RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 NBR1Q14596 966 aa9.06□□□□□ -0.96
NF1-213ENST00000489712 RNF166Q96A37 237 aaPredicted RBP9.06□□□□□ -0.96
NF1-213ENST00000489712 PPP1R3GB7ZBB8 358 aa9.05□□□□□ -0.96
NF1-213ENST00000489712 ARHGEF1Q92888 912 aaKnown RBP9.05□□□□□ -0.96
NF1-213ENST00000489712 SLC4A5Q9BY07 1137 aa9.03□□□□□ -0.96
NF1-213ENST00000489712 VPS9D1Q9Y2B5 631 aa9.03□□□□□ -0.96
NF1-213ENST00000489712 EN1Q05925 392 aaPredicted RBP9.02□□□□□ -0.97
NF1-213ENST00000489712 RBM33Q96EV2 1170 aaKnown RBP9.02□□□□□ -0.97
NF1-213ENST00000489712 ZBED2Q9BTP6 218 aa9.02□□□□□ -0.97
NF1-213ENST00000489712 GRXCR2A6NFK2 248 aa9.01□□□□□ -0.97
NF1-213ENST00000489712 MAP3K7O43318 606 aa9.01□□□□□ -0.97
NF1-213ENST00000489712 HRO43593 1189 aa9□□□□□ -0.97
NF1-213ENST00000489712 C6orf132Q5T0Z8 1188 aa9□□□□□ -0.97
NF1-213ENST00000489712 STAC3Q96MF2 364 aa9□□□□□ -0.97
NF1-213ENST00000489712 COL9A1P20849 921 aa8.99□□□□□ -0.97
NF1-213ENST00000489712 NBPF3Q9H094 633 aa8.98□□□□□ -0.97
NF1-213ENST00000489712 TSR1Q2NL82 804 aaKnown RBP8.96□□□□□ -0.98
NF1-213ENST00000489712 PROX2Q3B8N5 592 aa8.96□□□□□ -0.98
NF1-213ENST00000489712 OSBPP22059 807 aa8.94□□□□□ -0.98
NF1-213ENST00000489712 VSIG10Q8N0Z9 540 aa8.94□□□□□ -0.98
NF1-213ENST00000489712 PRIM1P49642 420 aaKnown RBP8.93□□□□□ -0.98
NF1-213ENST00000489712 MRPL50Q8N5N7 158 aaKnown RBP8.93□□□□□ -0.98
NF1-213ENST00000489712 RABGEF1Q9UJ41 708 aa8.93□□□□□ -0.98
NF1-213ENST00000489712 KDM2AQ9Y2K7 1162 aa8.93□□□□□ -0.98
NF1-213ENST00000489712 BHMG1C9JSJ3 638 aaPredicted RBP8.92□□□□□ -0.98
NF1-213ENST00000489712 MLLT3P42568 568 aaPredicted RBP8.92□□□□□ -0.98
NF1-213ENST00000489712 CERKQ8TCT0 537 aa8.92□□□□□ -0.98
NF1-213ENST00000489712 GOLGA8CPA6NN73 597 aa8.91□□□□□ -0.98
NF1-213ENST00000489712 TRIM6-TRIM34B2RNG4 842 aa8.91□□□□□ -0.98
NF1-213ENST00000489712 ONECUT3O60422 494 aaPredicted RBP8.91□□□□□ -0.98
NF1-213ENST00000489712 KCTD12Q96CX2 325 aaKnown RBP8.91□□□□□ -0.98
NF1-213ENST00000489712 CDHR5Q9HBB8 845 aa8.9□□□□□ -0.98
NF1-213ENST00000489712 KIAA1468Q9P260 1216 aa8.89□□□□□ -0.99
NF1-213ENST00000489712 SEMA3EO15041 775 aa8.88□□□□□ -0.99
NF1-213ENST00000489712 HCSTQ9UBK5 93 aa8.88□□□□□ -0.99
NF1-213ENST00000489712 LAPTM4BQ86VI4 370 aa8.87□□□□□ -0.99
NF1-213ENST00000489712 CDCA7LQ96GN5 454 aa8.87□□□□□ -0.99
NF1-213ENST00000489712 PRSS12P56730 875 aa8.86□□□□□ -0.99
NF1-213ENST00000489712 PACS2Q86VP3 889 aa8.86□□□□□ -0.99
NF1-213ENST00000489712 WNT2BQ93097 391 aa8.86□□□□□ -0.99
NF1-213ENST00000489712 RBM27Q9P2N5 1060 aaKnown RBP8.86□□□□□ -0.99
NF1-213ENST00000489712 ANKK1Q8NFD2 765 aa8.85□□□□□ -0.99
NF1-213ENST00000489712 SEPT9Q9UHD8 586 aaPredicted RBP8.85□□□□□ -0.99
NF1-213ENST00000489712 TSKSQ9UJT2 592 aa8.85□□□□□ -0.99
NF1-213ENST00000489712 TESPA1A2RU30 521 aaPredicted RBP8.84□□□□□ -0.99
NF1-213ENST00000489712 NBPF26B4DH59 902 aa8.84□□□□□ -0.99
NF1-213ENST00000489712 THSD4Q6ZMP0 1018 aa8.84□□□□□ -0.99
NF1-213ENST00000489712 FAM98CQ17RN3 349 aaKnown RBP8.83□□□□□ -1
NF1-213ENST00000489712 SMYD5Q6GMV2 418 aa8.83□□□□□ -1
NF1-213ENST00000489712 ZFRQ96KR1 1074 aaKnown RBP8.81□□□□□ -1
NF1-213ENST00000489712 NPDC1Q9NQX5 325 aaPredicted RBP8.81□□□□□ -1
NF1-213ENST00000489712 NUTM2FA1L443 756 aa8.8□□□□□ -1
NF1-213ENST00000489712 PTPN5P54829 565 aa8.8□□□□□ -1
NF1-213ENST00000489712 PADI6Q6TGC4 694 aa8.8□□□□□ -1
NF1-213ENST00000489712 FAM198AQ9UFP1 575 aa8.8□□□□□ -1
NF1-213ENST00000489712 PTGDRQ13258 359 aa8.79□□□□□ -1
NF1-213ENST00000489712 TTC13Q8NBP0 860 aa8.78□□□□□ -1
NF1-213ENST00000489712 PNMA3Q9UL41 463 aa8.78□□□□□ -1
NF1-213ENST00000489712 SOWAHBA6NEL2 793 aa8.77□□□□□ -1.01
NF1-213ENST00000489712 SMAPO00193 183 aa8.77□□□□□ -1.01
NF1-213ENST00000489712 FCHSD2O94868 740 aa8.77□□□□□ -1.01
NF1-213ENST00000489712 BCAMP50895 628 aa8.77□□□□□ -1.01
NF1-213ENST00000489712 TATDN2Q93075 761 aa8.77□□□□□ -1.01
NF1-213ENST00000489712 LRCH3Q96II8 777 aa8.77□□□□□ -1.01
NF1-213ENST00000489712 NUDT18Q6ZVK8 323 aa8.76□□□□□ -1.01
NF1-213ENST00000489712 TULP1O00294 542 aaPredicted RBP8.75□□□□□ -1.01
NF1-213ENST00000489712 RBM26Q5T8P6 1007 aaKnown RBP8.75□□□□□ -1.01
NF1-213ENST00000489712 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.75□□□□□ -1.01
NF1-213ENST00000489712 C3orf80F5H4A9 247 aa8.74□□□□□ -1.01
NF1-213ENST00000489712 HIC1Q14526 733 aa8.72□□□□□ -1.01
NF1-213ENST00000489712 NYAP1Q6ZVC0 841 aa8.72□□□□□ -1.01
NF1-213ENST00000489712 SAMD7Q7Z3H4 446 aa8.72□□□□□ -1.01
NF1-213ENST00000489712 PLA2G2EQ9NZK7 142 aa8.72□□□□□ -1.01
NF1-213ENST00000489712 TSR3Q9UJK0 312 aaKnown RBP8.71□□□□□ -1.02
NF1-213ENST00000489712 HPS5Q9UPZ3 1129 aa8.71□□□□□ -1.02
NF1-213ENST00000489712 GPIHBP1Q8IV16 184 aa8.7□□□□□ -1.02
NF1-213ENST00000489712 HDGFP51858 240 aaKnown RBP8.69□□□□□ -1.02
NF1-213ENST00000489712 RBM46Q8TBY0 533 aaKnown RBP8.69□□□□□ -1.02
NF1-213ENST00000489712 WBP1LQ9NX94 342 aa8.69□□□□□ -1.02
NF1-213ENST00000489712 ADGRG1Q9Y653 693 aa8.69□□□□□ -1.02
NF1-213ENST00000489712 GPR37O15354 613 aa8.68□□□□□ -1.02
NF1-213ENST00000489712 RNF40O75150 1001 aa8.68□□□□□ -1.02
NF1-213ENST00000489712 EYA1Q99502 592 aa8.68□□□□□ -1.02
NF1-213ENST00000489712 GNPATO15228 680 aa8.67□□□□□ -1.02
NF1-213ENST00000489712 DNAJB2P25686 324 aa8.67□□□□□ -1.02
NF1-213ENST00000489712 SLC4A3P48751 1232 aa8.67□□□□□ -1.02
NF1-213ENST00000489712 PPP4CP60510 307 aa8.67□□□□□ -1.02
NF1-213ENST00000489712 SWT1Q5T5J6 900 aaKnown RBP8.66□□□□□ -1.02
NF1-213ENST00000489712 SLF2Q8IX21 1173 aa8.66□□□□□ -1.02
NF1-213ENST00000489712 NECTIN2Q92692 538 aa8.66□□□□□ -1.02
NF1-213ENST00000489712 FAM161AQ3B820 660 aa8.64□□□□□ -1.03
NF1-213ENST00000489712 OATP04181 439 aa8.63□□□□□ -1.03
NF1-213ENST00000489712 TMEM134Q9H6X4 195 aa8.63□□□□□ -1.03
NF1-213ENST00000489712 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.62□□□□□ -1.03
NF1-213ENST00000489712 RCCD1A6NED2 376 aa8.61□□□□□ -1.03
NF1-213ENST00000489712 ITGBL1O95965 494 aaPredicted RBP8.61□□□□□ -1.03
NF1-213ENST00000489712 IFFO2Q5TF58 517 aa8.61□□□□□ -1.03
NF1-213ENST00000489712 PXYLP1Q8TE99 480 aa8.61□□□□□ -1.03
NF1-213ENST00000489712 FECHP22830 423 aa8.6□□□□□ -1.03
NF1-213ENST00000489712 METTL3Q86U44 580 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms