RNA–Protein interactions for RNA: ENST00000488108.5

EXOSC8-207, Transcript of exosome component 8, humanhuman

TSL 4

Gene EXOSC8, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC8-207ENST00000488108 RABGEF1Q9UJ41 708 aa12.23□□□□□ -0.45
EXOSC8-207ENST00000488108 COL9A1P20849 921 aa12.22□□□□□ -0.45
EXOSC8-207ENST00000488108 PROX2Q3B8N5 592 aa12.22□□□□□ -0.45
EXOSC8-207ENST00000488108 EPAS1Q99814 870 aa12.22□□□□□ -0.45
EXOSC8-207ENST00000488108 SPRYD3Q8NCJ5 442 aa12.18□□□□□ -0.46
EXOSC8-207ENST00000488108 C6orf132Q5T0Z8 1188 aa12.17□□□□□ -0.46
EXOSC8-207ENST00000488108 ANKK1Q8NFD2 765 aa12.17□□□□□ -0.46
EXOSC8-207ENST00000488108 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.16□□□□□ -0.46
EXOSC8-207ENST00000488108 IFFO2Q5TF58 517 aa12.15□□□□□ -0.46
EXOSC8-207ENST00000488108 LAPTM4BQ86VI4 370 aa12.15□□□□□ -0.46
EXOSC8-207ENST00000488108 ONECUT3O60422 494 aaPredicted RBP12.14□□□□□ -0.47
EXOSC8-207ENST00000488108 DDX12PQ92771 950 aa12.14□□□□□ -0.47
EXOSC8-207ENST00000488108 KIAA1468Q9P260 1216 aa12.14□□□□□ -0.47
EXOSC8-207ENST00000488108 AMER1Q5JTC6 1135 aaPredicted RBP12.13□□□□□ -0.47
EXOSC8-207ENST00000488108 RBM33Q96EV2 1170 aaKnown RBP12.13□□□□□ -0.47
EXOSC8-207ENST00000488108 TRIM6-TRIM34B2RNG4 842 aa12.1□□□□□ -0.47
EXOSC8-207ENST00000488108 PDIA6Q15084 440 aa12.09□□□□□ -0.47
EXOSC8-207ENST00000488108 SOWAHBA6NEL2 793 aa12.08□□□□□ -0.48
EXOSC8-207ENST00000488108 SPDYE16A6NNV3 312 aaPredicted RBP12.08□□□□□ -0.48
EXOSC8-207ENST00000488108 BCAMP50895 628 aa12.08□□□□□ -0.48
EXOSC8-207ENST00000488108 NBR1Q14596 966 aa12.08□□□□□ -0.48
EXOSC8-207ENST00000488108 ZFRQ96KR1 1074 aaKnown RBP12.08□□□□□ -0.48
EXOSC8-207ENST00000488108 RGS20O76081 388 aa12.07□□□□□ -0.48
EXOSC8-207ENST00000488108 SEPT9Q9UHD8 586 aaPredicted RBP12.07□□□□□ -0.48
EXOSC8-207ENST00000488108 A0A0G2JS52 829 aa12.06□□□□□ -0.48
EXOSC8-207ENST00000488108 MAP3K7O43318 606 aa12.06□□□□□ -0.48
EXOSC8-207ENST00000488108 EN1Q05925 392 aaPredicted RBP12.06□□□□□ -0.48
EXOSC8-207ENST00000488108 E2F4Q16254 413 aa12.05□□□□□ -0.48
EXOSC8-207ENST00000488108 CFAP44Q96MT7 982 aa12.05□□□□□ -0.48
EXOSC8-207ENST00000488108 FAM98CQ17RN3 349 aaKnown RBP12.04□□□□□ -0.48
EXOSC8-207ENST00000488108 PAXIP1Q6ZW49 1069 aaPredicted RBP12.04□□□□□ -0.48
EXOSC8-207ENST00000488108 WDR70Q9NW82 654 aa12.04□□□□□ -0.48
EXOSC8-207ENST00000488108 NYAP1Q6ZVC0 841 aa12.03□□□□□ -0.48
EXOSC8-207ENST00000488108 TSR1Q2NL82 804 aaKnown RBP12.02□□□□□ -0.49
EXOSC8-207ENST00000488108 PACS2Q86VP3 889 aa12.01□□□□□ -0.49
EXOSC8-207ENST00000488108 RTN4Q9NQC3 1192 aaKnown RBP12.01□□□□□ -0.49
EXOSC8-207ENST00000488108 ITGBL1O95965 494 aaPredicted RBP12□□□□□ -0.49
EXOSC8-207ENST00000488108 WBP1LQ9NX94 342 aa12□□□□□ -0.49
EXOSC8-207ENST00000488108 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.99□□□□□ -0.49
EXOSC8-207ENST00000488108 ARIH1Q9Y4X5 557 aaPredicted RBP11.99□□□□□ -0.49
EXOSC8-207ENST00000488108 LRCH3Q96II8 777 aa11.98□□□□□ -0.49
EXOSC8-207ENST00000488108 TSKSQ9UJT2 592 aa11.98□□□□□ -0.49
EXOSC8-207ENST00000488108 GRXCR2A6NFK2 248 aa11.96□□□□□ -0.49
EXOSC8-207ENST00000488108 TSR3Q9UJK0 312 aaKnown RBP11.96□□□□□ -0.49
EXOSC8-207ENST00000488108 CERKQ8TCT0 537 aa11.95□□□□□ -0.5
EXOSC8-207ENST00000488108 HPS5Q9UPZ3 1129 aa11.95□□□□□ -0.5
EXOSC8-207ENST00000488108 CDCA7LQ96GN5 454 aa11.94□□□□□ -0.5
EXOSC8-207ENST00000488108 PRSS12P56730 875 aa11.93□□□□□ -0.5
EXOSC8-207ENST00000488108 KCNC4Q03721 635 aa11.92□□□□□ -0.5
EXOSC8-207ENST00000488108 PRIM1P49642 420 aaKnown RBP11.91□□□□□ -0.5
EXOSC8-207ENST00000488108 IRX2Q9BZI1 471 aaPredicted RBP11.91□□□□□ -0.5
EXOSC8-207ENST00000488108 NBPF26B4DH59 902 aa11.88□□□□□ -0.51
EXOSC8-207ENST00000488108 SMAPO00193 183 aa11.88□□□□□ -0.51
EXOSC8-207ENST00000488108 PPP4CP60510 307 aa11.88□□□□□ -0.51
EXOSC8-207ENST00000488108 FAM198AQ9UFP1 575 aa11.88□□□□□ -0.51
EXOSC8-207ENST00000488108 OSBPP22059 807 aa11.87□□□□□ -0.51
EXOSC8-207ENST00000488108 SAMD7Q7Z3H4 446 aa11.86□□□□□ -0.51
EXOSC8-207ENST00000488108 TATDN2Q93075 761 aa11.86□□□□□ -0.51
EXOSC8-207ENST00000488108 PNMA3Q9UL41 463 aa11.86□□□□□ -0.51
EXOSC8-207ENST00000488108 CDHR5Q9HBB8 845 aa11.85□□□□□ -0.51
EXOSC8-207ENST00000488108 RBM27Q9P2N5 1060 aaKnown RBP11.83□□□□□ -0.52
EXOSC8-207ENST00000488108 C3orf80F5H4A9 247 aa11.82□□□□□ -0.52
EXOSC8-207ENST00000488108 HDGFP51858 240 aaKnown RBP11.8□□□□□ -0.52
EXOSC8-207ENST00000488108 NUDT18Q6ZVK8 323 aa11.8□□□□□ -0.52
EXOSC8-207ENST00000488108 RNF40O75150 1001 aa11.76□□□□□ -0.53
EXOSC8-207ENST00000488108 TJAP1Q5JTD0 557 aa11.76□□□□□ -0.53
EXOSC8-207ENST00000488108 PADI6Q6TGC4 694 aa11.75□□□□□ -0.53
EXOSC8-207ENST00000488108 TTC13Q8NBP0 860 aa11.75□□□□□ -0.53
EXOSC8-207ENST00000488108 ARHGEF1Q92888 912 aaKnown RBP11.74□□□□□ -0.53
EXOSC8-207ENST00000488108 NPDC1Q9NQX5 325 aaPredicted RBP11.74□□□□□ -0.53
EXOSC8-207ENST00000488108 MTRQ99707 1265 aa11.73□□□□□ -0.53
EXOSC8-207ENST00000488108 IL21Q9HBE4 155 aa11.73□□□□□ -0.53
EXOSC8-207ENST00000488108 TSHZ2Q9NRE2 1034 aa11.73□□□□□ -0.53
EXOSC8-207ENST00000488108 NECTIN2Q92692 538 aa11.71□□□□□ -0.53
EXOSC8-207ENST00000488108 APLP1P51693 650 aa11.69□□□□□ -0.54
EXOSC8-207ENST00000488108 SWT1Q5T5J6 900 aaKnown RBP11.69□□□□□ -0.54
EXOSC8-207ENST00000488108 SLF2Q8IX21 1173 aa11.69□□□□□ -0.54
EXOSC8-207ENST00000488108 MLLT3P42568 568 aaPredicted RBP11.68□□□□□ -0.54
EXOSC8-207ENST00000488108 SLC4A3P48751 1232 aa11.67□□□□□ -0.54
EXOSC8-207ENST00000488108 KCNV2Q8TDN2 545 aa11.67□□□□□ -0.54
EXOSC8-207ENST00000488108 Q6ZNB5 142 aa11.66□□□□□ -0.54
EXOSC8-207ENST00000488108 ZNF516Q92618 1163 aa11.65□□□□□ -0.54
EXOSC8-207ENST00000488108 PPP1R18Q6NYC8 613 aa11.64□□□□□ -0.55
EXOSC8-207ENST00000488108 EYA1Q99502 592 aa11.64□□□□□ -0.55
EXOSC8-207ENST00000488108 LAPTM4AQ15012 233 aa11.63□□□□□ -0.55
EXOSC8-207ENST00000488108 PRKD2Q9BZL6 878 aa11.62□□□□□ -0.55
EXOSC8-207ENST00000488108 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.61□□□□□ -0.55
EXOSC8-207ENST00000488108 COPS2P61201 443 aa11.6□□□□□ -0.55
EXOSC8-207ENST00000488108 PTGDRQ13258 359 aa11.6□□□□□ -0.55
EXOSC8-207ENST00000488108 PRR14Q9BWN1 585 aa11.59□□□□□ -0.55
EXOSC8-207ENST00000488108 DNAJB2P25686 324 aa11.58□□□□□ -0.56
EXOSC8-207ENST00000488108 P3H3Q8IVL6 736 aa11.58□□□□□ -0.56
EXOSC8-207ENST00000488108 NKX2-3Q8TAU0 364 aa11.58□□□□□ -0.56
EXOSC8-207ENST00000488108 V9GY48 417 aaPredicted RBP11.58□□□□□ -0.56
EXOSC8-207ENST00000488108 NUTM2FA1L443 756 aa11.57□□□□□ -0.56
EXOSC8-207ENST00000488108 GFRA3O60609 400 aa11.57□□□□□ -0.56
EXOSC8-207ENST00000488108 RBM46Q8TBY0 533 aaKnown RBP11.57□□□□□ -0.56
EXOSC8-207ENST00000488108 GGCXP38435 758 aa11.56□□□□□ -0.56
EXOSC8-207ENST00000488108 PCDHB3Q9Y5E6 796 aa11.55□□□□□ -0.56
EXOSC8-207ENST00000488108 ZPR1O75312 459 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms