RNA–Protein interactions for RNA: ENST00000489994.5

IFRD1-215, Transcript of interferon related developmental regulator 1, humanhuman

TSL 1 (best)

Gene IFRD1, Length 1,721 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1-215ENST00000489994 NEFLP07196 543 aa8.31□□□□□ -1.08
IFRD1-215ENST00000489994 WDR70Q9NW82 654 aa8.31□□□□□ -1.08
IFRD1-215ENST00000489994 CDAN1Q8IWY9 1227 aa8.3□□□□□ -1.08
IFRD1-215ENST00000489994 TBC1D12O60347 775 aa8.29□□□□□ -1.08
IFRD1-215ENST00000489994 CFTRP13569 1480 aa8.29□□□□□ -1.08
IFRD1-215ENST00000489994 HOXB1P14653 301 aaPredicted RBP8.29□□□□□ -1.08
IFRD1-215ENST00000489994 LCE2DQ5TA82 110 aaPredicted RBP8.29□□□□□ -1.08
IFRD1-215ENST00000489994 ARHGEF11O15085 1522 aa8.29□□□□□ -1.08
IFRD1-215ENST00000489994 PTCD2Q8WV60 388 aaKnown RBP8.28□□□□□ -1.08
IFRD1-215ENST00000489994 PKNOX2Q96KN3 472 aa8.28□□□□□ -1.08
IFRD1-215ENST00000489994 GPR153Q6NV75 609 aa8.27□□□□□ -1.09
IFRD1-215ENST00000489994 PCDHGA4Q9Y5G9 962 aa8.27□□□□□ -1.09
IFRD1-215ENST00000489994 PDE4CQ08493 712 aa8.26□□□□□ -1.09
IFRD1-215ENST00000489994 ARSIQ5FYB1 569 aa8.26□□□□□ -1.09
IFRD1-215ENST00000489994 LMOD2Q6P5Q4 547 aa8.26□□□□□ -1.09
IFRD1-215ENST00000489994 EMP3P54852 163 aa8.26□□□□□ -1.09
IFRD1-215ENST00000489994 CHD1O14646 1710 aa8.25□□□□□ -1.09
IFRD1-215ENST00000489994 HRCP23327 699 aa8.25□□□□□ -1.09
IFRD1-215ENST00000489994 MARVELD3Q96A59 401 aa8.25□□□□□ -1.09
IFRD1-215ENST00000489994 ZNF608Q9ULD9 1512 aaPredicted RBP8.24□□□□□ -1.09
IFRD1-215ENST00000489994 OXER1Q8TDS5 423 aa8.24□□□□□ -1.09
IFRD1-215ENST00000489994 UPF1Q92900 1129 aaKnown RBP eCLIP8.24□□□□□ -1.09
IFRD1-215ENST00000489994 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.23□□□□□ -1.09
IFRD1-215ENST00000489994 CAMK2BQ13554 666 aa8.23□□□□□ -1.09
IFRD1-215ENST00000489994 NUDT7P0C024 238 aa8.22□□□□□ -1.09
IFRD1-215ENST00000489994 MMRN1Q13201 1228 aa8.22□□□□□ -1.09
IFRD1-215ENST00000489994 E2F4Q16254 413 aa8.22□□□□□ -1.09
IFRD1-215ENST00000489994 KCNV2Q8TDN2 545 aa8.22□□□□□ -1.09
IFRD1-215ENST00000489994 TOP2AP11388 1531 aaKnown RBP8.21□□□□□ -1.09
IFRD1-215ENST00000489994 ZNF316A6NFI3 1004 aaPredicted RBP8.21□□□□□ -1.09
IFRD1-215ENST00000489994 MAP3K9P80192 1104 aa8.21□□□□□ -1.09
IFRD1-215ENST00000489994 KHSRPQ92945 711 aaKnown RBP eCLIP8.21□□□□□ -1.099e-14■■■□□ 18.4
IFRD1-215ENST00000489994 EIF4G3O43432 1585 aaKnown RBP8.21□□□□□ -1.1
IFRD1-215ENST00000489994 ERBB3P21860 1342 aa8.21□□□□□ -1.1
IFRD1-215ENST00000489994 IFT140Q96RY7 1462 aa8.2□□□□□ -1.1
IFRD1-215ENST00000489994 FAM205CA6NFA0 338 aa8.2□□□□□ -1.1
IFRD1-215ENST00000489994 TAF7LQ5H9L4 462 aa8.2□□□□□ -1.1
IFRD1-215ENST00000489994 EMILIN3Q9NT22 766 aa8.2□□□□□ -1.1
IFRD1-215ENST00000489994 ARAP1Q96P48 1450 aa8.19□□□□□ -1.1
IFRD1-215ENST00000489994 CYB5RLQ6IPT4 315 aa8.19□□□□□ -1.1
IFRD1-215ENST00000489994 TOPBP1Q92547 1522 aa8.18□□□□□ -1.1
IFRD1-215ENST00000489994 HS3ST6Q96QI5 342 aa8.17□□□□□ -1.1
IFRD1-215ENST00000489994 RSF1Q96T23 1441 aaPredicted RBP8.17□□□□□ -1.1
IFRD1-215ENST00000489994 TARBP1Q13395 1621 aaKnown RBP8.17□□□□□ -1.1
IFRD1-215ENST00000489994 LOC105371045A0A1W2PR82 267 aa8.16□□□□□ -1.1
IFRD1-215ENST00000489994 PSDA5PKW4 1024 aaPredicted RBP8.16□□□□□ -1.1
IFRD1-215ENST00000489994 EVI5O60447 810 aa8.16□□□□□ -1.1
IFRD1-215ENST00000489994 BRPF1P55201 1214 aaPredicted RBP8.16□□□□□ -1.1
IFRD1-215ENST00000489994 VARS2Q5ST30 1063 aaKnown RBP8.16□□□□□ -1.1
IFRD1-215ENST00000489994 LHX6Q9UPM6 363 aa8.16□□□□□ -1.1
IFRD1-215ENST00000489994 KDM4FA0A1W2PPD8 638 aa8.15□□□□□ -1.1
IFRD1-215ENST00000489994 DPYSL4O14531 572 aa8.15□□□□□ -1.1
IFRD1-215ENST00000489994 CHMP4AQ9BY43 222 aa8.15□□□□□ -1.1
IFRD1-215ENST00000489994 CDK11AQ9UQ88 783 aaPredicted RBP8.15□□□□□ -1.1
IFRD1-215ENST00000489994 BRD2P25440 801 aaKnown RBP8.15□□□□□ -1.11
IFRD1-215ENST00000489994 ANP32EQ9BTT0 268 aa8.14□□□□□ -1.11
IFRD1-215ENST00000489994 ARIH1Q9Y4X5 557 aaPredicted RBP8.14□□□□□ -1.11
IFRD1-215ENST00000489994 DNMBPQ6XZF7 1577 aa8.13□□□□□ -1.11
IFRD1-215ENST00000489994 TRIM26Q12899 539 aaPredicted RBP8.13□□□□□ -1.11
IFRD1-215ENST00000489994 NEUROD2Q15784 382 aa8.13□□□□□ -1.11
IFRD1-215ENST00000489994 ANO8Q9HCE9 1232 aaPredicted RBP8.13□□□□□ -1.11
IFRD1-215ENST00000489994 AQRO60306 1485 aaKnown RBP eCLIP8.13□□□□□ -1.116e-7■■■■□ 22.8
IFRD1-215ENST00000489994 CCDC88BA6NC98 1476 aa8.12□□□□□ -1.11
IFRD1-215ENST00000489994 SPDYE16A6NNV3 312 aaPredicted RBP8.12□□□□□ -1.11
IFRD1-215ENST00000489994 SPNS2Q8IVW8 549 aa8.11□□□□□ -1.11
IFRD1-215ENST00000489994 ZNF687Q8N1G0 1237 aa8.11□□□□□ -1.11
IFRD1-215ENST00000489994 ZC3H15Q8WU90 426 aaKnown RBP8.11□□□□□ -1.11
IFRD1-215ENST00000489994 ARHGEF1Q92888 912 aaKnown RBP8.11□□□□□ -1.11
IFRD1-215ENST00000489994 ABCC8Q09428 1581 aa8.11□□□□□ -1.11
IFRD1-215ENST00000489994 POTEB3A0JP26 581 aa8.1□□□□□ -1.11
IFRD1-215ENST00000489994 CDK11BP21127 795 aaKnown RBP8.1□□□□□ -1.11
IFRD1-215ENST00000489994 PPP4R3BQ5MIZ7 849 aa8.1□□□□□ -1.11
IFRD1-215ENST00000489994 POTEBQ6S5H4 581 aa8.1□□□□□ -1.11
IFRD1-215ENST00000489994 PDIA6Q15084 440 aa8.09□□□□□ -1.11
IFRD1-215ENST00000489994 CLASP1Q7Z460 1538 aa8.09□□□□□ -1.11
IFRD1-215ENST00000489994 ZNF454Q8N9F8 522 aa8.09□□□□□ -1.11
IFRD1-215ENST00000489994 JPH4Q96JJ6 628 aa8.08□□□□□ -1.12
IFRD1-215ENST00000489994 SLC24A3Q9HC58 644 aa8.07□□□□□ -1.12
IFRD1-215ENST00000489994 POLA1P09884 1462 aaPredicted RBP8.07□□□□□ -1.12
IFRD1-215ENST00000489994 SUPT5HO00267 1087 aaKnown RBP8.06□□□□□ -1.12
IFRD1-215ENST00000489994 FOSBP53539 338 aa8.06□□□□□ -1.12
IFRD1-215ENST00000489994 FGD1P98174 961 aa8.06□□□□□ -1.12
IFRD1-215ENST00000489994 PHF14O94880 888 aa8.06□□□□□ -1.12
IFRD1-215ENST00000489994 PBX2P40425 430 aa8.06□□□□□ -1.12
IFRD1-215ENST00000489994 PTGER2P43116 358 aa8.06□□□□□ -1.12
IFRD1-215ENST00000489994 KCNH8Q96L42 1107 aa8.05□□□□□ -1.12
IFRD1-215ENST00000489994 RAD54L2Q9Y4B4 1467 aa8.04□□□□□ -1.12
IFRD1-215ENST00000489994 ZDHHC16Q969W1 377 aa8.04□□□□□ -1.12
IFRD1-215ENST00000489994 EPAS1Q99814 870 aa8.04□□□□□ -1.12
IFRD1-215ENST00000489994 SYNJ1O43426 1573 aa8.04□□□□□ -1.12
IFRD1-215ENST00000489994 TESPA1A2RU30 521 aaPredicted RBP8.03□□□□□ -1.12
IFRD1-215ENST00000489994 SEMA3EO15041 775 aa8.03□□□□□ -1.12
IFRD1-215ENST00000489994 FBXW7Q969H0 707 aa8.03□□□□□ -1.12
IFRD1-215ENST00000489994 SNAPC4Q5SXM2 1469 aa8.03□□□□□ -1.12
IFRD1-215ENST00000489994 TYW1BQ6NUM6 668 aa8.03□□□□□ -1.12
IFRD1-215ENST00000489994 DDX12PQ92771 950 aa8.03□□□□□ -1.12
IFRD1-215ENST00000489994 PCDHGA10Q9Y5H3 936 aa8.03□□□□□ -1.12
IFRD1-215ENST00000489994 WDR97A6NE52 1622 aa8.03□□□□□ -1.12
IFRD1-215ENST00000489994 TDRD9Q8NDG6 1382 aaKnown RBP8.03□□□□□ -1.12
IFRD1-215ENST00000489994 ARHGAP33O14559 1287 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms