RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 UPF1Q92900 1129 aaKnown RBP eCLIP7.41□□□□□ -1.22
CRNKL1-203ENST00000490258 NISCHQ9Y2I1 1504 aa7.41□□□□□ -1.22
CRNKL1-203ENST00000490258 PPP1R3GB7ZBB8 358 aa7.4□□□□□ -1.22
CRNKL1-203ENST00000490258 PROX2Q3B8N5 592 aa7.4□□□□□ -1.22
CRNKL1-203ENST00000490258 STK17AQ9UEE5 414 aa7.39□□□□□ -1.23
CRNKL1-203ENST00000490258 TSR3Q9UJK0 312 aaKnown RBP7.39□□□□□ -1.23
CRNKL1-203ENST00000490258 POTECB2RU33 542 aa7.38□□□□□ -1.23
CRNKL1-203ENST00000490258 PPP1R18Q6NYC8 613 aa7.38□□□□□ -1.23
CRNKL1-203ENST00000490258 ANO8Q9HCE9 1232 aaPredicted RBP7.37□□□□□ -1.23
CRNKL1-203ENST00000490258 HPS5Q9UPZ3 1129 aa7.36□□□□□ -1.23
CRNKL1-203ENST00000490258 KIAA1468Q9P260 1216 aa7.35□□□□□ -1.23
CRNKL1-203ENST00000490258 MYT1Q01538 1121 aa7.34□□□□□ -1.23
CRNKL1-203ENST00000490258 TJAP1Q5JTD0 557 aa7.34□□□□□ -1.23
CRNKL1-203ENST00000490258 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.34□□□□□ -1.23
CRNKL1-203ENST00000490258 COL9A1P20849 921 aa7.33□□□□□ -1.24
CRNKL1-203ENST00000490258 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.33□□□□□ -1.24
CRNKL1-203ENST00000490258 PKDCCQ504Y2 493 aa7.32□□□□□ -1.24
CRNKL1-203ENST00000490258 LRCH3Q96II8 777 aa7.32□□□□□ -1.24
CRNKL1-203ENST00000490258 DNAJC5Q9H3Z4 198 aa7.32□□□□□ -1.24
CRNKL1-203ENST00000490258 SEPT9Q9UHD8 586 aaPredicted RBP7.32□□□□□ -1.24
CRNKL1-203ENST00000490258 HS6ST3Q8IZP7 471 aa7.31□□□□□ -1.24
CRNKL1-203ENST00000490258 ONECUT3O60422 494 aaPredicted RBP7.3□□□□□ -1.24
CRNKL1-203ENST00000490258 EVI5O60447 810 aa7.3□□□□□ -1.24
CRNKL1-203ENST00000490258 FAM98CQ17RN3 349 aaKnown RBP7.3□□□□□ -1.24
CRNKL1-203ENST00000490258 DGAT1O75907 488 aa7.29□□□□□ -1.24
CRNKL1-203ENST00000490258 NKX1-1Q15270 411 aaPredicted RBP7.28□□□□□ -1.24
CRNKL1-203ENST00000490258 IL21Q9HBE4 155 aa7.28□□□□□ -1.24
CRNKL1-203ENST00000490258 PPP4CP60510 307 aa7.27□□□□□ -1.25
CRNKL1-203ENST00000490258 INSM1Q01101 510 aaPredicted RBP7.27□□□□□ -1.25
CRNKL1-203ENST00000490258 TRIM67Q6ZTA4 783 aa7.27□□□□□ -1.25
CRNKL1-203ENST00000490258 MTRQ99707 1265 aa7.27□□□□□ -1.25
CRNKL1-203ENST00000490258 RTN4Q9NQC3 1192 aaKnown RBP7.27□□□□□ -1.25
CRNKL1-203ENST00000490258 WFS1O76024 890 aa7.26□□□□□ -1.25
CRNKL1-203ENST00000490258 PCDHGA10Q9Y5H3 936 aa7.25□□□□□ -1.25
CRNKL1-203ENST00000490258 WIPF1O43516 503 aa7.24□□□□□ -1.25
CRNKL1-203ENST00000490258 GGCXP38435 758 aa7.22□□□□□ -1.25
CRNKL1-203ENST00000490258 PPP1R15BQ5SWA1 713 aa7.22□□□□□ -1.25
CRNKL1-203ENST00000490258 ZNF516Q92618 1163 aa7.22□□□□□ -1.25
CRNKL1-203ENST00000490258 TRIM6-TRIM34B2RNG4 842 aa7.21□□□□□ -1.26
CRNKL1-203ENST00000490258 FBXW7Q969H0 707 aa7.21□□□□□ -1.26
CRNKL1-203ENST00000490258 AMER1Q5JTC6 1135 aaPredicted RBP7.2□□□□□ -1.26
CRNKL1-203ENST00000490258 TYW1BQ6NUM6 668 aa7.2□□□□□ -1.26
CRNKL1-203ENST00000490258 PRR20EP86478 221 aa7.19□□□□□ -1.26
CRNKL1-203ENST00000490258 PRR20CP86479 221 aa7.19□□□□□ -1.26
CRNKL1-203ENST00000490258 PRR20DP86480 221 aa7.19□□□□□ -1.26
CRNKL1-203ENST00000490258 PRR20BP86481 221 aa7.19□□□□□ -1.26
CRNKL1-203ENST00000490258 PRR20AP86496 221 aa7.19□□□□□ -1.26
CRNKL1-203ENST00000490258 TMUB1Q9BVT8 246 aa7.19□□□□□ -1.26
CRNKL1-203ENST00000490258 FAM187AA6NFU0 413 aa7.18□□□□□ -1.26
CRNKL1-203ENST00000490258 CHGAP10645 457 aaKnown RBP7.18□□□□□ -1.26
CRNKL1-203ENST00000490258 NKX2-3Q8TAU0 364 aa7.18□□□□□ -1.26
CRNKL1-203ENST00000490258 CRISPLD2Q9H0B8 497 aa7.18□□□□□ -1.26
CRNKL1-203ENST00000490258 ST8SIA5O15466 376 aa7.17□□□□□ -1.26
CRNKL1-203ENST00000490258 NFX1Q12986 1120 aaKnown RBP7.17□□□□□ -1.26
CRNKL1-203ENST00000490258 SUZ12Q15022 739 aaKnown RBP7.17□□□□□ -1.26
CRNKL1-203ENST00000490258 AAASQ9NRG9 546 aa7.17□□□□□ -1.26
CRNKL1-203ENST00000490258 PHF14O94880 888 aa7.16□□□□□ -1.26
CRNKL1-203ENST00000490258 SLC19A1P41440 591 aa7.16□□□□□ -1.26
CRNKL1-203ENST00000490258 MAP3K9P80192 1104 aa7.16□□□□□ -1.26
CRNKL1-203ENST00000490258 C6orf132Q5T0Z8 1188 aa7.15□□□□□ -1.26
CRNKL1-203ENST00000490258 GTPBP6O43824 516 aaPredicted RBP7.14□□□□□ -1.27
CRNKL1-203ENST00000490258 SPRYD7Q5W111 196 aa7.13□□□□□ -1.27
CRNKL1-203ENST00000490258 SAMD7Q7Z3H4 446 aa7.13□□□□□ -1.27
CRNKL1-203ENST00000490258 ZNF598Q86UK7 904 aaKnown RBP7.13□□□□□ -1.27
CRNKL1-203ENST00000490258 PACS2Q86VP3 889 aa7.11□□□□□ -1.27
CRNKL1-203ENST00000490258 EMID1Q96A84 441 aaPredicted RBP7.11□□□□□ -1.27
CRNKL1-203ENST00000490258 FAM181BA6NEQ2 426 aa7.1□□□□□ -1.27
CRNKL1-203ENST00000490258 C11orf95C9JLR9 678 aaPredicted RBP7.09□□□□□ -1.27
CRNKL1-203ENST00000490258 TNFRSF10AO00220 468 aa7.08□□□□□ -1.28
CRNKL1-203ENST00000490258 GDF9O60383 454 aa7.08□□□□□ -1.28
CRNKL1-203ENST00000490258 PDE4AP27815 886 aa7.08□□□□□ -1.28
CRNKL1-203ENST00000490258 APLP1P51693 650 aa7.08□□□□□ -1.28
CRNKL1-203ENST00000490258 RNF223E7ERA6 249 aa7.07□□□□□ -1.28
CRNKL1-203ENST00000490258 ZNF697Q5TEC3 545 aa7.07□□□□□ -1.28
CRNKL1-203ENST00000490258 EPAS1Q99814 870 aa7.07□□□□□ -1.28
CRNKL1-203ENST00000490258 GMPR2Q9P2T1 348 aaKnown RBP7.07□□□□□ -1.28
CRNKL1-203ENST00000490258 DACH1Q9UI36 760 aa7.07□□□□□ -1.28
CRNKL1-203ENST00000490258 TSKSQ9UJT2 592 aa7.07□□□□□ -1.28
CRNKL1-203ENST00000490258 NCKAP5LQ9HCH0 1330 aa7.06□□□□□ -1.28
CRNKL1-203ENST00000490258 COPS2P61201 443 aa7.06□□□□□ -1.28
CRNKL1-203ENST00000490258 LCE2CQ5TA81 110 aa7.06□□□□□ -1.28
CRNKL1-203ENST00000490258 CRIPAKQ8N1N5 446 aa7.06□□□□□ -1.28
CRNKL1-203ENST00000490258 SMAPO00193 183 aa7.03□□□□□ -1.28
CRNKL1-203ENST00000490258 ZPR1O75312 459 aa7.03□□□□□ -1.28
CRNKL1-203ENST00000490258 EMILIN3Q9NT22 766 aa7.03□□□□□ -1.28
CRNKL1-203ENST00000490258 RNF40O75150 1001 aa7.02□□□□□ -1.29
CRNKL1-203ENST00000490258 LIAT1Q6ZQX7 453 aa7.02□□□□□ -1.29
CRNKL1-203ENST00000490258 CADPS2Q86UW7 1296 aa7.02□□□□□ -1.29
CRNKL1-203ENST00000490258 BBXQ8WY36 941 aaPredicted RBP7.02□□□□□ -1.29
CRNKL1-203ENST00000490258 RBM33Q96EV2 1170 aaKnown RBP7.02□□□□□ -1.29
CRNKL1-203ENST00000490258 TERTO14746 1132 aaKnown RBP7.01□□□□□ -1.29
CRNKL1-203ENST00000490258 ANKLE1Q8NAG6 615 aa7.01□□□□□ -1.29
CRNKL1-203ENST00000490258 DDX27Q96GQ7 796 aaKnown RBP7.01□□□□□ -1.29
CRNKL1-203ENST00000490258 AXIN1O15169 862 aa6.99□□□□□ -1.29
CRNKL1-203ENST00000490258 HDGFP51858 240 aaKnown RBP6.99□□□□□ -1.29
CRNKL1-203ENST00000490258 NECTIN2Q92692 538 aa6.99□□□□□ -1.29
CRNKL1-203ENST00000490258 LARP6Q9BRS8 491 aaKnown RBP6.99□□□□□ -1.29
CRNKL1-203ENST00000490258 AVPP01185 164 aa6.98□□□□□ -1.29
CRNKL1-203ENST00000490258 DCAF8L2P0C7V8 631 aa6.98□□□□□ -1.29
CRNKL1-203ENST00000490258 RYDENQ9NUL5 291 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms