RNA–Protein interactions for RNA: ENST00000489049.5

PDCD4-209, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-209ENST00000489049 STAC3Q96MF2 364 aa10.88□□□□□ -0.67
PDCD4-209ENST00000489049 SLC4A5Q9BY07 1137 aa10.88□□□□□ -0.67
PDCD4-209ENST00000489049 SMARCA2P51531 1590 aa10.86□□□□□ -0.67
PDCD4-209ENST00000489049 ZDHHC16Q969W1 377 aa10.86□□□□□ -0.67
PDCD4-209ENST00000489049 KCTD12Q96CX2 325 aaKnown RBP10.86□□□□□ -0.67
PDCD4-209ENST00000489049 ADAM33Q9BZ11 813 aa10.85□□□□□ -0.67
PDCD4-209ENST00000489049 ZBED2Q9BTP6 218 aa10.84□□□□□ -0.67
PDCD4-209ENST00000489049 BBXQ8WY36 941 aaPredicted RBP10.83□□□□□ -0.68
PDCD4-209ENST00000489049 PLA2G2EQ9NZK7 142 aa10.83□□□□□ -0.68
PDCD4-209ENST00000489049 BHMG1C9JSJ3 638 aaPredicted RBP10.81□□□□□ -0.68
PDCD4-209ENST00000489049 CAMK2BQ13554 666 aa10.81□□□□□ -0.68
PDCD4-209ENST00000489049 PCDHGA10Q9Y5H3 936 aa10.8□□□□□ -0.68
PDCD4-209ENST00000489049 ATAD2BQ9ULI0 1458 aa10.8□□□□□ -0.68
PDCD4-209ENST00000489049 CCDC88BA6NC98 1476 aa10.79□□□□□ -0.68
PDCD4-209ENST00000489049 PPP1R3GB7ZBB8 358 aa10.76□□□□□ -0.69
PDCD4-209ENST00000489049 PHF14O94880 888 aa10.76□□□□□ -0.69
PDCD4-209ENST00000489049 DPYSL4O14531 572 aa10.75□□□□□ -0.69
PDCD4-209ENST00000489049 SLC24A1O60721 1099 aa10.75□□□□□ -0.69
PDCD4-209ENST00000489049 TYW1BQ6NUM6 668 aa10.75□□□□□ -0.69
PDCD4-209ENST00000489049 MRPL50Q8N5N7 158 aaKnown RBP10.75□□□□□ -0.69
PDCD4-209ENST00000489049 FBXW7Q969H0 707 aa10.75□□□□□ -0.69
PDCD4-209ENST00000489049 NCAPD3P42695 1498 aa10.74□□□□□ -0.69
PDCD4-209ENST00000489049 BAZ1BQ9UIG0 1483 aaKnown RBP10.74□□□□□ -0.69
PDCD4-209ENST00000489049 NBPF3Q9H094 633 aa10.74□□□□□ -0.69
PDCD4-209ENST00000489049 PTPN5P54829 565 aa10.73□□□□□ -0.69
PDCD4-209ENST00000489049 THSD4Q6ZMP0 1018 aa10.73□□□□□ -0.69
PDCD4-209ENST00000489049 HMGXB3Q12766 1538 aa10.73□□□□□ -0.69
PDCD4-209ENST00000489049 EIF4G1Q04637 1599 aaKnown RBP10.73□□□□□ -0.69
PDCD4-209ENST00000489049 GOLGA8CPA6NN73 597 aa10.72□□□□□ -0.69
PDCD4-209ENST00000489049 COL9A1P20849 921 aa10.72□□□□□ -0.69
PDCD4-209ENST00000489049 SPRYD3Q8NCJ5 442 aa10.71□□□□□ -0.69
PDCD4-209ENST00000489049 WNT2BQ93097 391 aa10.71□□□□□ -0.69
PDCD4-209ENST00000489049 PROX2Q3B8N5 592 aa10.7□□□□□ -0.7
PDCD4-209ENST00000489049 EPAS1Q99814 870 aa10.7□□□□□ -0.7
PDCD4-209ENST00000489049 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.69□□□□□ -0.7
PDCD4-209ENST00000489049 RABGEF1Q9UJ41 708 aa10.69□□□□□ -0.7
PDCD4-209ENST00000489049 C6orf132Q5T0Z8 1188 aa10.66□□□□□ -0.7
PDCD4-209ENST00000489049 EEA1Q15075 1411 aa10.65□□□□□ -0.7
PDCD4-209ENST00000489049 DDX12PQ92771 950 aa10.64□□□□□ -0.71
PDCD4-209ENST00000489049 PDIA6Q15084 440 aa10.63□□□□□ -0.71
PDCD4-209ENST00000489049 RBM33Q96EV2 1170 aaKnown RBP10.63□□□□□ -0.71
PDCD4-209ENST00000489049 ONECUT3O60422 494 aaPredicted RBP10.62□□□□□ -0.71
PDCD4-209ENST00000489049 KIAA1468Q9P260 1216 aa10.62□□□□□ -0.71
PDCD4-209ENST00000489049 IFFO2Q5TF58 517 aa10.61□□□□□ -0.71
PDCD4-209ENST00000489049 PAXIP1Q6ZW49 1069 aaPredicted RBP10.61□□□□□ -0.71
PDCD4-209ENST00000489049 LAPTM4BQ86VI4 370 aa10.61□□□□□ -0.71
PDCD4-209ENST00000489049 ANKK1Q8NFD2 765 aa10.61□□□□□ -0.71
PDCD4-209ENST00000489049 CFAP44Q96MT7 982 aa10.61□□□□□ -0.71
PDCD4-209ENST00000489049 SPDYE16A6NNV3 312 aaPredicted RBP10.6□□□□□ -0.71
PDCD4-209ENST00000489049 TRIM6-TRIM34B2RNG4 842 aa10.59□□□□□ -0.71
PDCD4-209ENST00000489049 EN1Q05925 392 aaPredicted RBP10.59□□□□□ -0.71
PDCD4-209ENST00000489049 NBR1Q14596 966 aa10.59□□□□□ -0.71
PDCD4-209ENST00000489049 E2F4Q16254 413 aa10.59□□□□□ -0.71
PDCD4-209ENST00000489049 BCAMP50895 628 aa10.57□□□□□ -0.72
PDCD4-209ENST00000489049 ZFRQ96KR1 1074 aaKnown RBP10.57□□□□□ -0.72
PDCD4-209ENST00000489049 WRNQ14191 1432 aaPredicted RBP eCLIP10.57□□□□□ -0.72
PDCD4-209ENST00000489049 SOWAHBA6NEL2 793 aa10.56□□□□□ -0.72
PDCD4-209ENST00000489049 MAP3K7O43318 606 aa10.56□□□□□ -0.72
PDCD4-209ENST00000489049 SEPT9Q9UHD8 586 aaPredicted RBP10.56□□□□□ -0.72
PDCD4-209ENST00000489049 ARIH1Q9Y4X5 557 aaPredicted RBP10.56□□□□□ -0.72
PDCD4-209ENST00000489049 TSR1Q2NL82 804 aaKnown RBP10.55□□□□□ -0.72
PDCD4-209ENST00000489049 WDR70Q9NW82 654 aa10.55□□□□□ -0.72
PDCD4-209ENST00000489049 LOC105371045A0A1W2PR82 267 aa10.54□□□□□ -0.72
PDCD4-209ENST00000489049 FAM98CQ17RN3 349 aaKnown RBP10.53□□□□□ -0.72
PDCD4-209ENST00000489049 A0A0G2JS52 829 aa10.52□□□□□ -0.73
PDCD4-209ENST00000489049 TSKSQ9UJT2 592 aa10.52□□□□□ -0.73
PDCD4-209ENST00000489049 CFTRP13569 1480 aa10.52□□□□□ -0.73
PDCD4-209ENST00000489049 PRIM1P49642 420 aaKnown RBP10.5□□□□□ -0.73
PDCD4-209ENST00000489049 ABCC8Q09428 1581 aa10.5□□□□□ -0.73
PDCD4-209ENST00000489049 GRXCR2A6NFK2 248 aa10.49□□□□□ -0.73
PDCD4-209ENST00000489049 RGS20O76081 388 aa10.49□□□□□ -0.73
PDCD4-209ENST00000489049 ITGBL1O95965 494 aaPredicted RBP10.49□□□□□ -0.73
PDCD4-209ENST00000489049 NYAP1Q6ZVC0 841 aa10.49□□□□□ -0.73
PDCD4-209ENST00000489049 PACS2Q86VP3 889 aa10.49□□□□□ -0.73
PDCD4-209ENST00000489049 WBP1LQ9NX94 342 aa10.49□□□□□ -0.73
PDCD4-209ENST00000489049 LRCH3Q96II8 777 aa10.47□□□□□ -0.73
PDCD4-209ENST00000489049 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.47□□□□□ -0.73
PDCD4-209ENST00000489049 CDCA7LQ96GN5 454 aa10.46□□□□□ -0.73
PDCD4-209ENST00000489049 CADPSQ9ULU8 1353 aa10.46□□□□□ -0.74
PDCD4-209ENST00000489049 TOP2BQ02880 1626 aa10.46□□□□□ -0.74
PDCD4-209ENST00000489049 CC2D2AQ9P2K1 1620 aa10.46□□□□□ -0.74
PDCD4-209ENST00000489049 PRSS12P56730 875 aa10.45□□□□□ -0.74
PDCD4-209ENST00000489049 FAM9AQ8IZU1 332 aaPredicted RBP10.45□□□□□ -0.74
PDCD4-209ENST00000489049 CERKQ8TCT0 537 aa10.45□□□□□ -0.74
PDCD4-209ENST00000489049 TSR3Q9UJK0 312 aaKnown RBP10.45□□□□□ -0.74
PDCD4-209ENST00000489049 HPS5Q9UPZ3 1129 aa10.45□□□□□ -0.74
PDCD4-209ENST00000489049 OSBPP22059 807 aa10.44□□□□□ -0.74
PDCD4-209ENST00000489049 FAM198AQ9UFP1 575 aa10.44□□□□□ -0.74
PDCD4-209ENST00000489049 BIVM-ERCC5R4GMW8 1640 aa10.43□□□□□ -0.74
PDCD4-209ENST00000489049 TNIKQ9UKE5 1360 aa10.42□□□□□ -0.74
PDCD4-209ENST00000489049 PRDM2Q13029 1718 aa10.42□□□□□ -0.74
PDCD4-209ENST00000489049 CDHR5Q9HBB8 845 aa10.42□□□□□ -0.74
PDCD4-209ENST00000489049 SYNJ1O43426 1573 aa10.41□□□□□ -0.74
PDCD4-209ENST00000489049 SMAPO00193 183 aa10.41□□□□□ -0.74
PDCD4-209ENST00000489049 NBPF26B4DH59 902 aa10.4□□□□□ -0.74
PDCD4-209ENST00000489049 CEP164Q9UPV0 1460 aa10.4□□□□□ -0.74
PDCD4-209ENST00000489049 SOGA1O94964 1423 aa10.4□□□□□ -0.75
PDCD4-209ENST00000489049 GOLGA3Q08378 1498 aa10.39□□□□□ -0.75
PDCD4-209ENST00000489049 C3orf80F5H4A9 247 aa10.39□□□□□ -0.75
PDCD4-209ENST00000489049 KCNC4Q03721 635 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms