RNA–Protein interactions for RNA: ENST00000489196.1

CASD1-206, Transcript of CAS1 domain containing 1, humanhuman

TSL 3

Gene CASD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1-206ENST00000489196 PCDHGA10Q9Y5H3 936 aa7.33□□□□□ -1.24
CASD1-206ENST00000489196 FBXW7Q969H0 707 aa7.33□□□□□ -1.24
CASD1-206ENST00000489196 PPP1R3GB7ZBB8 358 aa7.32□□□□□ -1.24
CASD1-206ENST00000489196 PHF14O94880 888 aa7.32□□□□□ -1.24
CASD1-206ENST00000489196 TYW1BQ6NUM6 668 aa7.32□□□□□ -1.24
CASD1-206ENST00000489196 LAPTM4BQ86VI4 370 aa7.32□□□□□ -1.24
CASD1-206ENST00000489196 KCNC4Q03721 635 aa7.3□□□□□ -1.24
CASD1-206ENST00000489196 CAMK2BQ13554 666 aa7.3□□□□□ -1.24
CASD1-206ENST00000489196 BBXQ8WY36 941 aaPredicted RBP7.3□□□□□ -1.24
CASD1-206ENST00000489196 TRAF7Q6Q0C0 670 aa7.3□□□□□ -1.24
CASD1-206ENST00000489196 RABGEF1Q9UJ41 708 aa7.29□□□□□ -1.24
CASD1-206ENST00000489196 EPAS1Q99814 870 aa7.28□□□□□ -1.24
CASD1-206ENST00000489196 DPYSL4O14531 572 aa7.27□□□□□ -1.24
CASD1-206ENST00000489196 COL9A1P20849 921 aa7.27□□□□□ -1.25
CASD1-206ENST00000489196 PROX2Q3B8N5 592 aa7.27□□□□□ -1.25
CASD1-206ENST00000489196 ONECUT3O60422 494 aaPredicted RBP7.26□□□□□ -1.25
CASD1-206ENST00000489196 SOWAHBA6NEL2 793 aa7.25□□□□□ -1.25
CASD1-206ENST00000489196 C6orf132Q5T0Z8 1188 aa7.25□□□□□ -1.25
CASD1-206ENST00000489196 SPRYD3Q8NCJ5 442 aa7.25□□□□□ -1.25
CASD1-206ENST00000489196 NRG2O14511 850 aaPredicted RBP7.24□□□□□ -1.25
CASD1-206ENST00000489196 GFRA3O60609 400 aa7.24□□□□□ -1.25
CASD1-206ENST00000489196 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.24□□□□□ -1.25
CASD1-206ENST00000489196 KIAA1468Q9P260 1216 aa7.23□□□□□ -1.25
CASD1-206ENST00000489196 DDX12PQ92771 950 aa7.22□□□□□ -1.25
CASD1-206ENST00000489196 RBM33Q96EV2 1170 aaKnown RBP7.22□□□□□ -1.25
CASD1-206ENST00000489196 ZFRQ96KR1 1074 aaKnown RBP7.2□□□□□ -1.26
CASD1-206ENST00000489196 SPDYE16A6NNV3 312 aaPredicted RBP7.2□□□□□ -1.26
CASD1-206ENST00000489196 TRIM6-TRIM34B2RNG4 842 aa7.2□□□□□ -1.26
CASD1-206ENST00000489196 BCAMP50895 628 aa7.19□□□□□ -1.26
CASD1-206ENST00000489196 PDIA6Q15084 440 aa7.19□□□□□ -1.26
CASD1-206ENST00000489196 AMER1Q5JTC6 1135 aaPredicted RBP7.19□□□□□ -1.26
CASD1-206ENST00000489196 NBR1Q14596 966 aa7.18□□□□□ -1.26
CASD1-206ENST00000489196 FAM98CQ17RN3 349 aaKnown RBP7.18□□□□□ -1.26
CASD1-206ENST00000489196 SEPT9Q9UHD8 586 aaPredicted RBP7.18□□□□□ -1.26
CASD1-206ENST00000489196 MAP3K7O43318 606 aa7.18□□□□□ -1.26
CASD1-206ENST00000489196 EN1Q05925 392 aaPredicted RBP7.18□□□□□ -1.26
CASD1-206ENST00000489196 TSR3Q9UJK0 312 aaKnown RBP7.18□□□□□ -1.26
CASD1-206ENST00000489196 V9GY48 417 aaPredicted RBP7.18□□□□□ -1.26
CASD1-206ENST00000489196 E2F4Q16254 413 aa7.17□□□□□ -1.26
CASD1-206ENST00000489196 PACS2Q86VP3 889 aa7.17□□□□□ -1.26
CASD1-206ENST00000489196 WDR70Q9NW82 654 aa7.17□□□□□ -1.26
CASD1-206ENST00000489196 ZNF787Q6DD87 383 aa7.16□□□□□ -1.26
CASD1-206ENST00000489196 WBP1LQ9NX94 342 aa7.16□□□□□ -1.26
CASD1-206ENST00000489196 LCE2BO14633 110 aa7.15□□□□□ -1.27
CASD1-206ENST00000489196 TSR1Q2NL82 804 aaKnown RBP7.15□□□□□ -1.27
CASD1-206ENST00000489196 LRCH3Q96II8 777 aa7.15□□□□□ -1.27
CASD1-206ENST00000489196 CFAP44Q96MT7 982 aa7.15□□□□□ -1.27
CASD1-206ENST00000489196 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.15□□□□□ -1.27
CASD1-206ENST00000489196 PAXIP1Q6ZW49 1069 aaPredicted RBP7.14□□□□□ -1.27
CASD1-206ENST00000489196 ARIH1Q9Y4X5 557 aaPredicted RBP7.14□□□□□ -1.27
CASD1-206ENST00000489196 CERKQ8TCT0 537 aa7.13□□□□□ -1.27
CASD1-206ENST00000489196 PRKD2Q9BZL6 878 aa7.12□□□□□ -1.27
CASD1-206ENST00000489196 TSKSQ9UJT2 592 aa7.12□□□□□ -1.27
CASD1-206ENST00000489196 HPS5Q9UPZ3 1129 aa7.12□□□□□ -1.27
CASD1-206ENST00000489196 GRXCR2A6NFK2 248 aa7.11□□□□□ -1.27
CASD1-206ENST00000489196 CDCA7LQ96GN5 454 aa7.11□□□□□ -1.27
CASD1-206ENST00000489196 PRSS12P56730 875 aa7.1□□□□□ -1.27
CASD1-206ENST00000489196 RTN4Q9NQC3 1192 aaKnown RBP7.1□□□□□ -1.27
CASD1-206ENST00000489196 PPP4CP60510 307 aa7.09□□□□□ -1.27
CASD1-206ENST00000489196 IL21Q9HBE4 155 aa7.08□□□□□ -1.28
CASD1-206ENST00000489196 NBPF26B4DH59 902 aa7.07□□□□□ -1.28
CASD1-206ENST00000489196 ZNF775Q96BV0 537 aaPredicted RBP7.07□□□□□ -1.28
CASD1-206ENST00000489196 SMAPO00193 183 aa7.06□□□□□ -1.28
CASD1-206ENST00000489196 PRIM1P49642 420 aaKnown RBP7.06□□□□□ -1.28
CASD1-206ENST00000489196 SAMD7Q7Z3H4 446 aa7.06□□□□□ -1.28
CASD1-206ENST00000489196 TATDN2Q93075 761 aa7.06□□□□□ -1.28
CASD1-206ENST00000489196 OSBPP22059 807 aa7.06□□□□□ -1.28
CASD1-206ENST00000489196 HDGFP51858 240 aaKnown RBP7.06□□□□□ -1.28
CASD1-206ENST00000489196 PNMA3Q9UL41 463 aa7.06□□□□□ -1.28
CASD1-206ENST00000489196 GGCXP38435 758 aa7.05□□□□□ -1.28
CASD1-206ENST00000489196 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.05□□□□□ -1.28
CASD1-206ENST00000489196 FAM198AQ9UFP1 575 aa7.05□□□□□ -1.28
CASD1-206ENST00000489196 PDZRN3Q9UPQ7 1066 aa7.05□□□□□ -1.28
CASD1-206ENST00000489196 TJAP1Q5JTD0 557 aa7.05□□□□□ -1.28
CASD1-206ENST00000489196 RBM27Q9P2N5 1060 aaKnown RBP7.05□□□□□ -1.28
CASD1-206ENST00000489196 NECTIN2Q92692 538 aa7.03□□□□□ -1.28
CASD1-206ENST00000489196 CDHR5Q9HBB8 845 aa7.03□□□□□ -1.28
CASD1-206ENST00000489196 PPP1R18Q6NYC8 613 aa7.02□□□□□ -1.29
CASD1-206ENST00000489196 NUDT18Q6ZVK8 323 aa7.02□□□□□ -1.29
CASD1-206ENST00000489196 C3orf80F5H4A9 247 aa7.01□□□□□ -1.29
CASD1-206ENST00000489196 TMUB1Q9BVT8 246 aa7.01□□□□□ -1.29
CASD1-206ENST00000489196 RNF40O75150 1001 aa7□□□□□ -1.29
CASD1-206ENST00000489196 MTRQ99707 1265 aa6.99□□□□□ -1.29
CASD1-206ENST00000489196 DGAT1O75907 488 aa6.99□□□□□ -1.29
CASD1-206ENST00000489196 SLC4A3P48751 1232 aa6.98□□□□□ -1.29
CASD1-206ENST00000489196 TTC13Q8NBP0 860 aa6.98□□□□□ -1.29
CASD1-206ENST00000489196 ARHGEF1Q92888 912 aaKnown RBP6.98□□□□□ -1.29
CASD1-206ENST00000489196 NPDC1Q9NQX5 325 aaPredicted RBP6.98□□□□□ -1.29
CASD1-206ENST00000489196 PADI6Q6TGC4 694 aa6.98□□□□□ -1.29
CASD1-206ENST00000489196 SLF2Q8IX21 1173 aa6.97□□□□□ -1.29
CASD1-206ENST00000489196 SWT1Q5T5J6 900 aaKnown RBP6.96□□□□□ -1.3
CASD1-206ENST00000489196 APLP1P51693 650 aa6.95□□□□□ -1.3
CASD1-206ENST00000489196 TSHZ2Q9NRE2 1034 aa6.95□□□□□ -1.3
CASD1-206ENST00000489196 PKDCCQ504Y2 493 aa6.94□□□□□ -1.3
CASD1-206ENST00000489196 ZNF516Q92618 1163 aa6.93□□□□□ -1.3
CASD1-206ENST00000489196 EYA1Q99502 592 aa6.93□□□□□ -1.3
CASD1-206ENST00000489196 MLLT3P42568 568 aaPredicted RBP6.93□□□□□ -1.3
CASD1-206ENST00000489196 TREML4Q6UXN2 200 aa6.93□□□□□ -1.3
CASD1-206ENST00000489196 PRR14Q9BWN1 585 aa6.92□□□□□ -1.3
CASD1-206ENST00000489196 PRR20EP86478 221 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms