RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 KDM5DQ9BY66 1539 aa26.17■■□□□ 1.78
HMG20B-213ENST00000488973 IPO9Q96P70 1041 aaKnown RBP26.17■■□□□ 1.78
HMG20B-213ENST00000488973 SHANK2Q9UPX8 1470 aa26.16■■□□□ 1.78
HMG20B-213ENST00000488973 CDC42BPAQ5VT25 1732 aa26.15■■□□□ 1.78
HMG20B-213ENST00000488973 CARD11Q9BXL7 1154 aa26.15■■□□□ 1.78
HMG20B-213ENST00000488973 CLASP1Q7Z460 1538 aa26.14■■□□□ 1.78
HMG20B-213ENST00000488973 MYBBP1AQ9BQG0 1328 aaKnown RBP26.14■■□□□ 1.77
HMG20B-213ENST00000488973 RALBP1Q15311 655 aa26.14■■□□□ 1.77
HMG20B-213ENST00000488973 ZNF777Q9ULD5 760 aaPredicted RBP26.12■■□□□ 1.77
HMG20B-213ENST00000488973 PLEKHD1A6NEE1 506 aa26.12■■□□□ 1.77
HMG20B-213ENST00000488973 NUP155O75694 1391 aa26.1■■□□□ 1.77
HMG20B-213ENST00000488973 NBR1Q14596 966 aa26.06■■□□□ 1.76
HMG20B-213ENST00000488973 ZBTB47Q9UFB7 747 aaPredicted RBP26.06■■□□□ 1.76
HMG20B-213ENST00000488973 C9orf84Q5VXU9 1444 aa26.06■■□□□ 1.76
HMG20B-213ENST00000488973 ST20-MTHFSA0A0A6YYL1 179 aa26.06■■□□□ 1.76
HMG20B-213ENST00000488973 RRP1P56182 461 aaKnown RBP26.06■■□□□ 1.76
HMG20B-213ENST00000488973 ABCC10Q5T3U5 1492 aa26.03■■□□□ 1.76
HMG20B-213ENST00000488973 EIF5BO60841 1220 aaKnown RBP26.03■■□□□ 1.76
HMG20B-213ENST00000488973 ERCC6L2Q5T890 1561 aa26.03■■□□□ 1.76
HMG20B-213ENST00000488973 PDE3BQ13370 1112 aa26■■□□□ 1.75
HMG20B-213ENST00000488973 SENP3-EIF4A1A0A087X0R7 540 aa26■■□□□ 1.75
HMG20B-213ENST00000488973 TRPM1Q7Z4N2 1603 aa25.99■■□□□ 1.75
HMG20B-213ENST00000488973 TCERG1O14776 1098 aaKnown RBP25.99■■□□□ 1.75
HMG20B-213ENST00000488973 PARD3Q8TEW0 1356 aa25.99■■□□□ 1.75
HMG20B-213ENST00000488973 RCAN3Q9UKA8 241 aa25.98■■□□□ 1.75
HMG20B-213ENST00000488973 ABCC2Q92887 1545 aa25.98■■□□□ 1.75
HMG20B-213ENST00000488973 SLC24A1O60721 1099 aa25.98■■□□□ 1.75
HMG20B-213ENST00000488973 ARHGEF5Q12774 1597 aa25.98■■□□□ 1.75
HMG20B-213ENST00000488973 NLRP13Q86W25 1043 aa25.97■■□□□ 1.75
HMG20B-213ENST00000488973 DCAF11Q8TEB1 546 aa25.97■■□□□ 1.75
HMG20B-213ENST00000488973 KDM2AQ9Y2K7 1162 aa25.97■■□□□ 1.75
HMG20B-213ENST00000488973 EXOC6Q8TAG9 804 aa25.95■■□□□ 1.75
HMG20B-213ENST00000488973 TSPY4P0CV99 314 aa25.95■■□□□ 1.74
HMG20B-213ENST00000488973 TSPY10P0CW01 314 aa25.95■■□□□ 1.74
HMG20B-213ENST00000488973 RTL5Q5HYW3 569 aaPredicted RBP25.95■■□□□ 1.74
HMG20B-213ENST00000488973 UHRF1BP1LA0JNW5 1464 aa25.92■■□□□ 1.74
HMG20B-213ENST00000488973 INSRP06213 1382 aa25.92■■□□□ 1.74
HMG20B-213ENST00000488973 ZMYM4Q5VZL5 1548 aa25.92■■□□□ 1.74
HMG20B-213ENST00000488973 LAMC1P11047 1609 aa25.91■■□□□ 1.74
HMG20B-213ENST00000488973 MS4A1P11836 297 aa25.9■■□□□ 1.74
HMG20B-213ENST00000488973 PRAG1Q86YV5 1406 aa25.9■■□□□ 1.74
HMG20B-213ENST00000488973 FAM135AQ9P2D6 1515 aa25.89■■□□□ 1.74
HMG20B-213ENST00000488973 WASHC2CQ9Y4E1 1318 aa25.88■■□□□ 1.73
HMG20B-213ENST00000488973 PDE4AP27815 886 aa25.86■■□□□ 1.73
HMG20B-213ENST00000488973 PER1O15534 1290 aaPredicted RBP25.86■■□□□ 1.73
HMG20B-213ENST00000488973 GPRASP1Q5JY77 1395 aa25.85■■□□□ 1.73
HMG20B-213ENST00000488973 BACH2Q9BYV9 841 aa25.85■■□□□ 1.73
HMG20B-213ENST00000488973 COL17A1Q9UMD9 1497 aaPredicted RBP25.84■■□□□ 1.73
HMG20B-213ENST00000488973 BLMP54132 1417 aaPredicted RBP25.84■■□□□ 1.73
HMG20B-213ENST00000488973 CCDC144AA2RUR9 1427 aa25.82■■□□□ 1.72
HMG20B-213ENST00000488973 PRDM15P57071 1507 aaPredicted RBP25.82■■□□□ 1.72
HMG20B-213ENST00000488973 CCDC141Q6ZP82 1450 aa25.81■■□□□ 1.72
HMG20B-213ENST00000488973 PLEKHH2Q8IVE3 1493 aa25.8■■□□□ 1.72
HMG20B-213ENST00000488973 CDC42BPBQ9Y5S2 1711 aa25.8■■□□□ 1.72
HMG20B-213ENST00000488973 HNRNPMP52272 730 aaKnown RBP eCLIP25.8■■□□□ 1.72
HMG20B-213ENST00000488973 SAMD9LQ8IVG5 1584 aa25.79■■□□□ 1.72
HMG20B-213ENST00000488973 MYO5CQ9NQX4 1742 aa25.79■■□□□ 1.72
HMG20B-213ENST00000488973 UNC13BO14795 1591 aa25.79■■□□□ 1.72
HMG20B-213ENST00000488973 NPM2Q86SE8 214 aaKnown RBP25.78■■□□□ 1.72
HMG20B-213ENST00000488973 PREX2Q70Z35 1606 aa25.78■■□□□ 1.72
HMG20B-213ENST00000488973 EIF2AK4Q9P2K8 1649 aaKnown RBP25.77■■□□□ 1.72
HMG20B-213ENST00000488973 CDCA7LQ96GN5 454 aa25.77■■□□□ 1.72
HMG20B-213ENST00000488973 USP35Q9P2H5 1018 aa25.77■■□□□ 1.72
HMG20B-213ENST00000488973 RSPH4AQ5TD94 716 aa25.76■■□□□ 1.71
HMG20B-213ENST00000488973 A2MP01023 1474 aa25.75■■□□□ 1.71
HMG20B-213ENST00000488973 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.75■■□□□ 1.716e-8■□□□□ 8.9
HMG20B-213ENST00000488973 PKNOX2Q96KN3 472 aa25.75■■□□□ 1.71
HMG20B-213ENST00000488973 ZCCHC11Q5TAX3 1644 aaKnown RBP25.74■■□□□ 1.71
HMG20B-213ENST00000488973 NBPF1Q3BBV0 1214 aa25.74■■□□□ 1.71
HMG20B-213ENST00000488973 MAST1Q9Y2H9 1570 aa25.73■■□□□ 1.71
HMG20B-213ENST00000488973 TESK2Q96S53 571 aa25.73■■□□□ 1.71
HMG20B-213ENST00000488973 PLA2R1Q13018 1463 aa25.72■■□□□ 1.71
HMG20B-213ENST00000488973 DISP3Q9P2K9 1392 aa25.71■■□□□ 1.71
HMG20B-213ENST00000488973 TTC37Q6PGP7 1564 aa25.71■■□□□ 1.71
HMG20B-213ENST00000488973 ERBINQ96RT1 1412 aa25.7■■□□□ 1.71
HMG20B-213ENST00000488973 IQGAP3Q86VI3 1631 aa25.7■■□□□ 1.7
HMG20B-213ENST00000488973 OSCARQ8IYS5 282 aa25.7■■□□□ 1.7
HMG20B-213ENST00000488973 CC2D1BQ5T0F9 858 aaKnown RBP25.68■■□□□ 1.7
HMG20B-213ENST00000488973 DAXXQ9UER7 740 aaPredicted RBP25.68■■□□□ 1.7
HMG20B-213ENST00000488973 PPM1GO15355 546 aaPredicted RBP25.68■■□□□ 1.7
HMG20B-213ENST00000488973 PANK3Q9H999 370 aa25.67■■□□□ 1.7
HMG20B-213ENST00000488973 CRBNQ96SW2 442 aa25.67■■□□□ 1.7
HMG20B-213ENST00000488973 PLIN1O60240 522 aa25.66■■□□□ 1.7
HMG20B-213ENST00000488973 RGL3Q3MIN7 710 aa25.66■■□□□ 1.7
HMG20B-213ENST00000488973 RNF17Q9BXT8 1623 aaKnown RBP25.66■■□□□ 1.7
HMG20B-213ENST00000488973 DDRGK1Q96HY6 314 aa25.65■■□□□ 1.7
HMG20B-213ENST00000488973 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.65■■□□□ 1.7
HMG20B-213ENST00000488973 NEFMP07197 916 aa25.65■■□□□ 1.7
HMG20B-213ENST00000488973 TMF1P82094 1093 aa25.64■■□□□ 1.7
HMG20B-213ENST00000488973 ARHGAP5Q13017 1502 aa25.64■■□□□ 1.7
HMG20B-213ENST00000488973 PLXNC1O60486 1568 aa25.64■■□□□ 1.7
HMG20B-213ENST00000488973 ATP10AO60312 1499 aa25.64■■□□□ 1.69
HMG20B-213ENST00000488973 PLCH2O75038 1416 aa25.62■■□□□ 1.69
HMG20B-213ENST00000488973 LAS1LQ9Y4W2 734 aaKnown RBP25.62■■□□□ 1.69
HMG20B-213ENST00000488973 SYCP2Q9BX26 1530 aa25.62■■□□□ 1.69
HMG20B-213ENST00000488973 IL27Q8NEV9 243 aa25.62■■□□□ 1.69
HMG20B-213ENST00000488973 KDM2BQ8NHM5 1336 aa25.58■■□□□ 1.69
HMG20B-213ENST00000488973 MAGI2Q86UL8 1455 aa25.56■■□□□ 1.68
HMG20B-213ENST00000488973 ARAP3Q8WWN8 1544 aa25.55■■□□□ 1.68
HMG20B-213ENST00000488973 WDR7Q9Y4E6 1490 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms