RNA–Protein interactions for RNA: ENST00000487491.1

SPIRE1-209, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 4

Gene SPIRE1, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-209ENST00000487491 NBR1Q14596 966 aa11.31□□□□□ -0.6
SPIRE1-209ENST00000487491 MYT1LQ9UL68 1186 aa11.31□□□□□ -0.6
SPIRE1-209ENST00000487491 GRXCR2A6NFK2 248 aa11.3□□□□□ -0.6
SPIRE1-209ENST00000487491 RBM33Q96EV2 1170 aaKnown RBP11.3□□□□□ -0.6
SPIRE1-209ENST00000487491 SLC4A5Q9BY07 1137 aa11.3□□□□□ -0.6
SPIRE1-209ENST00000487491 C6orf132Q5T0Z8 1188 aa11.29□□□□□ -0.6
SPIRE1-209ENST00000487491 VPS9D1Q9Y2B5 631 aa11.29□□□□□ -0.6
SPIRE1-209ENST00000487491 KDM2AQ9Y2K7 1162 aa11.29□□□□□ -0.6
SPIRE1-209ENST00000487491 PPP1R3GB7ZBB8 358 aa11.28□□□□□ -0.6
SPIRE1-209ENST00000487491 VSIG10Q8N0Z9 540 aa11.28□□□□□ -0.6
SPIRE1-209ENST00000487491 EN1Q05925 392 aaPredicted RBP11.27□□□□□ -0.61
SPIRE1-209ENST00000487491 ZBED2Q9BTP6 218 aa11.27□□□□□ -0.61
SPIRE1-209ENST00000487491 MAP3K7O43318 606 aa11.26□□□□□ -0.61
SPIRE1-209ENST00000487491 HRO43593 1189 aa11.26□□□□□ -0.61
SPIRE1-209ENST00000487491 RNF166Q96A37 237 aaPredicted RBP11.26□□□□□ -0.61
SPIRE1-209ENST00000487491 STAC3Q96MF2 364 aa11.26□□□□□ -0.61
SPIRE1-209ENST00000487491 COL9A1P20849 921 aa11.25□□□□□ -0.61
SPIRE1-209ENST00000487491 OSBPP22059 807 aa11.23□□□□□ -0.61
SPIRE1-209ENST00000487491 TSR1Q2NL82 804 aaKnown RBP11.21□□□□□ -0.61
SPIRE1-209ENST00000487491 MLLT3P42568 568 aaPredicted RBP11.2□□□□□ -0.62
SPIRE1-209ENST00000487491 PRIM1P49642 420 aaKnown RBP11.2□□□□□ -0.62
SPIRE1-209ENST00000487491 PROX2Q3B8N5 592 aa11.19□□□□□ -0.62
SPIRE1-209ENST00000487491 BHMG1C9JSJ3 638 aaPredicted RBP11.18□□□□□ -0.62
SPIRE1-209ENST00000487491 RABGEF1Q9UJ41 708 aa11.18□□□□□ -0.62
SPIRE1-209ENST00000487491 SEMA3EO15041 775 aa11.17□□□□□ -0.62
SPIRE1-209ENST00000487491 CERKQ8TCT0 537 aa11.17□□□□□ -0.62
SPIRE1-209ENST00000487491 NBPF3Q9H094 633 aa11.17□□□□□ -0.62
SPIRE1-209ENST00000487491 ONECUT3O60422 494 aaPredicted RBP11.16□□□□□ -0.62
SPIRE1-209ENST00000487491 MRPL50Q8N5N7 158 aaKnown RBP11.16□□□□□ -0.62
SPIRE1-209ENST00000487491 TRIM6-TRIM34B2RNG4 842 aa11.14□□□□□ -0.63
SPIRE1-209ENST00000487491 KIAA1468Q9P260 1216 aa11.14□□□□□ -0.63
SPIRE1-209ENST00000487491 GOLGA8CPA6NN73 597 aa11.12□□□□□ -0.63
SPIRE1-209ENST00000487491 CDHR5Q9HBB8 845 aa11.12□□□□□ -0.63
SPIRE1-209ENST00000487491 PRSS12P56730 875 aa11.11□□□□□ -0.63
SPIRE1-209ENST00000487491 PACS2Q86VP3 889 aa11.11□□□□□ -0.63
SPIRE1-209ENST00000487491 KCTD12Q96CX2 325 aaKnown RBP11.11□□□□□ -0.63
SPIRE1-209ENST00000487491 TESPA1A2RU30 521 aaPredicted RBP11.1□□□□□ -0.63
SPIRE1-209ENST00000487491 CDCA7LQ96GN5 454 aa11.1□□□□□ -0.63
SPIRE1-209ENST00000487491 SMYD5Q6GMV2 418 aa11.09□□□□□ -0.63
SPIRE1-209ENST00000487491 LAPTM4BQ86VI4 370 aa11.09□□□□□ -0.63
SPIRE1-209ENST00000487491 HCSTQ9UBK5 93 aa11.08□□□□□ -0.64
SPIRE1-209ENST00000487491 TSKSQ9UJT2 592 aa11.08□□□□□ -0.64
SPIRE1-209ENST00000487491 NPDC1Q9NQX5 325 aaPredicted RBP11.07□□□□□ -0.64
SPIRE1-209ENST00000487491 NUTM2FA1L443 756 aa11.06□□□□□ -0.64
SPIRE1-209ENST00000487491 WNT2BQ93097 391 aa11.06□□□□□ -0.64
SPIRE1-209ENST00000487491 RBM27Q9P2N5 1060 aaKnown RBP11.06□□□□□ -0.64
SPIRE1-209ENST00000487491 SEPT9Q9UHD8 586 aaPredicted RBP11.05□□□□□ -0.64
SPIRE1-209ENST00000487491 FAM98CQ17RN3 349 aaKnown RBP11.04□□□□□ -0.64
SPIRE1-209ENST00000487491 FAM198AQ9UFP1 575 aa11.04□□□□□ -0.64
SPIRE1-209ENST00000487491 ANKK1Q8NFD2 765 aa11.03□□□□□ -0.64
SPIRE1-209ENST00000487491 PTGDRQ13258 359 aa11.02□□□□□ -0.65
SPIRE1-209ENST00000487491 THSD4Q6ZMP0 1018 aa11.02□□□□□ -0.65
SPIRE1-209ENST00000487491 ZFRQ96KR1 1074 aaKnown RBP11.02□□□□□ -0.65
SPIRE1-209ENST00000487491 NBPF26B4DH59 902 aa11.01□□□□□ -0.65
SPIRE1-209ENST00000487491 PADI6Q6TGC4 694 aa11.01□□□□□ -0.65
SPIRE1-209ENST00000487491 TTC13Q8NBP0 860 aa11.01□□□□□ -0.65
SPIRE1-209ENST00000487491 TATDN2Q93075 761 aa11.01□□□□□ -0.65
SPIRE1-209ENST00000487491 RBM26Q5T8P6 1007 aaKnown RBP11□□□□□ -0.65
SPIRE1-209ENST00000487491 PTPN5P54829 565 aa10.99□□□□□ -0.65
SPIRE1-209ENST00000487491 PNMA3Q9UL41 463 aa10.99□□□□□ -0.65
SPIRE1-209ENST00000487491 SMAPO00193 183 aa10.98□□□□□ -0.65
SPIRE1-209ENST00000487491 FCHSD2O94868 740 aa10.98□□□□□ -0.65
SPIRE1-209ENST00000487491 NUDT18Q6ZVK8 323 aa10.97□□□□□ -0.65
SPIRE1-209ENST00000487491 SOWAHBA6NEL2 793 aa10.96□□□□□ -0.65
SPIRE1-209ENST00000487491 C3orf80F5H4A9 247 aa10.96□□□□□ -0.65
SPIRE1-209ENST00000487491 TULP1O00294 542 aaPredicted RBP10.96□□□□□ -0.65
SPIRE1-209ENST00000487491 BCAMP50895 628 aa10.94□□□□□ -0.66
SPIRE1-209ENST00000487491 LRCH3Q96II8 777 aa10.94□□□□□ -0.66
SPIRE1-209ENST00000487491 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.94□□□□□ -0.66
SPIRE1-209ENST00000487491 HIC1Q14526 733 aa10.92□□□□□ -0.66
SPIRE1-209ENST00000487491 HDGFP51858 240 aaKnown RBP10.91□□□□□ -0.66
SPIRE1-209ENST00000487491 SAMD7Q7Z3H4 446 aa10.9□□□□□ -0.66
SPIRE1-209ENST00000487491 EYA1Q99502 592 aa10.9□□□□□ -0.66
SPIRE1-209ENST00000487491 RBM46Q8TBY0 533 aaKnown RBP10.89□□□□□ -0.67
SPIRE1-209ENST00000487491 ADGRG1Q9Y653 693 aa10.89□□□□□ -0.67
SPIRE1-209ENST00000487491 GNPATO15228 680 aa10.88□□□□□ -0.67
SPIRE1-209ENST00000487491 GPIHBP1Q8IV16 184 aa10.88□□□□□ -0.67
SPIRE1-209ENST00000487491 TSR3Q9UJK0 312 aaKnown RBP10.88□□□□□ -0.67
SPIRE1-209ENST00000487491 HPS5Q9UPZ3 1129 aa10.88□□□□□ -0.67
SPIRE1-209ENST00000487491 NYAP1Q6ZVC0 841 aa10.87□□□□□ -0.67
SPIRE1-209ENST00000487491 WBP1LQ9NX94 342 aa10.87□□□□□ -0.67
SPIRE1-209ENST00000487491 PLA2G2EQ9NZK7 142 aa10.87□□□□□ -0.67
SPIRE1-209ENST00000487491 GPR37O15354 613 aa10.86□□□□□ -0.67
SPIRE1-209ENST00000487491 PPP4CP60510 307 aa10.85□□□□□ -0.67
SPIRE1-209ENST00000487491 OATP04181 439 aa10.84□□□□□ -0.67
SPIRE1-209ENST00000487491 FAM161AQ3B820 660 aa10.84□□□□□ -0.67
SPIRE1-209ENST00000487491 SWT1Q5T5J6 900 aaKnown RBP10.83□□□□□ -0.68
SPIRE1-209ENST00000487491 FECHP22830 423 aa10.82□□□□□ -0.68
SPIRE1-209ENST00000487491 DNAJB2P25686 324 aa10.82□□□□□ -0.68
SPIRE1-209ENST00000487491 SLC4A3P48751 1232 aa10.82□□□□□ -0.68
SPIRE1-209ENST00000487491 RNF40O75150 1001 aa10.81□□□□□ -0.68
SPIRE1-209ENST00000487491 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.81□□□□□ -0.68
SPIRE1-209ENST00000487491 SLF2Q8IX21 1173 aa10.81□□□□□ -0.68
SPIRE1-209ENST00000487491 RCCD1A6NED2 376 aa10.8□□□□□ -0.68
SPIRE1-209ENST00000487491 SLC24A1O60721 1099 aa10.79□□□□□ -0.68
SPIRE1-209ENST00000487491 PXYLP1Q8TE99 480 aa10.79□□□□□ -0.68
SPIRE1-209ENST00000487491 NECTIN2Q92692 538 aa10.79□□□□□ -0.68
SPIRE1-209ENST00000487491 TMEM134Q9H6X4 195 aa10.79□□□□□ -0.68
SPIRE1-209ENST00000487491 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.78□□□□□ -0.68
SPIRE1-209ENST00000487491 METTL3Q86U44 580 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms