RNA–Protein interactions for RNA: ENST00000488535.2

ABCA2-219, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 3,327 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-219ENST00000488535 KDM6BO15054 1643 aa17.25■□□□□ 0.35
ABCA2-219ENST00000488535 CRBNQ96SW2 442 aa17.24■□□□□ 0.35
ABCA2-219ENST00000488535 SLKQ9H2G2 1235 aaPredicted RBP17.24■□□□□ 0.35
ABCA2-219ENST00000488535 VSIG10Q8N0Z9 540 aa17.23■□□□□ 0.35
ABCA2-219ENST00000488535 NAP1L5Q96NT1 182 aaPredicted RBP17.23■□□□□ 0.35
ABCA2-219ENST00000488535 ERCC6L2Q5T890 1561 aa17.23■□□□□ 0.35
ABCA2-219ENST00000488535 NUP155O75694 1391 aa17.23■□□□□ 0.35
ABCA2-219ENST00000488535 ANKRD30AQ9BXX3 1397 aa17.23■□□□□ 0.35
ABCA2-219ENST00000488535 WASHC2CQ9Y4E1 1318 aa17.22■□□□□ 0.35
ABCA2-219ENST00000488535 SPRYD3Q8NCJ5 442 aa17.21■□□□□ 0.35
ABCA2-219ENST00000488535 PKNOX2Q96KN3 472 aa17.21■□□□□ 0.35
ABCA2-219ENST00000488535 CHD1O14646 1710 aa17.21■□□□□ 0.35
ABCA2-219ENST00000488535 DCAF11Q8TEB1 546 aa17.2■□□□□ 0.34
ABCA2-219ENST00000488535 PNISRQ8TF01 805 aaKnown RBP17.2■□□□□ 0.34
ABCA2-219ENST00000488535 RGL3Q3MIN7 710 aa17.19■□□□□ 0.34
ABCA2-219ENST00000488535 GZF1Q9H116 711 aaPredicted RBP17.19■□□□□ 0.34
ABCA2-219ENST00000488535 NCOA1Q15788 1441 aa17.18■□□□□ 0.34
ABCA2-219ENST00000488535 CC2D1BQ5T0F9 858 aaKnown RBP17.18■□□□□ 0.34
ABCA2-219ENST00000488535 ANKRD50Q9ULJ7 1429 aa17.17■□□□□ 0.34
ABCA2-219ENST00000488535 C20orf194Q5TEA3 1177 aa17.16■□□□□ 0.34
ABCA2-219ENST00000488535 KIF15Q9NS87 1388 aa17.15■□□□□ 0.34
ABCA2-219ENST00000488535 C9orf84Q5VXU9 1444 aa17.14■□□□□ 0.34
ABCA2-219ENST00000488535 RSPH6AQ9H0K4 717 aa17.14■□□□□ 0.34
ABCA2-219ENST00000488535 ABCA8O94911 1581 aa17.14■□□□□ 0.33
ABCA2-219ENST00000488535 POGKQ9P215 609 aa17.14■□□□□ 0.33
ABCA2-219ENST00000488535 ROCK1Q13464 1354 aa17.14■□□□□ 0.33
ABCA2-219ENST00000488535 CARD11Q9BXL7 1154 aa17.13■□□□□ 0.33
ABCA2-219ENST00000488535 NPM1P06748 294 aaKnown RBP eCLIP17.13■□□□□ 0.33
ABCA2-219ENST00000488535 OSCARQ8IYS5 282 aa17.13■□□□□ 0.33
ABCA2-219ENST00000488535 AFAP1Q8N556 730 aa17.13■□□□□ 0.33
ABCA2-219ENST00000488535 EFCAB2Q5VUJ9 269 aa17.11■□□□□ 0.33
ABCA2-219ENST00000488535 ARHGAP5Q13017 1502 aa17.11■□□□□ 0.33
ABCA2-219ENST00000488535 MS4A1P11836 297 aa17.11■□□□□ 0.33
ABCA2-219ENST00000488535 GLIPR1L2Q4G1C9 344 aa17.1■□□□□ 0.33
ABCA2-219ENST00000488535 DENND4BO75064 1496 aaPredicted RBP17.09■□□□□ 0.33
ABCA2-219ENST00000488535 ANKRD30BQ9BXX2 1392 aa17.09■□□□□ 0.33
ABCA2-219ENST00000488535 RNF123Q5XPI4 1314 aa17.09■□□□□ 0.33
ABCA2-219ENST00000488535 DNMT1P26358 1616 aaKnown RBP17.09■□□□□ 0.33
ABCA2-219ENST00000488535 USP47Q96K76 1375 aa17.07■□□□□ 0.32
ABCA2-219ENST00000488535 ST20-MTHFSA0A0A6YYL1 179 aa17.07■□□□□ 0.32
ABCA2-219ENST00000488535 ABCC10Q5T3U5 1492 aa17.06■□□□□ 0.32
ABCA2-219ENST00000488535 SENP3Q9H4L4 574 aaPredicted RBP17.05■□□□□ 0.32
ABCA2-219ENST00000488535 RRAGDQ9NQL2 400 aaPredicted RBP17.05■□□□□ 0.32
ABCA2-219ENST00000488535 FAM43AQ8N2R8 423 aa17.04■□□□□ 0.32
ABCA2-219ENST00000488535 FAM161AQ3B820 660 aa17.03■□□□□ 0.32
ABCA2-219ENST00000488535 ZMYND15Q9H091 742 aa17.02■□□□□ 0.32
ABCA2-219ENST00000488535 ITSN2Q9NZM3 1697 aa17.02■□□□□ 0.32
ABCA2-219ENST00000488535 PNNQ9H307 717 aaKnown RBP17.01■□□□□ 0.31
ABCA2-219ENST00000488535 SPAG9O60271 1321 aaKnown RBP17.01■□□□□ 0.31
ABCA2-219ENST00000488535 RSPH4AQ5TD94 716 aa17.01■□□□□ 0.31
ABCA2-219ENST00000488535 GCC2Q8IWJ2 1684 aa17.01■□□□□ 0.31
ABCA2-219ENST00000488535 KDM5BQ9UGL1 1544 aa17■□□□□ 0.31
ABCA2-219ENST00000488535 HSP90AA2PQ14568 343 aaPredicted RBP17■□□□□ 0.31
ABCA2-219ENST00000488535 DHX29Q7Z478 1369 aaKnown RBP17■□□□□ 0.31
ABCA2-219ENST00000488535 MYBBP1AQ9BQG0 1328 aaKnown RBP17■□□□□ 0.31
ABCA2-219ENST00000488535 CYB5RLQ6IPT4 315 aa16.99■□□□□ 0.31
ABCA2-219ENST00000488535 ARID3AQ99856 593 aa16.99■□□□□ 0.31
ABCA2-219ENST00000488535 SYCP2Q9BX26 1530 aa16.99■□□□□ 0.31
ABCA2-219ENST00000488535 PZPP20742 1482 aa16.99■□□□□ 0.31
ABCA2-219ENST00000488535 KIAA1107Q9UPP5 1409 aa16.99■□□□□ 0.31
ABCA2-219ENST00000488535 ABCC2Q92887 1545 aa16.99■□□□□ 0.31
ABCA2-219ENST00000488535 CANXP27824 592 aaKnown RBP16.99■□□□□ 0.31
ABCA2-219ENST00000488535 CCDC141Q6ZP82 1450 aa16.98■□□□□ 0.31
ABCA2-219ENST00000488535 CDC42BPAQ5VT25 1732 aa16.97■□□□□ 0.31
ABCA2-219ENST00000488535 HSP90AA1P07900 732 aaKnown RBP16.97■□□□□ 0.31
ABCA2-219ENST00000488535 RPRD2Q5VT52 1461 aaKnown RBP16.96■□□□□ 0.31
ABCA2-219ENST00000488535 KIF3BO15066 747 aa16.96■□□□□ 0.31
ABCA2-219ENST00000488535 MBD5Q9P267 1494 aa16.96■□□□□ 0.31
ABCA2-219ENST00000488535 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.95■□□□□ 0.3
ABCA2-219ENST00000488535 PANK2Q9BZ23 570 aa16.95■□□□□ 0.3
ABCA2-219ENST00000488535 TTC37Q6PGP7 1564 aa16.95■□□□□ 0.3
ABCA2-219ENST00000488535 PLEKHH2Q8IVE3 1493 aa16.94■□□□□ 0.3
ABCA2-219ENST00000488535 C8orf34Q49A92 452 aa16.94■□□□□ 0.3
ABCA2-219ENST00000488535 NLRP13Q86W25 1043 aa16.94■□□□□ 0.3
ABCA2-219ENST00000488535 CCDC146Q8IYE0 955 aa16.93■□□□□ 0.3
ABCA2-219ENST00000488535 CHGAP10645 457 aaKnown RBP16.93■□□□□ 0.3
ABCA2-219ENST00000488535 TRAPPC8Q9Y2L5 1435 aa16.92■□□□□ 0.3
ABCA2-219ENST00000488535 CENPQQ7L2Z9 268 aaPredicted RBP16.92■□□□□ 0.3
ABCA2-219ENST00000488535 SAMD9LQ8IVG5 1584 aa16.92■□□□□ 0.3
ABCA2-219ENST00000488535 ADCY10Q96PN6 1610 aa16.91■□□□□ 0.3
ABCA2-219ENST00000488535 RALBP1Q15311 655 aa16.91■□□□□ 0.3
ABCA2-219ENST00000488535 ADGRL2O95490 1459 aa16.91■□□□□ 0.3
ABCA2-219ENST00000488535 WDR43Q15061 677 aaKnown RBP eCLIP16.91■□□□□ 0.3
ABCA2-219ENST00000488535 KTN1Q86UP2 1357 aaKnown RBP16.9■□□□□ 0.3
ABCA2-219ENST00000488535 SEC24BO95487 1268 aa16.9■□□□□ 0.3
ABCA2-219ENST00000488535 BECN1Q14457 450 aa16.9■□□□□ 0.3
ABCA2-219ENST00000488535 GGT6Q6P531 493 aa16.9■□□□□ 0.3
ABCA2-219ENST00000488535 PLCH2O75038 1416 aa16.89■□□□□ 0.3
ABCA2-219ENST00000488535 GOLGA6L3A6NEY3 463 aa16.89■□□□□ 0.29
ABCA2-219ENST00000488535 SCAPERQ9BY12 1400 aa16.89■□□□□ 0.29
ABCA2-219ENST00000488535 CCDC144AA2RUR9 1427 aa16.88■□□□□ 0.29
ABCA2-219ENST00000488535 NEUROD2Q15784 382 aa16.88■□□□□ 0.29
ABCA2-219ENST00000488535 NBPF1Q3BBV0 1214 aa16.88■□□□□ 0.29
ABCA2-219ENST00000488535 L1TD1Q5T7N2 865 aaKnown RBP16.88■□□□□ 0.29
ABCA2-219ENST00000488535 SHROOM2Q13796 1616 aa16.88■□□□□ 0.29
ABCA2-219ENST00000488535 CLASP1Q7Z460 1538 aa16.87■□□□□ 0.29
ABCA2-219ENST00000488535 ARHGEF12Q9NZN5 1544 aa16.87■□□□□ 0.29
ABCA2-219ENST00000488535 PDE3BQ13370 1112 aa16.87■□□□□ 0.29
ABCA2-219ENST00000488535 ADAMTS8Q9UP79 889 aa16.87■□□□□ 0.29
ABCA2-219ENST00000488535 CDC42BPBQ9Y5S2 1711 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms