RNA–Protein interactions for RNA: ENST00000485506.1

NECTIN3-207, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 2

Gene NECTIN3, Length 314 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-207ENST00000485506 EPAS1Q99814 870 aa11.15□□□□□ -0.62
NECTIN3-207ENST00000485506 ONECUT3O60422 494 aaPredicted RBP11.12□□□□□ -0.63
NECTIN3-207ENST00000485506 LAPTM4BQ86VI4 370 aa11.11□□□□□ -0.63
NECTIN3-207ENST00000485506 DPYSL4O14531 572 aa11.1□□□□□ -0.63
NECTIN3-207ENST00000485506 COL9A1P20849 921 aa11.1□□□□□ -0.63
NECTIN3-207ENST00000485506 ANKK1Q8NFD2 765 aa11.1□□□□□ -0.63
NECTIN3-207ENST00000485506 RGS20O76081 388 aa11.09□□□□□ -0.63
NECTIN3-207ENST00000485506 PROX2Q3B8N5 592 aa11.09□□□□□ -0.63
NECTIN3-207ENST00000485506 C6orf132Q5T0Z8 1188 aa11.08□□□□□ -0.64
NECTIN3-207ENST00000485506 AMER1Q5JTC6 1135 aaPredicted RBP11.07□□□□□ -0.64
NECTIN3-207ENST00000485506 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.06□□□□□ -0.64
NECTIN3-207ENST00000485506 SPRYD3Q8NCJ5 442 aa11.05□□□□□ -0.64
NECTIN3-207ENST00000485506 RTN4Q9NQC3 1192 aaKnown RBP11.05□□□□□ -0.64
NECTIN3-207ENST00000485506 KIAA1468Q9P260 1216 aa11.04□□□□□ -0.64
NECTIN3-207ENST00000485506 NYAP1Q6ZVC0 841 aa11.03□□□□□ -0.64
NECTIN3-207ENST00000485506 SPDYE16A6NNV3 312 aaPredicted RBP11.02□□□□□ -0.65
NECTIN3-207ENST00000485506 TRIM6-TRIM34B2RNG4 842 aa11.02□□□□□ -0.65
NECTIN3-207ENST00000485506 PDIA6Q15084 440 aa11.02□□□□□ -0.65
NECTIN3-207ENST00000485506 A0A0G2JS52 829 aa11.01□□□□□ -0.65
NECTIN3-207ENST00000485506 SOWAHBA6NEL2 793 aa11.01□□□□□ -0.65
NECTIN3-207ENST00000485506 DDX12PQ92771 950 aa11.01□□□□□ -0.65
NECTIN3-207ENST00000485506 ZFRQ96KR1 1074 aaKnown RBP11.01□□□□□ -0.65
NECTIN3-207ENST00000485506 EN1Q05925 392 aaPredicted RBP10.99□□□□□ -0.65
NECTIN3-207ENST00000485506 RBM33Q96EV2 1170 aaKnown RBP10.99□□□□□ -0.65
NECTIN3-207ENST00000485506 ITGBL1O95965 494 aaPredicted RBP10.98□□□□□ -0.65
NECTIN3-207ENST00000485506 BCAMP50895 628 aa10.98□□□□□ -0.65
NECTIN3-207ENST00000485506 NBR1Q14596 966 aa10.98□□□□□ -0.65
NECTIN3-207ENST00000485506 FAM98CQ17RN3 349 aaKnown RBP10.98□□□□□ -0.65
NECTIN3-207ENST00000485506 MAP3K7O43318 606 aa10.96□□□□□ -0.65
NECTIN3-207ENST00000485506 E2F4Q16254 413 aa10.96□□□□□ -0.65
NECTIN3-207ENST00000485506 PACS2Q86VP3 889 aa10.95□□□□□ -0.66
NECTIN3-207ENST00000485506 SEPT9Q9UHD8 586 aaPredicted RBP10.95□□□□□ -0.66
NECTIN3-207ENST00000485506 ARIH1Q9Y4X5 557 aaPredicted RBP10.95□□□□□ -0.66
NECTIN3-207ENST00000485506 WDR70Q9NW82 654 aa10.94□□□□□ -0.66
NECTIN3-207ENST00000485506 CERKQ8TCT0 537 aa10.93□□□□□ -0.66
NECTIN3-207ENST00000485506 LRCH3Q96II8 777 aa10.92□□□□□ -0.66
NECTIN3-207ENST00000485506 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.92□□□□□ -0.66
NECTIN3-207ENST00000485506 TSR1Q2NL82 804 aaKnown RBP10.91□□□□□ -0.66
NECTIN3-207ENST00000485506 WBP1LQ9NX94 342 aa10.91□□□□□ -0.66
NECTIN3-207ENST00000485506 TSR3Q9UJK0 312 aaKnown RBP10.91□□□□□ -0.66
NECTIN3-207ENST00000485506 PAXIP1Q6ZW49 1069 aaPredicted RBP10.89□□□□□ -0.67
NECTIN3-207ENST00000485506 TSKSQ9UJT2 592 aa10.89□□□□□ -0.67
NECTIN3-207ENST00000485506 KCNC4Q03721 635 aa10.88□□□□□ -0.67
NECTIN3-207ENST00000485506 CFAP44Q96MT7 982 aa10.88□□□□□ -0.67
NECTIN3-207ENST00000485506 IRX2Q9BZI1 471 aaPredicted RBP10.88□□□□□ -0.67
NECTIN3-207ENST00000485506 HPS5Q9UPZ3 1129 aa10.88□□□□□ -0.67
NECTIN3-207ENST00000485506 PRSS12P56730 875 aa10.87□□□□□ -0.67
NECTIN3-207ENST00000485506 CDCA7LQ96GN5 454 aa10.86□□□□□ -0.67
NECTIN3-207ENST00000485506 GRXCR2A6NFK2 248 aa10.84□□□□□ -0.67
NECTIN3-207ENST00000485506 NBPF26B4DH59 902 aa10.83□□□□□ -0.68
NECTIN3-207ENST00000485506 PPP4CP60510 307 aa10.82□□□□□ -0.68
NECTIN3-207ENST00000485506 RBM27Q9P2N5 1060 aaKnown RBP10.82□□□□□ -0.68
NECTIN3-207ENST00000485506 PRIM1P49642 420 aaKnown RBP10.8□□□□□ -0.68
NECTIN3-207ENST00000485506 TATDN2Q93075 761 aa10.8□□□□□ -0.68
NECTIN3-207ENST00000485506 OSBPP22059 807 aa10.79□□□□□ -0.68
NECTIN3-207ENST00000485506 SAMD7Q7Z3H4 446 aa10.78□□□□□ -0.68
NECTIN3-207ENST00000485506 FAM198AQ9UFP1 575 aa10.78□□□□□ -0.68
NECTIN3-207ENST00000485506 PNMA3Q9UL41 463 aa10.78□□□□□ -0.68
NECTIN3-207ENST00000485506 SMAPO00193 183 aa10.77□□□□□ -0.69
NECTIN3-207ENST00000485506 HDGFP51858 240 aaKnown RBP10.77□□□□□ -0.69
NECTIN3-207ENST00000485506 NECTIN2Q92692 538 aa10.75□□□□□ -0.69
NECTIN3-207ENST00000485506 CDHR5Q9HBB8 845 aa10.74□□□□□ -0.69
NECTIN3-207ENST00000485506 TJAP1Q5JTD0 557 aa10.72□□□□□ -0.69
NECTIN3-207ENST00000485506 NUDT18Q6ZVK8 323 aa10.72□□□□□ -0.69
NECTIN3-207ENST00000485506 TTC13Q8NBP0 860 aa10.71□□□□□ -0.69
NECTIN3-207ENST00000485506 C3orf80F5H4A9 247 aa10.7□□□□□ -0.7
NECTIN3-207ENST00000485506 IL21Q9HBE4 155 aa10.7□□□□□ -0.7
NECTIN3-207ENST00000485506 ARHGEF1Q92888 912 aaKnown RBP10.69□□□□□ -0.7
NECTIN3-207ENST00000485506 PADI6Q6TGC4 694 aa10.68□□□□□ -0.7
NECTIN3-207ENST00000485506 MTRQ99707 1265 aa10.68□□□□□ -0.7
NECTIN3-207ENST00000485506 RNF40O75150 1001 aa10.67□□□□□ -0.7
NECTIN3-207ENST00000485506 SLC4A3P48751 1232 aa10.67□□□□□ -0.7
NECTIN3-207ENST00000485506 LAPTM4AQ15012 233 aa10.67□□□□□ -0.7
NECTIN3-207ENST00000485506 NPDC1Q9NQX5 325 aaPredicted RBP10.67□□□□□ -0.7
NECTIN3-207ENST00000485506 SLF2Q8IX21 1173 aa10.66□□□□□ -0.7
NECTIN3-207ENST00000485506 APLP1P51693 650 aa10.63□□□□□ -0.71
NECTIN3-207ENST00000485506 Q6ZNB5 142 aa10.63□□□□□ -0.71
NECTIN3-207ENST00000485506 SWT1Q5T5J6 900 aaKnown RBP10.62□□□□□ -0.71
NECTIN3-207ENST00000485506 PRR14Q9BWN1 585 aa10.61□□□□□ -0.71
NECTIN3-207ENST00000485506 PPP1R18Q6NYC8 613 aa10.6□□□□□ -0.71
NECTIN3-207ENST00000485506 EYA1Q99502 592 aa10.6□□□□□ -0.71
NECTIN3-207ENST00000485506 KCNV2Q8TDN2 545 aa10.59□□□□□ -0.71
NECTIN3-207ENST00000485506 TSHZ2Q9NRE2 1034 aa10.59□□□□□ -0.71
NECTIN3-207ENST00000485506 V9GY48 417 aaPredicted RBP10.59□□□□□ -0.71
NECTIN3-207ENST00000485506 MLLT3P42568 568 aaPredicted RBP10.58□□□□□ -0.72
NECTIN3-207ENST00000485506 ZNF516Q92618 1163 aa10.58□□□□□ -0.72
NECTIN3-207ENST00000485506 PRKD2Q9BZL6 878 aa10.58□□□□□ -0.72
NECTIN3-207ENST00000485506 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.58□□□□□ -0.72
NECTIN3-207ENST00000485506 GGCXP38435 758 aa10.57□□□□□ -0.72
NECTIN3-207ENST00000485506 PTGDRQ13258 359 aa10.57□□□□□ -0.72
NECTIN3-207ENST00000485506 GFRA3O60609 400 aa10.56□□□□□ -0.72
NECTIN3-207ENST00000485506 P3H3Q8IVL6 736 aa10.56□□□□□ -0.72
NECTIN3-207ENST00000485506 RBM46Q8TBY0 533 aaKnown RBP10.55□□□□□ -0.72
NECTIN3-207ENST00000485506 DNAJB2P25686 324 aa10.54□□□□□ -0.72
NECTIN3-207ENST00000485506 TMUB1Q9BVT8 246 aa10.54□□□□□ -0.72
NECTIN3-207ENST00000485506 COPS2P61201 443 aa10.52□□□□□ -0.73
NECTIN3-207ENST00000485506 NRG2O14511 850 aaPredicted RBP10.51□□□□□ -0.73
NECTIN3-207ENST00000485506 ZPR1O75312 459 aa10.51□□□□□ -0.73
NECTIN3-207ENST00000485506 NKX2-3Q8TAU0 364 aa10.51□□□□□ -0.73
NECTIN3-207ENST00000485506 PCDHB3Q9Y5E6 796 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms