RNA–Protein interactions for RNA: ENST00000486539.1

CACNA2D1-211, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 1, humanhuman

TSL 5

Gene CACNA2D1, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1-211ENST00000486539 V9GY48 417 aaPredicted RBP12.53□□□□□ -0.4
CACNA2D1-211ENST00000486539 FBXW7Q969H0 707 aa12.52□□□□□ -0.41
CACNA2D1-211ENST00000486539 PRKD2Q9BZL6 878 aa12.52□□□□□ -0.41
CACNA2D1-211ENST00000486539 KIAA1468Q9P260 1216 aa12.51□□□□□ -0.41
CACNA2D1-211ENST00000486539 COL9A1P20849 921 aa12.49□□□□□ -0.41
CACNA2D1-211ENST00000486539 ZNF775Q96BV0 537 aaPredicted RBP12.49□□□□□ -0.41
CACNA2D1-211ENST00000486539 LRCH3Q96II8 777 aa12.49□□□□□ -0.41
CACNA2D1-211ENST00000486539 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.49□□□□□ -0.41
CACNA2D1-211ENST00000486539 FAM98CQ17RN3 349 aaKnown RBP12.48□□□□□ -0.41
CACNA2D1-211ENST00000486539 RYDENQ9NUL5 291 aaKnown RBP12.48□□□□□ -0.41
CACNA2D1-211ENST00000486539 PDE4AP27815 886 aa12.47□□□□□ -0.41
CACNA2D1-211ENST00000486539 HPS5Q9UPZ3 1129 aa12.47□□□□□ -0.41
CACNA2D1-211ENST00000486539 PCDHGA10Q9Y5H3 936 aa12.47□□□□□ -0.41
CACNA2D1-211ENST00000486539 MAP3K9P80192 1104 aa12.46□□□□□ -0.41
CACNA2D1-211ENST00000486539 TYW1BQ6NUM6 668 aa12.46□□□□□ -0.41
CACNA2D1-211ENST00000486539 HS6ST3Q8IZP7 471 aa12.45□□□□□ -0.42
CACNA2D1-211ENST00000486539 PKD2Q13563 968 aa12.44□□□□□ -0.42
CACNA2D1-211ENST00000486539 PHF14O94880 888 aa12.42□□□□□ -0.42
CACNA2D1-211ENST00000486539 SEPT9Q9UHD8 586 aaPredicted RBP12.42□□□□□ -0.42
CACNA2D1-211ENST00000486539 PDZRN3Q9UPQ7 1066 aa12.42□□□□□ -0.42
CACNA2D1-211ENST00000486539 TRIM6-TRIM34B2RNG4 842 aa12.38□□□□□ -0.43
CACNA2D1-211ENST00000486539 TJAP1Q5JTD0 557 aa12.38□□□□□ -0.43
CACNA2D1-211ENST00000486539 PPP4CP60510 307 aa12.37□□□□□ -0.43
CACNA2D1-211ENST00000486539 NCKAP5LQ9HCH0 1330 aa12.37□□□□□ -0.43
CACNA2D1-211ENST00000486539 PPP1R18Q6NYC8 613 aa12.36□□□□□ -0.43
CACNA2D1-211ENST00000486539 IL21Q9HBE4 155 aa12.35□□□□□ -0.43
CACNA2D1-211ENST00000486539 DDX27Q96GQ7 796 aaKnown RBP12.34□□□□□ -0.43
CACNA2D1-211ENST00000486539 C6orf132Q5T0Z8 1188 aa12.33□□□□□ -0.44
CACNA2D1-211ENST00000486539 EPAS1Q99814 870 aa12.33□□□□□ -0.44
CACNA2D1-211ENST00000486539 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.33□□□□□ -0.44
CACNA2D1-211ENST00000486539 DNAJC5Q9H3Z4 198 aa12.3□□□□□ -0.44
CACNA2D1-211ENST00000486539 MTRQ99707 1265 aa12.29□□□□□ -0.44
CACNA2D1-211ENST00000486539 LARP6Q9BRS8 491 aaKnown RBP12.28□□□□□ -0.44
CACNA2D1-211ENST00000486539 GGCXP38435 758 aa12.27□□□□□ -0.45
CACNA2D1-211ENST00000486539 PACS2Q86VP3 889 aa12.27□□□□□ -0.45
CACNA2D1-211ENST00000486539 MFSD10Q14728 455 aa12.25□□□□□ -0.45
CACNA2D1-211ENST00000486539 EMILIN3Q9NT22 766 aa12.23□□□□□ -0.45
CACNA2D1-211ENST00000486539 CHGAP10645 457 aaKnown RBP12.21□□□□□ -0.45
CACNA2D1-211ENST00000486539 TMUB1Q9BVT8 246 aa12.21□□□□□ -0.45
CACNA2D1-211ENST00000486539 PKDCCQ504Y2 493 aa12.2□□□□□ -0.46
CACNA2D1-211ENST00000486539 DGAT1O75907 488 aa12.19□□□□□ -0.46
CACNA2D1-211ENST00000486539 NKX1-1Q15270 411 aaPredicted RBP12.18□□□□□ -0.46
CACNA2D1-211ENST00000486539 SAMD7Q7Z3H4 446 aa12.17□□□□□ -0.46
CACNA2D1-211ENST00000486539 TREML4Q6UXN2 200 aa12.16□□□□□ -0.46
CACNA2D1-211ENST00000486539 MYT1Q01538 1121 aa12.15□□□□□ -0.46
CACNA2D1-211ENST00000486539 ZNF516Q92618 1163 aa12.14□□□□□ -0.47
CACNA2D1-211ENST00000486539 NECTIN2Q92692 538 aa12.14□□□□□ -0.47
CACNA2D1-211ENST00000486539 TSKSQ9UJT2 592 aa12.14□□□□□ -0.47
CACNA2D1-211ENST00000486539 RBM33Q96EV2 1170 aaKnown RBP12.12□□□□□ -0.47
CACNA2D1-211ENST00000486539 HDGFP51858 240 aaKnown RBP12.09□□□□□ -0.47
CACNA2D1-211ENST00000486539 PRR20EP86478 221 aa12.09□□□□□ -0.47
CACNA2D1-211ENST00000486539 PRR20CP86479 221 aa12.09□□□□□ -0.47
CACNA2D1-211ENST00000486539 PRR20DP86480 221 aa12.09□□□□□ -0.47
CACNA2D1-211ENST00000486539 PRR20BP86481 221 aa12.09□□□□□ -0.47
CACNA2D1-211ENST00000486539 PRR20AP86496 221 aa12.09□□□□□ -0.47
CACNA2D1-211ENST00000486539 LCE2AQ5TA79 106 aaPredicted RBP12.09□□□□□ -0.47
CACNA2D1-211ENST00000486539 TRIM67Q6ZTA4 783 aa12.08□□□□□ -0.48
CACNA2D1-211ENST00000486539 STK17AQ9UEE5 414 aa12.07□□□□□ -0.48
CACNA2D1-211ENST00000486539 POTECB2RU33 542 aa12.06□□□□□ -0.48
CACNA2D1-211ENST00000486539 SLC19A1P41440 591 aa12.06□□□□□ -0.48
CACNA2D1-211ENST00000486539 NKX2-3Q8TAU0 364 aa12.06□□□□□ -0.48
CACNA2D1-211ENST00000486539 NBPF26B4DH59 902 aa12.05□□□□□ -0.48
CACNA2D1-211ENST00000486539 EN1Q05925 392 aaPredicted RBP12.05□□□□□ -0.48
CACNA2D1-211ENST00000486539 APLP1P51693 650 aa12.04□□□□□ -0.48
CACNA2D1-211ENST00000486539 CERKQ8TCT0 537 aa12.04□□□□□ -0.48
CACNA2D1-211ENST00000486539 MAP3K7O43318 606 aa12.03□□□□□ -0.48
CACNA2D1-211ENST00000486539 CDCA7LQ96GN5 454 aa12.03□□□□□ -0.48
CACNA2D1-211ENST00000486539 SMAPO00193 183 aa12.01□□□□□ -0.49
CACNA2D1-211ENST00000486539 RNF40O75150 1001 aa12.01□□□□□ -0.49
CACNA2D1-211ENST00000486539 PRSS12P56730 875 aa12.01□□□□□ -0.49
CACNA2D1-211ENST00000486539 ZNF598Q86UK7 904 aaKnown RBP12.01□□□□□ -0.49
CACNA2D1-211ENST00000486539 CAMK2BQ13554 666 aa12□□□□□ -0.49
CACNA2D1-211ENST00000486539 DDX12PQ92771 950 aa12□□□□□ -0.49
CACNA2D1-211ENST00000486539 TATDN2Q93075 761 aa12□□□□□ -0.49
CACNA2D1-211ENST00000486539 SPRYD7Q5W111 196 aa11.99□□□□□ -0.49
CACNA2D1-211ENST00000486539 DPYSL4O14531 572 aa11.98□□□□□ -0.49
CACNA2D1-211ENST00000486539 NBR1Q14596 966 aa11.98□□□□□ -0.49
CACNA2D1-211ENST00000486539 TSR1Q2NL82 804 aaKnown RBP11.98□□□□□ -0.49
CACNA2D1-211ENST00000486539 FAM187AA6NFU0 413 aa11.97□□□□□ -0.49
CACNA2D1-211ENST00000486539 ZPR1O75312 459 aa11.97□□□□□ -0.49
CACNA2D1-211ENST00000486539 COPS2P61201 443 aa11.97□□□□□ -0.49
CACNA2D1-211ENST00000486539 PNMA3Q9UL41 463 aa11.97□□□□□ -0.49
CACNA2D1-211ENST00000486539 INSM1Q01101 510 aaPredicted RBP11.96□□□□□ -0.49
CACNA2D1-211ENST00000486539 GTPBP6O43824 516 aaPredicted RBP11.95□□□□□ -0.5
CACNA2D1-211ENST00000486539 PRR14Q9BWN1 585 aa11.95□□□□□ -0.5
CACNA2D1-211ENST00000486539 RNF223E7ERA6 249 aa11.94□□□□□ -0.5
CACNA2D1-211ENST00000486539 WFS1O76024 890 aa11.94□□□□□ -0.5
CACNA2D1-211ENST00000486539 SLC4A3P48751 1232 aa11.94□□□□□ -0.5
CACNA2D1-211ENST00000486539 SLF2Q8IX21 1173 aa11.94□□□□□ -0.5
CACNA2D1-211ENST00000486539 ANKLE1Q8NAG6 615 aa11.92□□□□□ -0.5
CACNA2D1-211ENST00000486539 ZNF697Q5TEC3 545 aa11.91□□□□□ -0.5
CACNA2D1-211ENST00000486539 AAASQ9NRG9 546 aa11.91□□□□□ -0.5
CACNA2D1-211ENST00000486539 FAM198AQ9UFP1 575 aa11.91□□□□□ -0.5
CACNA2D1-211ENST00000486539 WIPF1O43516 503 aa11.9□□□□□ -0.5
CACNA2D1-211ENST00000486539 EMID1Q96A84 441 aaPredicted RBP11.9□□□□□ -0.5
CACNA2D1-211ENST00000486539 RBM27Q9P2N5 1060 aaKnown RBP11.9□□□□□ -0.5
CACNA2D1-211ENST00000486539 GDF9O60383 454 aa11.88□□□□□ -0.51
CACNA2D1-211ENST00000486539 NUDT18Q6ZVK8 323 aa11.88□□□□□ -0.51
CACNA2D1-211ENST00000486539 ST8SIA5O15466 376 aa11.86□□□□□ -0.51
CACNA2D1-211ENST00000486539 CRIPAKQ8N1N5 446 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms