RNA–Protein interactions for RNA: ENST00000487491.1

SPIRE1-209, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 4

Gene SPIRE1, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-209ENST00000487491 AEBP2Q6ZN18 517 aaPredicted RBP26.44■■□□□ 1.82
SPIRE1-209ENST00000487491 CHIC1Q5VXU3 224 aa25.59■■□□□ 1.69
SPIRE1-209ENST00000487491 SENP3Q9H4L4 574 aaPredicted RBP22.54■■□□□ 1.2
SPIRE1-209ENST00000487491 PHF23Q9BUL5 403 aaPredicted RBP22.45■■□□□ 1.18
SPIRE1-209ENST00000487491 FOXD1Q16676 465 aa20.92■□□□□ 0.94
SPIRE1-209ENST00000487491 PLPPR3Q6T4P5 718 aa20.67■□□□□ 0.9
SPIRE1-209ENST00000487491 PPP6R1Q9UPN7 881 aa19.91■□□□□ 0.78
SPIRE1-209ENST00000487491 ADRA2BP18089 450 aa19.88■□□□□ 0.77
SPIRE1-209ENST00000487491 PIAS4Q8N2W9 510 aaPredicted RBP19.68■□□□□ 0.74
SPIRE1-209ENST00000487491 MSH5O43196 834 aa19.43■□□□□ 0.7
SPIRE1-209ENST00000487491 SCAF1Q9H7N4 1312 aaKnown RBP18.25■□□□□ 0.51
SPIRE1-209ENST00000487491 PPP4R3CPQ6ZMV5 832 aa18.17■□□□□ 0.5
SPIRE1-209ENST00000487491 POTEDQ86YR6 584 aa18.14■□□□□ 0.49
SPIRE1-209ENST00000487491 MAPK8IP2Q13387 824 aaPredicted RBP18.11■□□□□ 0.49
SPIRE1-209ENST00000487491 DMRT2Q9Y5R5 561 aa17.93■□□□□ 0.46
SPIRE1-209ENST00000487491 CNKSR2Q8WXI2 1034 aa17.73■□□□□ 0.43
SPIRE1-209ENST00000487491 NCBP3Q53F19 620 aaKnown RBP17.66■□□□□ 0.42
SPIRE1-209ENST00000487491 HOXD11P31277 338 aaPredicted RBP17.45■□□□□ 0.38
SPIRE1-209ENST00000487491 RNF216Q9NWF9 866 aaPredicted RBP17.45■□□□□ 0.38
SPIRE1-209ENST00000487491 KCNA4P22459 653 aa17.43■□□□□ 0.38
SPIRE1-209ENST00000487491 NPM3O75607 178 aaKnown RBP17.34■□□□□ 0.37
SPIRE1-209ENST00000487491 DCAF8L1A6NGE4 600 aa17.18■□□□□ 0.34
SPIRE1-209ENST00000487491 DNAJC5BQ9UF47 199 aa16.9■□□□□ 0.3
SPIRE1-209ENST00000487491 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.66■□□□□ 0.26
SPIRE1-209ENST00000487491 RNF39Q9H2S5 420 aa16.61■□□□□ 0.25
SPIRE1-209ENST00000487491 SLC4A1APQ9BWU0 796 aaKnown RBP16.57■□□□□ 0.24
SPIRE1-209ENST00000487491 SLC4A2P04920 1241 aa16.44■□□□□ 0.22
SPIRE1-209ENST00000487491 C1QBPQ07021 282 aaKnown RBP16.42■□□□□ 0.22
SPIRE1-209ENST00000487491 CACNB1Q02641 598 aaPredicted RBP16.39■□□□□ 0.21
SPIRE1-209ENST00000487491 U3KPZ7 1027 aaPredicted RBP16.31■□□□□ 0.2
SPIRE1-209ENST00000487491 FOXD4L1Q9NU39 408 aa16.13■□□□□ 0.17
SPIRE1-209ENST00000487491 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.07■□□□□ 0.16
SPIRE1-209ENST00000487491 HNRNPUL2Q1KMD3 747 aaKnown RBP16.07■□□□□ 0.16
SPIRE1-209ENST00000487491 MYCNP04198 464 aaPredicted RBP16.05■□□□□ 0.16
SPIRE1-209ENST00000487491 ZBTB22O15209 634 aa16.01■□□□□ 0.15
SPIRE1-209ENST00000487491 SAMD1Q6SPF0 538 aaPredicted RBP15.99■□□□□ 0.15
SPIRE1-209ENST00000487491 APLP2Q06481 763 aa15.98■□□□□ 0.15
SPIRE1-209ENST00000487491 SPINK5Q9NQ38 1064 aaPredicted RBP15.94■□□□□ 0.14
SPIRE1-209ENST00000487491 CAPN15O75808 1086 aa15.92■□□□□ 0.14
SPIRE1-209ENST00000487491 TRHP20396 242 aaPredicted RBP15.77■□□□□ 0.12
SPIRE1-209ENST00000487491 ZNF219Q9P2Y4 722 aaPredicted RBP15.77■□□□□ 0.12
SPIRE1-209ENST00000487491 EHMT2Q96KQ7 1210 aa15.76■□□□□ 0.11
SPIRE1-209ENST00000487491 DSG3P32926 999 aa15.7■□□□□ 0.1
SPIRE1-209ENST00000487491 CSRNP3Q8WYN3 585 aa15.7■□□□□ 0.1
SPIRE1-209ENST00000487491 ATXN8OSP0DMR3 200 aa15.62■□□□□ 0.09
SPIRE1-209ENST00000487491 ATF5Q9Y2D1 282 aaPredicted RBP15.61■□□□□ 0.09
SPIRE1-209ENST00000487491 ABCB7O75027 752 aa15.57■□□□□ 0.08
SPIRE1-209ENST00000487491 POLA2Q14181 598 aa15.46■□□□□ 0.07
SPIRE1-209ENST00000487491 ZBTB12Q9Y330 459 aaPredicted RBP15.21■□□□□ 0.03
SPIRE1-209ENST00000487491 FBLN2P98095 1184 aa15.04■□□□□ -0
SPIRE1-209ENST00000487491 RBM42Q9BTD8 480 aaKnown RBP15.01□□□□□ -0.01
SPIRE1-209ENST00000487491 MKRN4PQ13434 485 aaPredicted RBP14.92□□□□□ -0.02
SPIRE1-209ENST00000487491 OSCARQ8IYS5 282 aa14.92□□□□□ -0.02
SPIRE1-209ENST00000487491 SPDYE2BA6NHP3 402 aa14.76□□□□□ -0.05
SPIRE1-209ENST00000487491 SPDYE6P0CI01 402 aa14.76□□□□□ -0.05
SPIRE1-209ENST00000487491 SPDYE2Q495Y8 402 aa14.76□□□□□ -0.05
SPIRE1-209ENST00000487491 AKT1S1Q96B36 256 aa14.75□□□□□ -0.05
SPIRE1-209ENST00000487491 ZNF692Q9BU19 519 aaPredicted RBP14.66□□□□□ -0.06
SPIRE1-209ENST00000487491 REM2Q8IYK8 340 aaPredicted RBP14.6□□□□□ -0.07
SPIRE1-209ENST00000487491 SSUH2Q9Y2M2 353 aa14.6□□□□□ -0.07
SPIRE1-209ENST00000487491 SPDYE4A6NLX3 237 aa14.49□□□□□ -0.09
SPIRE1-209ENST00000487491 CHRDL2Q6WN34 429 aa14.48□□□□□ -0.09
SPIRE1-209ENST00000487491 PABPN1Q86U42 306 aaKnown RBP eCLIP14.45□□□□□ -0.1
SPIRE1-209ENST00000487491 PITPNM1O00562 1244 aa14.42□□□□□ -0.1
SPIRE1-209ENST00000487491 SPDYE1Q8NFV5 336 aaPredicted RBP14.4□□□□□ -0.1
SPIRE1-209ENST00000487491 CLEC11AQ9Y240 323 aa14.33□□□□□ -0.12
SPIRE1-209ENST00000487491 POTEHQ6S545 545 aa14.32□□□□□ -0.12
SPIRE1-209ENST00000487491 FKBP8Q14318 412 aa14.23□□□□□ -0.13
SPIRE1-209ENST00000487491 FXR2P51116 673 aaKnown RBP eCLIP14.21□□□□□ -0.13
SPIRE1-209ENST00000487491 PIP4P2Q8N4L2 257 aa14.21□□□□□ -0.13
SPIRE1-209ENST00000487491 PROM2Q8N271 834 aa14.19□□□□□ -0.14
SPIRE1-209ENST00000487491 STAG3Q9UJ98 1225 aa14.19□□□□□ -0.14
SPIRE1-209ENST00000487491 PRR29P0C7W0 189 aa14.18□□□□□ -0.14
SPIRE1-209ENST00000487491 PRKAR2AP13861 404 aaKnown RBP14.07□□□□□ -0.16
SPIRE1-209ENST00000487491 CHADLQ6NUI6 762 aa13.98□□□□□ -0.17
SPIRE1-209ENST00000487491 CREBZFQ9NS37 354 aa13.9□□□□□ -0.18
SPIRE1-209ENST00000487491 HAX1O00165 279 aa13.86□□□□□ -0.19
SPIRE1-209ENST00000487491 FARP1Q9Y4F1 1045 aaPredicted RBP13.86□□□□□ -0.19
SPIRE1-209ENST00000487491 FBXO3Q9UK99 471 aa13.85□□□□□ -0.19
SPIRE1-209ENST00000487491 MIER1Q8N108 512 aa13.8□□□□□ -0.2
SPIRE1-209ENST00000487491 PLEKHG5O94827 1062 aa13.76□□□□□ -0.21
SPIRE1-209ENST00000487491 PLCD3Q8N3E9 789 aa13.74□□□□□ -0.21
SPIRE1-209ENST00000487491 C19orf67A6NJJ6 358 aa13.73□□□□□ -0.21
SPIRE1-209ENST00000487491 MNX1P50219 401 aaPredicted RBP13.72□□□□□ -0.21
SPIRE1-209ENST00000487491 NPM1P06748 294 aaKnown RBP eCLIP13.71□□□□□ -0.21
SPIRE1-209ENST00000487491 EVX2Q03828 476 aa13.68□□□□□ -0.22
SPIRE1-209ENST00000487491 CD44P16070 742 aaKnown RBP13.65□□□□□ -0.22
SPIRE1-209ENST00000487491 SP7Q8TDD2 431 aaPredicted RBP13.65□□□□□ -0.22
SPIRE1-209ENST00000487491 VASPP50552 380 aaPredicted RBP13.63□□□□□ -0.23
SPIRE1-209ENST00000487491 ZBTB47Q9UFB7 747 aaPredicted RBP13.62□□□□□ -0.23
SPIRE1-209ENST00000487491 PAK3O75914 559 aaPredicted RBP13.55□□□□□ -0.24
SPIRE1-209ENST00000487491 ZRANB1Q9UGI0 708 aa13.54□□□□□ -0.24
SPIRE1-209ENST00000487491 KLHL34Q8N239 644 aa13.48□□□□□ -0.25
SPIRE1-209ENST00000487491 ZNF579Q8NAF0 562 aaKnown RBP13.46□□□□□ -0.25
SPIRE1-209ENST00000487491 TSPYL2Q9H2G4 693 aaPredicted RBP13.45□□□□□ -0.26
SPIRE1-209ENST00000487491 RASEFQ8IZ41 740 aa13.44□□□□□ -0.26
SPIRE1-209ENST00000487491 NUBP1P53384 320 aa13.43□□□□□ -0.26
SPIRE1-209ENST00000487491 GABBR2O75899 941 aa13.42□□□□□ -0.26
SPIRE1-209ENST00000487491 CLCN6P51797 869 aa13.42□□□□□ -0.26
SPIRE1-209ENST00000487491 IFNLR1Q8IU57 520 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms