RNA–Protein interactions for RNA: ENST00000489914.1

PCGF1-206, Transcript of polycomb group ring finger 1, humanhuman

TSL 1 (best)

Gene PCGF1, Length 433 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1-206ENST00000489914 ANP32CO43423 234 aa10.99□□□□□ -0.65
PCGF1-206ENST00000489914 CLIP1P30622 1438 aa10.99□□□□□ -0.65
PCGF1-206ENST00000489914 ZNF518AQ6AHZ1 1483 aa10.99□□□□□ -0.65
PCGF1-206ENST00000489914 ABCA6Q8N139 1617 aa10.98□□□□□ -0.65
PCGF1-206ENST00000489914 PKD2Q13563 968 aa10.97□□□□□ -0.65
PCGF1-206ENST00000489914 ARHGAP5Q13017 1502 aa10.97□□□□□ -0.65
PCGF1-206ENST00000489914 ZMYM3Q14202 1370 aa10.95□□□□□ -0.66
PCGF1-206ENST00000489914 C11orf95C9JLR9 678 aaPredicted RBP10.95□□□□□ -0.66
PCGF1-206ENST00000489914 KDM5CP41229 1560 aa10.94□□□□□ -0.66
PCGF1-206ENST00000489914 ANP32AP39687 249 aaKnown RBP10.94□□□□□ -0.66
PCGF1-206ENST00000489914 GLIPR1L2Q4G1C9 344 aa10.94□□□□□ -0.66
PCGF1-206ENST00000489914 KIF14Q15058 1648 aa10.94□□□□□ -0.66
PCGF1-206ENST00000489914 CNTLNQ9NXG0 1405 aa10.93□□□□□ -0.66
PCGF1-206ENST00000489914 AGLP35573 1532 aa10.92□□□□□ -0.66
PCGF1-206ENST00000489914 NPATQ14207 1427 aa10.92□□□□□ -0.66
PCGF1-206ENST00000489914 RRBP1Q9P2E9 1410 aaKnown RBP10.92□□□□□ -0.66
PCGF1-206ENST00000489914 CLTCQ00610 1675 aaKnown RBP10.92□□□□□ -0.66
PCGF1-206ENST00000489914 REREQ9P2R6 1566 aa10.91□□□□□ -0.66
PCGF1-206ENST00000489914 RGS17Q9UGC6 210 aaPredicted RBP10.91□□□□□ -0.66
PCGF1-206ENST00000489914 MYO3AQ8NEV4 1616 aa10.91□□□□□ -0.66
PCGF1-206ENST00000489914 MLH3Q9UHC1 1453 aa10.9□□□□□ -0.66
PCGF1-206ENST00000489914 PPP1R15AO75807 674 aaPredicted RBP10.9□□□□□ -0.66
PCGF1-206ENST00000489914 ITGAEP38570 1179 aa10.9□□□□□ -0.66
PCGF1-206ENST00000489914 GGT6Q6P531 493 aa10.9□□□□□ -0.66
PCGF1-206ENST00000489914 SALL2Q9Y467 1007 aaPredicted RBP10.9□□□□□ -0.66
PCGF1-206ENST00000489914 CDC42BPBQ9Y5S2 1711 aa10.89□□□□□ -0.67
PCGF1-206ENST00000489914 MROH2AA6NES4 1674 aa10.89□□□□□ -0.67
PCGF1-206ENST00000489914 TCOF1Q13428 1488 aaKnown RBP10.89□□□□□ -0.67
PCGF1-206ENST00000489914 IPO9Q96P70 1041 aaKnown RBP10.89□□□□□ -0.67
PCGF1-206ENST00000489914 ZNF777Q9ULD5 760 aaPredicted RBP10.89□□□□□ -0.67
PCGF1-206ENST00000489914 KIDINS220Q9ULH0 1771 aa10.89□□□□□ -0.67
PCGF1-206ENST00000489914 CEP170BQ9Y4F5 1589 aaPredicted RBP10.89□□□□□ -0.67
PCGF1-206ENST00000489914 PLA2R1Q13018 1463 aa10.88□□□□□ -0.67
PCGF1-206ENST00000489914 RSPH6AQ9H0K4 717 aa10.88□□□□□ -0.67
PCGF1-206ENST00000489914 ZBTB47Q9UFB7 747 aaPredicted RBP10.88□□□□□ -0.67
PCGF1-206ENST00000489914 ZNF142P52746 1687 aaPredicted RBP10.88□□□□□ -0.67
PCGF1-206ENST00000489914 SHANK2Q9UPX8 1470 aa10.87□□□□□ -0.67
PCGF1-206ENST00000489914 PPM1GO15355 546 aaPredicted RBP10.87□□□□□ -0.67
PCGF1-206ENST00000489914 SP7Q8TDD2 431 aaPredicted RBP10.87□□□□□ -0.67
PCGF1-206ENST00000489914 WASHC2AQ641Q2 1341 aa10.86□□□□□ -0.67
PCGF1-206ENST00000489914 ITSN2Q9NZM3 1697 aa10.86□□□□□ -0.67
PCGF1-206ENST00000489914 PTPRKQ15262 1439 aa10.86□□□□□ -0.67
PCGF1-206ENST00000489914 CPS1P31327 1500 aa10.86□□□□□ -0.67
PCGF1-206ENST00000489914 CCDC136Q96JN2 1154 aa10.86□□□□□ -0.67
PCGF1-206ENST00000489914 EIF5BO60841 1220 aaKnown RBP10.85□□□□□ -0.67
PCGF1-206ENST00000489914 POTEAQ6S8J7 498 aa10.85□□□□□ -0.67
PCGF1-206ENST00000489914 TROQ12816 1431 aaPredicted RBP10.84□□□□□ -0.67
PCGF1-206ENST00000489914 HNRNPMP52272 730 aaKnown RBP eCLIP10.84□□□□□ -0.67
PCGF1-206ENST00000489914 POLR1AO95602 1720 aaPredicted RBP10.84□□□□□ -0.67
PCGF1-206ENST00000489914 DNMT1P26358 1616 aaKnown RBP10.84□□□□□ -0.67
PCGF1-206ENST00000489914 ALKQ9UM73 1620 aa10.84□□□□□ -0.67
PCGF1-206ENST00000489914 ABCC1P33527 1531 aa10.84□□□□□ -0.67
PCGF1-206ENST00000489914 SPAG9O60271 1321 aaKnown RBP10.84□□□□□ -0.67
PCGF1-206ENST00000489914 WASHC2CQ9Y4E1 1318 aa10.84□□□□□ -0.67
PCGF1-206ENST00000489914 DDX10Q13206 875 aaKnown RBP10.83□□□□□ -0.68
PCGF1-206ENST00000489914 FBXO31Q5XUX0 539 aaPredicted RBP10.82□□□□□ -0.68
PCGF1-206ENST00000489914 ANKLE2Q86XL3 938 aa10.82□□□□□ -0.68
PCGF1-206ENST00000489914 A2ML1A8K2U0 1454 aa10.81□□□□□ -0.68
PCGF1-206ENST00000489914 NBR1Q14596 966 aa10.81□□□□□ -0.68
PCGF1-206ENST00000489914 SAMD9LQ8IVG5 1584 aa10.81□□□□□ -0.68
PCGF1-206ENST00000489914 NEURL4Q96JN8 1562 aa10.81□□□□□ -0.68
PCGF1-206ENST00000489914 SETD1AO15047 1707 aaKnown RBP10.81□□□□□ -0.68
PCGF1-206ENST00000489914 LRRIQ1Q96JM4 1722 aa10.81□□□□□ -0.68
PCGF1-206ENST00000489914 PREX2Q70Z35 1606 aa10.8□□□□□ -0.68
PCGF1-206ENST00000489914 CCNB3Q8WWL7 1395 aa10.8□□□□□ -0.68
PCGF1-206ENST00000489914 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.8□□□□□ -0.68
PCGF1-206ENST00000489914 TRIM52Q96A61 297 aa10.8□□□□□ -0.68
PCGF1-206ENST00000489914 VWDEQ8N2E2 1590 aa10.79□□□□□ -0.68
PCGF1-206ENST00000489914 PKNOX2Q96KN3 472 aa10.79□□□□□ -0.68
PCGF1-206ENST00000489914 STRCP1A6NGW2 1772 aa10.78□□□□□ -0.68
PCGF1-206ENST00000489914 FMN1Q68DA7 1419 aa10.78□□□□□ -0.68
PCGF1-206ENST00000489914 HOXD11P31277 338 aaPredicted RBP10.78□□□□□ -0.68
PCGF1-206ENST00000489914 A2MP01023 1474 aa10.78□□□□□ -0.68
PCGF1-206ENST00000489914 CDC42BPAQ5VT25 1732 aa10.78□□□□□ -0.68
PCGF1-206ENST00000489914 TNRQ92752 1358 aa10.77□□□□□ -0.68
PCGF1-206ENST00000489914 SYCP2Q9BX26 1530 aa10.77□□□□□ -0.69
PCGF1-206ENST00000489914 NPHP4O75161 1426 aaPredicted RBP10.76□□□□□ -0.69
PCGF1-206ENST00000489914 HNRNPUQ00839 825 aaKnown RBP eCLIP10.76□□□□□ -0.69
PCGF1-206ENST00000489914 THEMISQ8N1K5 641 aaPredicted RBP10.76□□□□□ -0.69
PCGF1-206ENST00000489914 SETD5Q9C0A6 1442 aa10.75□□□□□ -0.69
PCGF1-206ENST00000489914 ATP7AQ04656 1500 aa10.75□□□□□ -0.69
PCGF1-206ENST00000489914 MAP3K1Q13233 1512 aa10.75□□□□□ -0.69
PCGF1-206ENST00000489914 LRRC7Q96NW7 1537 aa10.75□□□□□ -0.69
PCGF1-206ENST00000489914 DDRGK1Q96HY6 314 aa10.74□□□□□ -0.69
PCGF1-206ENST00000489914 FAM43AQ8N2R8 423 aa10.73□□□□□ -0.69
PCGF1-206ENST00000489914 IL27Q8NEV9 243 aa10.73□□□□□ -0.69
PCGF1-206ENST00000489914 DAXXQ9UER7 740 aaPredicted RBP10.73□□□□□ -0.69
PCGF1-206ENST00000489914 ZBED9Q6R2W3 1325 aa10.73□□□□□ -0.69
PCGF1-206ENST00000489914 ARHGAP35Q9NRY4 1499 aa10.73□□□□□ -0.69
PCGF1-206ENST00000489914 RNF17Q9BXT8 1623 aaKnown RBP10.73□□□□□ -0.69
PCGF1-206ENST00000489914 IQGAP1P46940 1657 aa10.73□□□□□ -0.69
PCGF1-206ENST00000489914 KIF3BO15066 747 aa10.72□□□□□ -0.69
PCGF1-206ENST00000489914 RAB3GAP2Q9H2M9 1393 aa10.72□□□□□ -0.69
PCGF1-206ENST00000489914 PLXNC1O60486 1568 aa10.72□□□□□ -0.69
PCGF1-206ENST00000489914 PAK3O75914 559 aaPredicted RBP10.71□□□□□ -0.69
PCGF1-206ENST00000489914 UPF1Q92900 1129 aaKnown RBP eCLIP10.71□□□□□ -0.69
PCGF1-206ENST00000489914 CFDP1Q9UEE9 299 aaPredicted RBP10.71□□□□□ -0.69
PCGF1-206ENST00000489914 UGGT1Q9NYU2 1555 aa10.7□□□□□ -0.7
PCGF1-206ENST00000489914 FAM135AQ9P2D6 1515 aa10.7□□□□□ -0.7
PCGF1-206ENST00000489914 TCERG1O14776 1098 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms