3 220 aa19.63■□□□□ 0.73
TNFRSF1B-203ENST00000492361 KDM5CP41229 1560 aa19.62■□□□□ 0.73
TNFRSF1B-203ENST00000492361 CENPJQ9HC77 1338 aaPredicted RBP19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms