RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 SAMD9Q5K651 1589 aa9.07□□□□□ -0.96
COPS3-208ENST00000486032 HCSTQ9UBK5 93 aa9.06□□□□□ -0.96
COPS3-208ENST00000486032 PLB1Q6P1J6 1458 aa9.05□□□□□ -0.96
COPS3-208ENST00000486032 TNIKQ9UKE5 1360 aa9.05□□□□□ -0.96
COPS3-208ENST00000486032 LSM11P83369 360 aaKnown RBP eCLIP9.05□□□□□ -0.96
COPS3-208ENST00000486032 GPR153Q6NV75 609 aa9.05□□□□□ -0.96
COPS3-208ENST00000486032 KIF13AQ9H1H9 1805 aa9.05□□□□□ -0.96
COPS3-208ENST00000486032 ABCC2Q92887 1545 aa9.05□□□□□ -0.96
COPS3-208ENST00000486032 PTPRGP23470 1445 aa9.05□□□□□ -0.96
COPS3-208ENST00000486032 FHOD3Q2V2M9 1422 aa9.03□□□□□ -0.96
COPS3-208ENST00000486032 ABCA8O94911 1581 aa9.03□□□□□ -0.96
COPS3-208ENST00000486032 CARMIL2Q6F5E8 1435 aa9.02□□□□□ -0.97
COPS3-208ENST00000486032 ZCCHC11Q5TAX3 1644 aaKnown RBP9.02□□□□□ -0.97
COPS3-208ENST00000486032 DIP2BQ9P265 1576 aa9.01□□□□□ -0.97
COPS3-208ENST00000486032 UACAQ9BZF9 1416 aa9□□□□□ -0.97
COPS3-208ENST00000486032 ARID3CA6NKF2 412 aa9□□□□□ -0.97
COPS3-208ENST00000486032 GSE1Q14687 1217 aa9□□□□□ -0.97
COPS3-208ENST00000486032 CHRM1P11229 460 aaPredicted RBP8.99□□□□□ -0.97
COPS3-208ENST00000486032 CABP2Q9NPB3 220 aa8.99□□□□□ -0.97
COPS3-208ENST00000486032 UHRF1BP1LA0JNW5 1464 aa8.99□□□□□ -0.97
COPS3-208ENST00000486032 MAPKBP1O60336 1514 aa8.99□□□□□ -0.97
COPS3-208ENST00000486032 CLIP1P30622 1438 aa8.98□□□□□ -0.97
COPS3-208ENST00000486032 CEP162Q5TB80 1403 aa8.98□□□□□ -0.97
COPS3-208ENST00000486032 ARHGAP35Q9NRY4 1499 aa8.98□□□□□ -0.97
COPS3-208ENST00000486032 KDM5BQ9UGL1 1544 aa8.97□□□□□ -0.97
COPS3-208ENST00000486032 PDAP1Q13442 181 aaKnown RBP8.97□□□□□ -0.97
COPS3-208ENST00000486032 ATP1B4Q9UN42 357 aaPredicted RBP8.97□□□□□ -0.97
COPS3-208ENST00000486032 ZNF316A6NFI3 1004 aaPredicted RBP8.96□□□□□ -0.98
COPS3-208ENST00000486032 PPRC1Q5VV67 1664 aaKnown RBP8.96□□□□□ -0.98
COPS3-208ENST00000486032 ASXL2Q76L83 1435 aa8.96□□□□□ -0.98
COPS3-208ENST00000486032 ABCC10Q5T3U5 1492 aa8.96□□□□□ -0.98
COPS3-208ENST00000486032 RAPGEF6Q8TEU7 1601 aa8.95□□□□□ -0.98
COPS3-208ENST00000486032 LRRIQ1Q96JM4 1722 aa8.95□□□□□ -0.98
COPS3-208ENST00000486032 TSPOAP1O95153 1857 aa8.95□□□□□ -0.98
COPS3-208ENST00000486032 NUP153P49790 1475 aaKnown RBP8.95□□□□□ -0.98
COPS3-208ENST00000486032 EFCAB5A4FU69 1503 aa8.95□□□□□ -0.98
COPS3-208ENST00000486032 ARSIQ5FYB1 569 aa8.94□□□□□ -0.98
COPS3-208ENST00000486032 IRX2Q9BZI1 471 aaPredicted RBP8.94□□□□□ -0.98
COPS3-208ENST00000486032 ATP10BO94823 1461 aa8.93□□□□□ -0.98
COPS3-208ENST00000486032 CDK13Q14004 1512 aaKnown RBP8.93□□□□□ -0.98
COPS3-208ENST00000486032 EPRSP07814 1512 aaKnown RBP8.92□□□□□ -0.98
COPS3-208ENST00000486032 PBX2P40425 430 aa8.92□□□□□ -0.98
COPS3-208ENST00000486032 FAM69CQ0P6D2 419 aa8.92□□□□□ -0.98
COPS3-208ENST00000486032 PCF11O94913 1555 aaKnown RBP8.91□□□□□ -0.98
COPS3-208ENST00000486032 TMEM92Q6UXU6 159 aa8.91□□□□□ -0.98
COPS3-208ENST00000486032 RGS20O76081 388 aa8.9□□□□□ -0.98
COPS3-208ENST00000486032 WDR7Q9Y4E6 1490 aa8.89□□□□□ -0.99
COPS3-208ENST00000486032 MAP3K4Q9Y6R4 1608 aa8.89□□□□□ -0.99
COPS3-208ENST00000486032 GLI2P10070 1586 aa8.89□□□□□ -0.99
COPS3-208ENST00000486032 FMN1Q68DA7 1419 aa8.88□□□□□ -0.99
COPS3-208ENST00000486032 COL17A1Q9UMD9 1497 aaPredicted RBP8.88□□□□□ -0.99
COPS3-208ENST00000486032 MAGI3Q5TCQ9 1506 aa8.86□□□□□ -0.99
COPS3-208ENST00000486032 MICALL2Q8IY33 904 aa8.86□□□□□ -0.99
COPS3-208ENST00000486032 KHSRPQ92945 711 aaKnown RBP eCLIP8.86□□□□□ -0.99
COPS3-208ENST00000486032 KIF14Q15058 1648 aa8.85□□□□□ -0.99
COPS3-208ENST00000486032 KCNH8Q96L42 1107 aa8.85□□□□□ -0.99
COPS3-208ENST00000486032 VPS8Q8N3P4 1428 aa8.85□□□□□ -0.99
COPS3-208ENST00000486032 TTC37Q6PGP7 1564 aa8.85□□□□□ -0.99
COPS3-208ENST00000486032 HECW1Q76N89 1606 aa8.84□□□□□ -0.99
COPS3-208ENST00000486032 AXIN2Q9Y2T1 843 aa8.83□□□□□ -1
COPS3-208ENST00000486032 ABCA9Q8IUA7 1624 aa8.83□□□□□ -1
COPS3-208ENST00000486032 CFAP43Q8NDM7 1665 aa8.82□□□□□ -1
COPS3-208ENST00000486032 CASKIN1Q8WXD9 1431 aa8.82□□□□□ -1
COPS3-208ENST00000486032 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.82□□□□□ -1
COPS3-208ENST00000486032 KDM6BO15054 1643 aa8.82□□□□□ -1
COPS3-208ENST00000486032 ADGRD1Q6QNK2 874 aa8.81□□□□□ -1
COPS3-208ENST00000486032 POTEEQ6S8J3 1075 aa8.81□□□□□ -1
COPS3-208ENST00000486032 PPARGC1BQ86YN6 1023 aaKnown RBP8.81□□□□□ -1
COPS3-208ENST00000486032 KLHL34Q8N239 644 aa8.81□□□□□ -1
COPS3-208ENST00000486032 FYCO1Q9BQS8 1478 aa8.81□□□□□ -1
COPS3-208ENST00000486032 CD109Q6YHK3 1445 aa8.8□□□□□ -1
COPS3-208ENST00000486032 PLEKHD1A6NEE1 506 aa8.79□□□□□ -1
COPS3-208ENST00000486032 FRMPD1Q5SYB0 1578 aa8.78□□□□□ -1
COPS3-208ENST00000486032 EFCAB3Q8N7B9 438 aa8.78□□□□□ -1
COPS3-208ENST00000486032 CDK11AQ9UQ88 783 aaPredicted RBP8.78□□□□□ -1
COPS3-208ENST00000486032 CCDC18Q5T9S5 1454 aa8.77□□□□□ -1.01
COPS3-208ENST00000486032 MTUS2Q5JR59 1369 aa8.76□□□□□ -1.01
COPS3-208ENST00000486032 KANK4Q5T7N3 995 aaPredicted RBP8.75□□□□□ -1.01
COPS3-208ENST00000486032 SIGLEC1Q9BZZ2 1709 aa8.74□□□□□ -1.01
COPS3-208ENST00000486032 TIAM1Q13009 1591 aa8.74□□□□□ -1.01
COPS3-208ENST00000486032 TROQ12816 1431 aaPredicted RBP8.74□□□□□ -1.01
COPS3-208ENST00000486032 NUDT7P0C024 238 aa8.74□□□□□ -1.01
COPS3-208ENST00000486032 IFFO2Q5TF58 517 aa8.74□□□□□ -1.01
COPS3-208ENST00000486032 KCTD12Q96CX2 325 aaKnown RBP8.74□□□□□ -1.01
COPS3-208ENST00000486032 TEX14Q8IWB6 1497 aa8.73□□□□□ -1.01
COPS3-208ENST00000486032 ARHGAP33O14559 1287 aa8.73□□□□□ -1.01
COPS3-208ENST00000486032 LHX6Q9UPM6 363 aa8.73□□□□□ -1.01
COPS3-208ENST00000486032 CDC42BPBQ9Y5S2 1711 aa8.73□□□□□ -1.01
COPS3-208ENST00000486032 CDC42BPAQ5VT25 1732 aa8.72□□□□□ -1.01
COPS3-208ENST00000486032 MYO5CQ9NQX4 1742 aa8.72□□□□□ -1.01
COPS3-208ENST00000486032 FBXO3Q9UK99 471 aa8.72□□□□□ -1.01
COPS3-208ENST00000486032 RICTORQ6R327 1708 aa8.71□□□□□ -1.01
COPS3-208ENST00000486032 TK2O00142 265 aa8.71□□□□□ -1.02
COPS3-208ENST00000486032 RAPGEF3O95398 923 aa8.71□□□□□ -1.02
COPS3-208ENST00000486032 PREX2Q70Z35 1606 aa8.71□□□□□ -1.02
COPS3-208ENST00000486032 FANCAO15360 1455 aa8.7□□□□□ -1.02
COPS3-208ENST00000486032 LRRC9Q6ZRR7 1453 aa8.7□□□□□ -1.02
COPS3-208ENST00000486032 EHBP1L1Q8N3D4 1523 aa8.7□□□□□ -1.02
COPS3-208ENST00000486032 ARAP3Q8WWN8 1544 aa8.7□□□□□ -1.02
COPS3-208ENST00000486032 ARHGEF12Q9NZN5 1544 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 216 ms