RNA–Protein interactions for RNA: ENST00000488716.1

NME9-209, Transcript of NME/NM23 family member 9, humanhuman

TSL 3

Gene NME9, Length 688 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME9-209ENST00000488716 VPS8Q8N3P4 1428 aa12.54□□□□□ -0.4
NME9-209ENST00000488716 ZC3H15Q8WU90 426 aaKnown RBP12.54□□□□□ -0.4
NME9-209ENST00000488716 SAMD9Q5K651 1589 aa12.54□□□□□ -0.4
NME9-209ENST00000488716 UGGT2Q9NYU1 1516 aa12.53□□□□□ -0.4
NME9-209ENST00000488716 CEP170Q5SW79 1584 aa12.53□□□□□ -0.4
NME9-209ENST00000488716 IER5LQ5T953 404 aa12.53□□□□□ -0.4
NME9-209ENST00000488716 PDCD7Q8N8D1 485 aaKnown RBP12.53□□□□□ -0.4
NME9-209ENST00000488716 ASTLQ6HA08 431 aaPredicted RBP12.52□□□□□ -0.41
NME9-209ENST00000488716 CHMP7Q8WUX9 453 aaPredicted RBP12.52□□□□□ -0.41
NME9-209ENST00000488716 IRX5P78411 483 aaPredicted RBP12.51□□□□□ -0.41
NME9-209ENST00000488716 BOLA1Q9Y3E2 137 aa12.51□□□□□ -0.41
NME9-209ENST00000488716 PLCG2P16885 1265 aa12.5□□□□□ -0.41
NME9-209ENST00000488716 DSG2Q14126 1118 aa12.5□□□□□ -0.41
NME9-209ENST00000488716 CHD1O14646 1710 aa12.46□□□□□ -0.41
NME9-209ENST00000488716 DPYSL4O14531 572 aa12.46□□□□□ -0.41
NME9-209ENST00000488716 FOXK1P85037 733 aa12.46□□□□□ -0.41
NME9-209ENST00000488716 L3MBTL3Q96JM7 780 aaPredicted RBP12.45□□□□□ -0.42
NME9-209ENST00000488716 DISP1Q96F81 1524 aa12.45□□□□□ -0.42
NME9-209ENST00000488716 SPDYE16A6NNV3 312 aaPredicted RBP12.44□□□□□ -0.42
NME9-209ENST00000488716 PLPP6Q8IY26 295 aa12.44□□□□□ -0.42
NME9-209ENST00000488716 TMEM121BQ9BXQ6 578 aaPredicted RBP12.44□□□□□ -0.42
NME9-209ENST00000488716 FMN1Q68DA7 1419 aa12.44□□□□□ -0.42
NME9-209ENST00000488716 SEC24BO95487 1268 aa12.43□□□□□ -0.42
NME9-209ENST00000488716 MLLT3P42568 568 aaPredicted RBP12.43□□□□□ -0.42
NME9-209ENST00000488716 DCBLD2Q96PD2 775 aa12.43□□□□□ -0.42
NME9-209ENST00000488716 EMILIN3Q9NT22 766 aa12.43□□□□□ -0.42
NME9-209ENST00000488716 KIAA0556O60303 1618 aa12.43□□□□□ -0.42
NME9-209ENST00000488716 FHOD3Q2V2M9 1422 aa12.43□□□□□ -0.42
NME9-209ENST00000488716 CLASP1Q7Z460 1538 aa12.42□□□□□ -0.42
NME9-209ENST00000488716 SHROOM2Q13796 1616 aa12.42□□□□□ -0.42
NME9-209ENST00000488716 C2orf72A6NCS6 295 aa12.42□□□□□ -0.42
NME9-209ENST00000488716 GABBR2O75899 941 aa12.42□□□□□ -0.42
NME9-209ENST00000488716 SLC24A3Q9HC58 644 aa12.42□□□□□ -0.42
NME9-209ENST00000488716 MAP3K1Q13233 1512 aa12.42□□□□□ -0.42
NME9-209ENST00000488716 FYCO1Q9BQS8 1478 aa12.41□□□□□ -0.42
NME9-209ENST00000488716 TMEM132AQ24JP5 1023 aa12.41□□□□□ -0.42
NME9-209ENST00000488716 CASKIN1Q8WXD9 1431 aa12.4□□□□□ -0.42
NME9-209ENST00000488716 RANGAP1P46060 587 aaPredicted RBP12.4□□□□□ -0.42
NME9-209ENST00000488716 PDIA6Q15084 440 aa12.39□□□□□ -0.43
NME9-209ENST00000488716 RBM26Q5T8P6 1007 aaKnown RBP12.39□□□□□ -0.43
NME9-209ENST00000488716 CARMIL2Q6F5E8 1435 aa12.38□□□□□ -0.43
NME9-209ENST00000488716 ZMYND10O75800 440 aa12.38□□□□□ -0.43
NME9-209ENST00000488716 GPIHBP1Q8IV16 184 aa12.38□□□□□ -0.43
NME9-209ENST00000488716 JPH4Q96JJ6 628 aa12.38□□□□□ -0.43
NME9-209ENST00000488716 PCF11O94913 1555 aaKnown RBP12.38□□□□□ -0.43
NME9-209ENST00000488716 KIF3CO14782 793 aa12.37□□□□□ -0.43
NME9-209ENST00000488716 MAP3K9P80192 1104 aa12.37□□□□□ -0.43
NME9-209ENST00000488716 NEUROD2Q15784 382 aa12.35□□□□□ -0.43
NME9-209ENST00000488716 BRPF1P55201 1214 aaPredicted RBP12.34□□□□□ -0.43
NME9-209ENST00000488716 SLC39A7Q92504 469 aa12.34□□□□□ -0.43
NME9-209ENST00000488716 GTF3C3Q9Y5Q9 886 aa12.34□□□□□ -0.43
NME9-209ENST00000488716 BARGINQ6ZT62 677 aa12.33□□□□□ -0.44
NME9-209ENST00000488716 KRI1Q8N9T8 703 aaKnown RBP12.33□□□□□ -0.44
NME9-209ENST00000488716 PRG4Q92954 1404 aaPredicted RBP12.33□□□□□ -0.44
NME9-209ENST00000488716 TIAM1Q13009 1591 aa12.33□□□□□ -0.44
NME9-209ENST00000488716 CFAP43Q8NDM7 1665 aa12.32□□□□□ -0.44
NME9-209ENST00000488716 PELP1Q8IZL8 1130 aaKnown RBP12.32□□□□□ -0.44
NME9-209ENST00000488716 HECW1Q76N89 1606 aa12.31□□□□□ -0.44
NME9-209ENST00000488716 UPF1Q92900 1129 aaKnown RBP eCLIP12.31□□□□□ -0.44
NME9-209ENST00000488716 COLQQ9Y215 455 aaPredicted RBP12.31□□□□□ -0.44
NME9-209ENST00000488716 CCDC18Q5T9S5 1454 aa12.3□□□□□ -0.44
NME9-209ENST00000488716 GRXCR2A6NFK2 248 aa12.29□□□□□ -0.44
NME9-209ENST00000488716 C7P10643 843 aa12.29□□□□□ -0.44
NME9-209ENST00000488716 LRRC9Q6ZRR7 1453 aa12.27□□□□□ -0.44
NME9-209ENST00000488716 ABCA8O94911 1581 aa12.27□□□□□ -0.44
NME9-209ENST00000488716 RAPGEF6Q8TEU7 1601 aa12.27□□□□□ -0.44
NME9-209ENST00000488716 TMEM92Q6UXU6 159 aa12.27□□□□□ -0.45
NME9-209ENST00000488716 TBC1D12O60347 775 aa12.26□□□□□ -0.45
NME9-209ENST00000488716 C3orf67Q6ZVT6 689 aa12.26□□□□□ -0.45
NME9-209ENST00000488716 AK7Q96M32 723 aa12.26□□□□□ -0.45
NME9-209ENST00000488716 NUP153P49790 1475 aaKnown RBP12.26□□□□□ -0.45
NME9-209ENST00000488716 EPRSP07814 1512 aaKnown RBP12.26□□□□□ -0.45
NME9-209ENST00000488716 TRIM26Q12899 539 aaPredicted RBP12.25□□□□□ -0.45
NME9-209ENST00000488716 PTPRGP23470 1445 aa12.24□□□□□ -0.45
NME9-209ENST00000488716 ERCC6L2Q5T890 1561 aa12.24□□□□□ -0.45
NME9-209ENST00000488716 METRNQ9UJH8 293 aa12.24□□□□□ -0.45
NME9-209ENST00000488716 LRRIQ1Q96JM4 1722 aa12.23□□□□□ -0.45
NME9-209ENST00000488716 PLB1Q6P1J6 1458 aa12.23□□□□□ -0.45
NME9-209ENST00000488716 POTEHQ6S545 545 aa12.23□□□□□ -0.45
NME9-209ENST00000488716 OXER1Q8TDS5 423 aa12.23□□□□□ -0.45
NME9-209ENST00000488716 KANK4Q5T7N3 995 aaPredicted RBP12.22□□□□□ -0.45
NME9-209ENST00000488716 EHBP1L1Q8N3D4 1523 aa12.21□□□□□ -0.45
NME9-209ENST00000488716 NUTM2FA1L443 756 aa12.21□□□□□ -0.45
NME9-209ENST00000488716 ZNF316A6NFI3 1004 aaPredicted RBP12.21□□□□□ -0.45
NME9-209ENST00000488716 UHRF1BP1LA0JNW5 1464 aa12.21□□□□□ -0.46
NME9-209ENST00000488716 UACAQ9BZF9 1416 aa12.2□□□□□ -0.46
NME9-209ENST00000488716 POTEFA5A3E0 1075 aa12.2□□□□□ -0.46
NME9-209ENST00000488716 ARHGEF11O15085 1522 aa12.19□□□□□ -0.46
NME9-209ENST00000488716 ABCC2Q92887 1545 aa12.19□□□□□ -0.46
NME9-209ENST00000488716 CDK13Q14004 1512 aaKnown RBP12.18□□□□□ -0.46
NME9-209ENST00000488716 MAGI3Q5TCQ9 1506 aa12.18□□□□□ -0.46
NME9-209ENST00000488716 ERICH6Q7L0X2 663 aa12.18□□□□□ -0.46
NME9-209ENST00000488716 DDX12PQ92771 950 aa12.18□□□□□ -0.46
NME9-209ENST00000488716 EVI5O60447 810 aa12.17□□□□□ -0.46
NME9-209ENST00000488716 RRBP1Q9P2E9 1410 aaKnown RBP12.17□□□□□ -0.46
NME9-209ENST00000488716 MTUS2Q5JR59 1369 aa12.17□□□□□ -0.46
NME9-209ENST00000488716 PTGER2P43116 358 aa12.16□□□□□ -0.46
NME9-209ENST00000488716 PPARGC1BQ86YN6 1023 aaKnown RBP12.16□□□□□ -0.46
NME9-209ENST00000488716 OSBPP22059 807 aa12.15□□□□□ -0.46
NME9-209ENST00000488716 ATP10BO94823 1461 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms