RNA–Protein interactions for RNA: ENST00000488553.3

RN7SL561P-201, Transcript of RNA, 7SL, cytoplasmic 561, pseudogene, humanhuman

BASIC

Gene RN7SL561P, Length 281 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL561P-201ENST00000488553 INO80Q9ULG1 1556 aaPredicted RBP9.46□□□□□ -0.89
RN7SL561P-201ENST00000488553 DCAF11Q8TEB1 546 aa9.46□□□□□ -0.9
RN7SL561P-201ENST00000488553 CCDC144AA2RUR9 1427 aa9.46□□□□□ -0.9
RN7SL561P-201ENST00000488553 YTHDC1Q96MU7 727 aaKnown RBP9.45□□□□□ -0.9
RN7SL561P-201ENST00000488553 ZNF518AQ6AHZ1 1483 aa9.45□□□□□ -0.9
RN7SL561P-201ENST00000488553 CCER2I3L3R5 266 aa9.44□□□□□ -0.9
RN7SL561P-201ENST00000488553 KIF3BO15066 747 aa9.44□□□□□ -0.9
RN7SL561P-201ENST00000488553 MYT1LQ9UL68 1186 aa9.44□□□□□ -0.9
RN7SL561P-201ENST00000488553 KDM2AQ9Y2K7 1162 aa9.44□□□□□ -0.9
RN7SL561P-201ENST00000488553 CCDC7Q96M83 1385 aa9.44□□□□□ -0.9
RN7SL561P-201ENST00000488553 NEO1Q92859 1461 aa9.44□□□□□ -0.9
RN7SL561P-201ENST00000488553 MLH3Q9UHC1 1453 aa9.44□□□□□ -0.9
RN7SL561P-201ENST00000488553 VWDEQ8N2E2 1590 aa9.43□□□□□ -0.9
RN7SL561P-201ENST00000488553 PTPRTO14522 1441 aa9.43□□□□□ -0.9
RN7SL561P-201ENST00000488553 POGZQ7Z3K3 1410 aa9.43□□□□□ -0.9
RN7SL561P-201ENST00000488553 KANK1Q14678 1352 aa9.43□□□□□ -0.9
RN7SL561P-201ENST00000488553 ANP32CO43423 234 aa9.43□□□□□ -0.9
RN7SL561P-201ENST00000488553 ZNF326Q5BKZ1 582 aaKnown RBP9.43□□□□□ -0.9
RN7SL561P-201ENST00000488553 CFAP74Q9C0B2 1584 aa9.42□□□□□ -0.9
RN7SL561P-201ENST00000488553 RALGAPBQ86X10 1494 aa9.42□□□□□ -0.9
RN7SL561P-201ENST00000488553 SCAF1Q9H7N4 1312 aaKnown RBP9.42□□□□□ -0.9
RN7SL561P-201ENST00000488553 DEPDC5O75140 1603 aa9.42□□□□□ -0.9
RN7SL561P-201ENST00000488553 ARID4BQ4LE39 1312 aaPredicted RBP9.41□□□□□ -0.9
RN7SL561P-201ENST00000488553 RGL3Q3MIN7 710 aa9.41□□□□□ -0.9
RN7SL561P-201ENST00000488553 CARD11Q9BXL7 1154 aa9.41□□□□□ -0.9
RN7SL561P-201ENST00000488553 RIMBP3CA6NJZ7 1639 aa9.41□□□□□ -0.9
RN7SL561P-201ENST00000488553 RIMBP3BA6NNM3 1639 aa9.41□□□□□ -0.9
RN7SL561P-201ENST00000488553 RIMBP3Q9UFD9 1639 aa9.41□□□□□ -0.9
RN7SL561P-201ENST00000488553 GLI2P10070 1586 aa9.41□□□□□ -0.9
RN7SL561P-201ENST00000488553 KDM5CP41229 1560 aa9.41□□□□□ -0.9
RN7SL561P-201ENST00000488553 A2MP01023 1474 aa9.4□□□□□ -0.9
RN7SL561P-201ENST00000488553 KIDINS220Q9ULH0 1771 aa9.4□□□□□ -0.9
RN7SL561P-201ENST00000488553 USP47Q96K76 1375 aa9.4□□□□□ -0.9
RN7SL561P-201ENST00000488553 KIF7Q2M1P5 1343 aa9.4□□□□□ -0.9
RN7SL561P-201ENST00000488553 RAPGEF3O95398 923 aa9.4□□□□□ -0.9
RN7SL561P-201ENST00000488553 STAC3Q96MF2 364 aa9.4□□□□□ -0.9
RN7SL561P-201ENST00000488553 EIF2AK4Q9P2K8 1649 aaKnown RBP9.4□□□□□ -0.9
RN7SL561P-201ENST00000488553 PRAG1Q86YV5 1406 aa9.39□□□□□ -0.91
RN7SL561P-201ENST00000488553 FAM69CQ0P6D2 419 aa9.38□□□□□ -0.91
RN7SL561P-201ENST00000488553 CNTLNQ9NXG0 1405 aa9.38□□□□□ -0.91
RN7SL561P-201ENST00000488553 MROH1Q8NDA8 1641 aa9.38□□□□□ -0.91
RN7SL561P-201ENST00000488553 GPRASP1Q5JY77 1395 aa9.37□□□□□ -0.91
RN7SL561P-201ENST00000488553 TRPM2O94759 1503 aa9.37□□□□□ -0.91
RN7SL561P-201ENST00000488553 PRDM15P57071 1507 aaPredicted RBP9.37□□□□□ -0.91
RN7SL561P-201ENST00000488553 LMTK2Q8IWU2 1503 aa9.37□□□□□ -0.91
RN7SL561P-201ENST00000488553 E9PCH4 1651 aa9.37□□□□□ -0.91
RN7SL561P-201ENST00000488553 TET3O43151 1660 aa9.37□□□□□ -0.91
RN7SL561P-201ENST00000488553 NBPF1Q3BBV0 1214 aa9.37□□□□□ -0.91
RN7SL561P-201ENST00000488553 MAP3K4Q9Y6R4 1608 aa9.37□□□□□ -0.91
RN7SL561P-201ENST00000488553 ST20-MTHFSA0A0A6YYL1 179 aa9.36□□□□□ -0.91
RN7SL561P-201ENST00000488553 FRMPD1Q5SYB0 1578 aa9.36□□□□□ -0.91
RN7SL561P-201ENST00000488553 ROCK2O75116 1388 aaKnown RBP9.36□□□□□ -0.91
RN7SL561P-201ENST00000488553 RNF17Q9BXT8 1623 aaKnown RBP9.34□□□□□ -0.91
RN7SL561P-201ENST00000488553 HECW2Q9P2P5 1572 aa9.34□□□□□ -0.91
RN7SL561P-201ENST00000488553 GGT6Q6P531 493 aa9.34□□□□□ -0.91
RN7SL561P-201ENST00000488553 GTF3C3Q9Y5Q9 886 aa9.34□□□□□ -0.91
RN7SL561P-201ENST00000488553 NEURL4Q96JN8 1562 aa9.33□□□□□ -0.92
RN7SL561P-201ENST00000488553 PRKRIP1Q9H875 184 aaPredicted RBP9.33□□□□□ -0.92
RN7SL561P-201ENST00000488553 TRPM1Q7Z4N2 1603 aa9.33□□□□□ -0.92
RN7SL561P-201ENST00000488553 BCORL1Q5H9F3 1711 aa9.33□□□□□ -0.92
RN7SL561P-201ENST00000488553 WASHC2CQ9Y4E1 1318 aa9.32□□□□□ -0.92
RN7SL561P-201ENST00000488553 EFCAB6Q5THR3 1501 aa9.32□□□□□ -0.92
RN7SL561P-201ENST00000488553 CLTCL1P53675 1640 aa9.32□□□□□ -0.92
RN7SL561P-201ENST00000488553 ABCA6Q8N139 1617 aa9.31□□□□□ -0.92
RN7SL561P-201ENST00000488553 TESK2Q96S53 571 aa9.31□□□□□ -0.92
RN7SL561P-201ENST00000488553 DIP2BQ9P265 1576 aa9.31□□□□□ -0.92
RN7SL561P-201ENST00000488553 SPHKAPQ2M3C7 1700 aa9.31□□□□□ -0.92
RN7SL561P-201ENST00000488553 LAMC1P11047 1609 aa9.31□□□□□ -0.92
RN7SL561P-201ENST00000488553 DIP2CQ9Y2E4 1556 aa9.3□□□□□ -0.92
RN7SL561P-201ENST00000488553 RICTORQ6R327 1708 aa9.3□□□□□ -0.92
RN7SL561P-201ENST00000488553 NPATQ14207 1427 aa9.3□□□□□ -0.92
RN7SL561P-201ENST00000488553 YEATS2Q9ULM3 1422 aa9.3□□□□□ -0.92
RN7SL561P-201ENST00000488553 PPRC1Q5VV67 1664 aaKnown RBP9.29□□□□□ -0.92
RN7SL561P-201ENST00000488553 POLR1AO95602 1720 aaPredicted RBP9.29□□□□□ -0.92
RN7SL561P-201ENST00000488553 ABCC3O15438 1527 aa9.29□□□□□ -0.92
RN7SL561P-201ENST00000488553 ZMYM4Q5VZL5 1548 aa9.28□□□□□ -0.92
RN7SL561P-201ENST00000488553 POLR3GLQ9BT43 218 aa9.28□□□□□ -0.92
RN7SL561P-201ENST00000488553 NOS1P29475 1434 aa9.28□□□□□ -0.92
RN7SL561P-201ENST00000488553 ARHGAP31Q2M1Z3 1444 aa9.28□□□□□ -0.92
RN7SL561P-201ENST00000488553 RPGRIP1LQ68CZ1 1315 aa9.28□□□□□ -0.92
RN7SL561P-201ENST00000488553 CEP152O94986 1710 aa9.28□□□□□ -0.92
RN7SL561P-201ENST00000488553 CCDC184Q52MB2 194 aa9.27□□□□□ -0.93
RN7SL561P-201ENST00000488553 PPP6R1Q9UPN7 881 aa9.27□□□□□ -0.93
RN7SL561P-201ENST00000488553 UGGT1Q9NYU2 1555 aa9.27□□□□□ -0.93
RN7SL561P-201ENST00000488553 ADGRF5Q8IZF2 1346 aa9.27□□□□□ -0.93
RN7SL561P-201ENST00000488553 MYOM2P54296 1465 aa9.27□□□□□ -0.93
RN7SL561P-201ENST00000488553 MADDQ8WXG6 1647 aa9.27□□□□□ -0.93
RN7SL561P-201ENST00000488553 TMF1P82094 1093 aa9.26□□□□□ -0.93
RN7SL561P-201ENST00000488553 PER1O15534 1290 aaPredicted RBP9.25□□□□□ -0.93
RN7SL561P-201ENST00000488553 CFAP70Q5T0N1 1121 aa9.25□□□□□ -0.93
RN7SL561P-201ENST00000488553 SCAF11Q99590 1463 aaKnown RBP9.25□□□□□ -0.93
RN7SL561P-201ENST00000488553 NRXN1Q9ULB1 1477 aa9.25□□□□□ -0.93
RN7SL561P-201ENST00000488553 DISP3Q9P2K9 1392 aa9.24□□□□□ -0.93
RN7SL561P-201ENST00000488553 AEBP2Q6ZN18 517 aaPredicted RBP9.24□□□□□ -0.93
RN7SL561P-201ENST00000488553 SLC52A1Q9NWF4 448 aa9.24□□□□□ -0.93
RN7SL561P-201ENST00000488553 KTN1Q86UP2 1357 aaKnown RBP9.24□□□□□ -0.93
RN7SL561P-201ENST00000488553 COL17A1Q9UMD9 1497 aaPredicted RBP9.23□□□□□ -0.93
RN7SL561P-201ENST00000488553 ADGRB3O60242 1522 aa9.23□□□□□ -0.93
RN7SL561P-201ENST00000488553 AGLP35573 1532 aa9.23□□□□□ -0.93
RN7SL561P-201ENST00000488553 SLC24A1O60721 1099 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms