RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 POTEJP0CG39 1038 aa14.14□□□□□ -0.15
TRAPPC12-221ENST00000489032 MLLT3P42568 568 aaPredicted RBP14.14□□□□□ -0.15
TRAPPC12-221ENST00000489032 ABCC8Q09428 1581 aa14.13□□□□□ -0.15
TRAPPC12-221ENST00000489032 EVI5O60447 810 aa14.13□□□□□ -0.15
TRAPPC12-221ENST00000489032 GRXCR2A6NFK2 248 aa14.12□□□□□ -0.15
TRAPPC12-221ENST00000489032 RIMBP2O15034 1052 aa14.11□□□□□ -0.15
TRAPPC12-221ENST00000489032 DOK7Q18PE1 504 aa14.11□□□□□ -0.15
TRAPPC12-221ENST00000489032 TARBP1Q13395 1621 aaKnown RBP14.08□□□□□ -0.15
TRAPPC12-221ENST00000489032 CLASP1Q7Z460 1538 aa14.07□□□□□ -0.16
TRAPPC12-221ENST00000489032 PCDHGA4Q9Y5G9 962 aa14.07□□□□□ -0.16
TRAPPC12-221ENST00000489032 DNMBPQ6XZF7 1577 aa14.07□□□□□ -0.16
TRAPPC12-221ENST00000489032 ZNF710Q8N1W2 664 aa14.06□□□□□ -0.16
TRAPPC12-221ENST00000489032 RBM26Q5T8P6 1007 aaKnown RBP14.05□□□□□ -0.16
TRAPPC12-221ENST00000489032 DDX12PQ92771 950 aa14.05□□□□□ -0.16
TRAPPC12-221ENST00000489032 CCDC88BA6NC98 1476 aa14.05□□□□□ -0.16
TRAPPC12-221ENST00000489032 PTGER2P43116 358 aa14.04□□□□□ -0.16
TRAPPC12-221ENST00000489032 GPIHBP1Q8IV16 184 aa14.04□□□□□ -0.16
TRAPPC12-221ENST00000489032 SYNJ1O43426 1573 aa14.04□□□□□ -0.16
TRAPPC12-221ENST00000489032 SNPHO15079 494 aa14.03□□□□□ -0.16
TRAPPC12-221ENST00000489032 ZC3H15Q8WU90 426 aaKnown RBP14.03□□□□□ -0.16
TRAPPC12-221ENST00000489032 CHMP7Q8WUX9 453 aaPredicted RBP14.01□□□□□ -0.17
TRAPPC12-221ENST00000489032 ANO8Q9HCE9 1232 aaPredicted RBP13.99□□□□□ -0.17
TRAPPC12-221ENST00000489032 ZSWIM6Q9HCJ5 1215 aa13.99□□□□□ -0.17
TRAPPC12-221ENST00000489032 GAPVD1Q14C86 1478 aa13.99□□□□□ -0.17
TRAPPC12-221ENST00000489032 SNAPC4Q5SXM2 1469 aa13.99□□□□□ -0.17
TRAPPC12-221ENST00000489032 POLA1P09884 1462 aaPredicted RBP13.98□□□□□ -0.17
TRAPPC12-221ENST00000489032 NUTM2FA1L443 756 aa13.97□□□□□ -0.17
TRAPPC12-221ENST00000489032 TDRD9Q8NDG6 1382 aaKnown RBP13.96□□□□□ -0.17
TRAPPC12-221ENST00000489032 ARSIQ5FYB1 569 aa13.96□□□□□ -0.17
TRAPPC12-221ENST00000489032 LHX8Q68G74 356 aa13.96□□□□□ -0.17
TRAPPC12-221ENST00000489032 HOXB3P14651 431 aaPredicted RBP13.95□□□□□ -0.18
TRAPPC12-221ENST00000489032 MAGI1Q96QZ7 1491 aaPredicted RBP13.94□□□□□ -0.18
TRAPPC12-221ENST00000489032 PHF14O94880 888 aa13.94□□□□□ -0.18
TRAPPC12-221ENST00000489032 OSBPP22059 807 aa13.94□□□□□ -0.18
TRAPPC12-221ENST00000489032 EPAS1Q99814 870 aa13.94□□□□□ -0.18
TRAPPC12-221ENST00000489032 RAD54L2Q9Y4B4 1467 aa13.93□□□□□ -0.18
TRAPPC12-221ENST00000489032 NUDT7P0C024 238 aa13.93□□□□□ -0.18
TRAPPC12-221ENST00000489032 WDR97A6NE52 1622 aa13.93□□□□□ -0.18
TRAPPC12-221ENST00000489032 SOGA1O94964 1423 aa13.92□□□□□ -0.18
TRAPPC12-221ENST00000489032 KRI1Q8N9T8 703 aaKnown RBP13.91□□□□□ -0.18
TRAPPC12-221ENST00000489032 OTUD5Q96G74 571 aa13.91□□□□□ -0.18
TRAPPC12-221ENST00000489032 SYNJ2O15056 1496 aa13.9□□□□□ -0.18
TRAPPC12-221ENST00000489032 ZMYND10O75800 440 aa13.89□□□□□ -0.19
TRAPPC12-221ENST00000489032 KHSRPQ92945 711 aaKnown RBP eCLIP13.89□□□□□ -0.196e-11■■■□□ 18.6
TRAPPC12-221ENST00000489032 MAP3K7O43318 606 aa13.88□□□□□ -0.19
TRAPPC12-221ENST00000489032 TYW1BQ6NUM6 668 aa13.88□□□□□ -0.19
TRAPPC12-221ENST00000489032 GPR153Q6NV75 609 aa13.88□□□□□ -0.19
TRAPPC12-221ENST00000489032 GRIN2BQ13224 1484 aa13.87□□□□□ -0.19
TRAPPC12-221ENST00000489032 FBXW7Q969H0 707 aa13.87□□□□□ -0.19
TRAPPC12-221ENST00000489032 JPH4Q96JJ6 628 aa13.87□□□□□ -0.19
TRAPPC12-221ENST00000489032 ZNF454Q8N9F8 522 aa13.86□□□□□ -0.19
TRAPPC12-221ENST00000489032 RBM33Q96EV2 1170 aaKnown RBP13.86□□□□□ -0.19
TRAPPC12-221ENST00000489032 PCDHGA10Q9Y5H3 936 aa13.86□□□□□ -0.19
TRAPPC12-221ENST00000489032 FCHSD2O94868 740 aa13.85□□□□□ -0.19
TRAPPC12-221ENST00000489032 BARGINQ6ZT62 677 aa13.85□□□□□ -0.19
TRAPPC12-221ENST00000489032 KIF13AQ9H1H9 1805 aa13.85□□□□□ -0.19
TRAPPC12-221ENST00000489032 EN1Q05925 392 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC12-221ENST00000489032 SLC24A3Q9HC58 644 aa13.84□□□□□ -0.19
TRAPPC12-221ENST00000489032 KDM4FA0A1W2PPD8 638 aa13.83□□□□□ -0.2
TRAPPC12-221ENST00000489032 PSDA5PKW4 1024 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC12-221ENST00000489032 ZDHHC16Q969W1 377 aa13.82□□□□□ -0.2
TRAPPC12-221ENST00000489032 FOSBP53539 338 aa13.81□□□□□ -0.2
TRAPPC12-221ENST00000489032 FGD5Q6ZNL6 1462 aa13.8□□□□□ -0.2
TRAPPC12-221ENST00000489032 HOXB1P14653 301 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC12-221ENST00000489032 HIC1Q14526 733 aa13.8□□□□□ -0.2
TRAPPC12-221ENST00000489032 LHX6Q9UPM6 363 aa13.8□□□□□ -0.2
TRAPPC12-221ENST00000489032 PPP4R3BQ5MIZ7 849 aa13.79□□□□□ -0.2
TRAPPC12-221ENST00000489032 ERCC6L2Q5T890 1561 aa13.79□□□□□ -0.2
TRAPPC12-221ENST00000489032 GNPATO15228 680 aa13.78□□□□□ -0.2
TRAPPC12-221ENST00000489032 PRIM1P49642 420 aaKnown RBP13.77□□□□□ -0.21
TRAPPC12-221ENST00000489032 PBRM1Q86U86 1689 aa13.77□□□□□ -0.21
TRAPPC12-221ENST00000489032 AK7Q96M32 723 aa13.77□□□□□ -0.21
TRAPPC12-221ENST00000489032 PTGDRQ13258 359 aa13.75□□□□□ -0.21
TRAPPC12-221ENST00000489032 GPR37O15354 613 aa13.74□□□□□ -0.21
TRAPPC12-221ENST00000489032 CEP170Q5SW79 1584 aa13.74□□□□□ -0.21
TRAPPC12-221ENST00000489032 MINK1Q8N4C8 1332 aaPredicted RBP13.73□□□□□ -0.21
TRAPPC12-221ENST00000489032 TSR1Q2NL82 804 aaKnown RBP13.73□□□□□ -0.21
TRAPPC12-221ENST00000489032 C6orf132Q5T0Z8 1188 aa13.73□□□□□ -0.21
TRAPPC12-221ENST00000489032 CERKQ8TCT0 537 aa13.73□□□□□ -0.21
TRAPPC12-221ENST00000489032 FAM69CQ0P6D2 419 aa13.72□□□□□ -0.21
TRAPPC12-221ENST00000489032 CDHR5Q9HBB8 845 aa13.72□□□□□ -0.21
TRAPPC12-221ENST00000489032 MAP2K5Q13163 448 aa13.71□□□□□ -0.21
TRAPPC12-221ENST00000489032 ADAM33Q9BZ11 813 aa13.7□□□□□ -0.22
TRAPPC12-221ENST00000489032 KDM6BO15054 1643 aa13.7□□□□□ -0.22
TRAPPC12-221ENST00000489032 ABCC10Q5T3U5 1492 aa13.69□□□□□ -0.22
TRAPPC12-221ENST00000489032 KCNH8Q96L42 1107 aa13.69□□□□□ -0.22
TRAPPC12-221ENST00000489032 CUX1P39880 1505 aa13.69□□□□□ -0.22
TRAPPC12-221ENST00000489032 GRIN2AQ12879 1464 aa13.68□□□□□ -0.22
TRAPPC12-221ENST00000489032 NEUROD2Q15784 382 aa13.68□□□□□ -0.22
TRAPPC12-221ENST00000489032 SHROOM2Q13796 1616 aa13.67□□□□□ -0.22
TRAPPC12-221ENST00000489032 ERBB3P21860 1342 aa13.66□□□□□ -0.22
TRAPPC12-221ENST00000489032 NUP160Q12769 1436 aa13.66□□□□□ -0.22
TRAPPC12-221ENST00000489032 IRF6O14896 467 aa13.66□□□□□ -0.22
TRAPPC12-221ENST00000489032 PTPREP23469 700 aa13.66□□□□□ -0.22
TRAPPC12-221ENST00000489032 NPDC1Q9NQX5 325 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC12-221ENST00000489032 FECHP22830 423 aa13.65□□□□□ -0.22
TRAPPC12-221ENST00000489032 BCL2L12Q9HB09 334 aa13.65□□□□□ -0.22
TRAPPC12-221ENST00000489032 ABCA5Q8WWZ7 1642 aa13.64□□□□□ -0.23
TRAPPC12-221ENST00000489032 ST18O60284 1047 aa13.63□□□□□ -0.23
TRAPPC12-221ENST00000489032 CCDC102AQ96A19 550 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms