RNA–Protein interactions for RNA: ENST00000484933.6

LINC01140-206, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,368 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-206ENST00000484933 CDCA7LQ96GN5 454 aa13.24□□□□□ -0.29
LINC01140-206ENST00000484933 ARID3AQ99856 593 aa13.24□□□□□ -0.29
LINC01140-206ENST00000484933 PKD2Q13563 968 aa13.23□□□□□ -0.29
LINC01140-206ENST00000484933 ANKRD30BQ9BXX2 1392 aa13.23□□□□□ -0.29
LINC01140-206ENST00000484933 NUP160Q12769 1436 aa13.23□□□□□ -0.29
LINC01140-206ENST00000484933 MS4A1P11836 297 aa13.23□□□□□ -0.29
LINC01140-206ENST00000484933 PLEKHD1A6NEE1 506 aa13.22□□□□□ -0.29
LINC01140-206ENST00000484933 RRP9O43818 475 aaKnown RBP13.22□□□□□ -0.29
LINC01140-206ENST00000484933 ST20-MTHFSA0A0A6YYL1 179 aa13.21□□□□□ -0.29
LINC01140-206ENST00000484933 DHX29Q7Z478 1369 aaKnown RBP13.21□□□□□ -0.29
LINC01140-206ENST00000484933 CC2D1BQ5T0F9 858 aaKnown RBP13.2□□□□□ -0.3
LINC01140-206ENST00000484933 CDK13Q14004 1512 aaKnown RBP13.2□□□□□ -0.3
LINC01140-206ENST00000484933 SUPT6HQ7KZ85 1726 aaKnown RBP13.2□□□□□ -0.3
LINC01140-206ENST00000484933 RBM10P98175 930 aaKnown RBP13.2□□□□□ -0.3
LINC01140-206ENST00000484933 PANK2Q9BZ23 570 aa13.2□□□□□ -0.3
LINC01140-206ENST00000484933 MAGI3Q5TCQ9 1506 aa13.19□□□□□ -0.3
LINC01140-206ENST00000484933 DISP1Q96F81 1524 aa13.19□□□□□ -0.3
LINC01140-206ENST00000484933 RNF123Q5XPI4 1314 aa13.19□□□□□ -0.3
LINC01140-206ENST00000484933 SPRYD3Q8NCJ5 442 aa13.19□□□□□ -0.3
LINC01140-206ENST00000484933 PLPPR3Q6T4P5 718 aa13.18□□□□□ -0.3
LINC01140-206ENST00000484933 EHBP1L1Q8N3D4 1523 aa13.17□□□□□ -0.3
LINC01140-206ENST00000484933 RPRD2Q5VT52 1461 aaKnown RBP13.17□□□□□ -0.3
LINC01140-206ENST00000484933 CRBNQ96SW2 442 aa13.17□□□□□ -0.3
LINC01140-206ENST00000484933 RGL3Q3MIN7 710 aa13.17□□□□□ -0.3
LINC01140-206ENST00000484933 SPATA31E1Q6ZUB1 1445 aa13.16□□□□□ -0.3
LINC01140-206ENST00000484933 CFDP1Q9UEE9 299 aaPredicted RBP13.16□□□□□ -0.3
LINC01140-206ENST00000484933 UGGT2Q9NYU1 1516 aa13.16□□□□□ -0.3
LINC01140-206ENST00000484933 L1TD1Q5T7N2 865 aaKnown RBP13.15□□□□□ -0.3
LINC01140-206ENST00000484933 FAM69CQ0P6D2 419 aa13.14□□□□□ -0.31
LINC01140-206ENST00000484933 MYBBP1AQ9BQG0 1328 aaKnown RBP13.14□□□□□ -0.31
LINC01140-206ENST00000484933 TEX14Q8IWB6 1497 aa13.14□□□□□ -0.31
LINC01140-206ENST00000484933 DNAJC5Q9H3Z4 198 aa13.13□□□□□ -0.31
LINC01140-206ENST00000484933 CTTNBP2Q8WZ74 1663 aa13.13□□□□□ -0.31
LINC01140-206ENST00000484933 C20orf194Q5TEA3 1177 aa13.13□□□□□ -0.31
LINC01140-206ENST00000484933 GOLGA6L3A6NEY3 463 aa13.12□□□□□ -0.31
LINC01140-206ENST00000484933 XRCC6P12956 609 aaKnown RBP eCLIP13.12□□□□□ -0.31
LINC01140-206ENST00000484933 KIF15Q9NS87 1388 aa13.12□□□□□ -0.31
LINC01140-206ENST00000484933 HECW1Q76N89 1606 aa13.12□□□□□ -0.31
LINC01140-206ENST00000484933 LRRIQ1Q96JM4 1722 aa13.12□□□□□ -0.31
LINC01140-206ENST00000484933 ARHGEF11O15085 1522 aa13.11□□□□□ -0.31
LINC01140-206ENST00000484933 DAPK1P53355 1430 aa13.11□□□□□ -0.31
LINC01140-206ENST00000484933 FAM161AQ3B820 660 aa13.11□□□□□ -0.31
LINC01140-206ENST00000484933 ABCC5O15440 1437 aa13.1□□□□□ -0.31
LINC01140-206ENST00000484933 EPRSP07814 1512 aaKnown RBP13.1□□□□□ -0.31
LINC01140-206ENST00000484933 HNRNPMP52272 730 aaKnown RBP eCLIP13.09□□□□□ -0.31
LINC01140-206ENST00000484933 RALBP1Q15311 655 aa13.09□□□□□ -0.31
LINC01140-206ENST00000484933 CLCN1P35523 988 aa13.09□□□□□ -0.31
LINC01140-206ENST00000484933 NLRP13Q86W25 1043 aa13.09□□□□□ -0.31
LINC01140-206ENST00000484933 KIAA0556O60303 1618 aa13.08□□□□□ -0.31
LINC01140-206ENST00000484933 NUP155O75694 1391 aa13.08□□□□□ -0.32
LINC01140-206ENST00000484933 SENP3Q9H4L4 574 aaPredicted RBP13.07□□□□□ -0.32
LINC01140-206ENST00000484933 TRIM44Q96DX7 344 aaPredicted RBP13.07□□□□□ -0.32
LINC01140-206ENST00000484933 MIA2Q96PC5 1412 aa13.07□□□□□ -0.32
LINC01140-206ENST00000484933 TCOF1Q13428 1488 aaKnown RBP13.07□□□□□ -0.32
LINC01140-206ENST00000484933 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.07□□□□□ -0.32
LINC01140-206ENST00000484933 C8orf34Q49A92 452 aa13.06□□□□□ -0.32
LINC01140-206ENST00000484933 KTN1Q86UP2 1357 aaKnown RBP13.06□□□□□ -0.32
LINC01140-206ENST00000484933 BRD4O60885 1362 aaPredicted RBP13.06□□□□□ -0.32
LINC01140-206ENST00000484933 ROCK2O75116 1388 aaKnown RBP13.06□□□□□ -0.32
LINC01140-206ENST00000484933 BCORL1Q5H9F3 1711 aa13.05□□□□□ -0.32
LINC01140-206ENST00000484933 GCC2Q8IWJ2 1684 aa13.05□□□□□ -0.32
LINC01140-206ENST00000484933 NUP153P49790 1475 aaKnown RBP13.05□□□□□ -0.32
LINC01140-206ENST00000484933 AAMPQ13685 434 aa13.04□□□□□ -0.32
LINC01140-206ENST00000484933 NBPF1Q3BBV0 1214 aa13.04□□□□□ -0.32
LINC01140-206ENST00000484933 MYH16Q9H6N6 1097 aa13.04□□□□□ -0.32
LINC01140-206ENST00000484933 FAM13BQ9NYF5 915 aa13.04□□□□□ -0.32
LINC01140-206ENST00000484933 ATP10BO94823 1461 aa13.03□□□□□ -0.32
LINC01140-206ENST00000484933 ESPNB1AK53 854 aa13.03□□□□□ -0.32
LINC01140-206ENST00000484933 SAMD9Q5K651 1589 aa13.02□□□□□ -0.32
LINC01140-206ENST00000484933 KIAA1107Q9UPP5 1409 aa13.02□□□□□ -0.32
LINC01140-206ENST00000484933 PANK3Q9H999 370 aa13.02□□□□□ -0.32
LINC01140-206ENST00000484933 LRPPRCP42704 1394 aaKnown RBP13.02□□□□□ -0.33
LINC01140-206ENST00000484933 CLASP1Q7Z460 1538 aa13.02□□□□□ -0.33
LINC01140-206ENST00000484933 RAPGEF3O95398 923 aa13.02□□□□□ -0.33
LINC01140-206ENST00000484933 PDE3BQ13370 1112 aa13.02□□□□□ -0.33
LINC01140-206ENST00000484933 BECN1Q14457 450 aa13.02□□□□□ -0.33
LINC01140-206ENST00000484933 AFAP1Q8N556 730 aa13.01□□□□□ -0.33
LINC01140-206ENST00000484933 ZHX1Q9UKY1 873 aaPredicted RBP13.01□□□□□ -0.33
LINC01140-206ENST00000484933 PZPP20742 1482 aa13.01□□□□□ -0.33
LINC01140-206ENST00000484933 PRDM10Q9NQV6 1147 aa13.01□□□□□ -0.33
LINC01140-206ENST00000484933 ROCK1Q13464 1354 aa13□□□□□ -0.33
LINC01140-206ENST00000484933 PDCL3Q9H2J4 239 aa13□□□□□ -0.33
LINC01140-206ENST00000484933 ADAMTS8Q9UP79 889 aa13□□□□□ -0.33
LINC01140-206ENST00000484933 ERBB4Q15303 1308 aa13□□□□□ -0.33
LINC01140-206ENST00000484933 MLECQ14165 292 aa13□□□□□ -0.33
LINC01140-206ENST00000484933 KIAA1211Q6ZU35 1233 aa13□□□□□ -0.33
LINC01140-206ENST00000484933 FGD1P98174 961 aa13□□□□□ -0.33
LINC01140-206ENST00000484933 WDR43Q15061 677 aaKnown RBP eCLIP13□□□□□ -0.33
LINC01140-206ENST00000484933 CCDC146Q8IYE0 955 aa13□□□□□ -0.33
LINC01140-206ENST00000484933 SEC24BO95487 1268 aa12.99□□□□□ -0.33
LINC01140-206ENST00000484933 TSPY4P0CV99 314 aa12.99□□□□□ -0.33
LINC01140-206ENST00000484933 TSPY10P0CW01 314 aa12.99□□□□□ -0.33
LINC01140-206ENST00000484933 PDE4CQ08493 712 aa12.99□□□□□ -0.33
LINC01140-206ENST00000484933 RIMBP3CA6NJZ7 1639 aa12.99□□□□□ -0.33
LINC01140-206ENST00000484933 RIMBP3BA6NNM3 1639 aa12.99□□□□□ -0.33
LINC01140-206ENST00000484933 RIMBP3Q9UFD9 1639 aa12.99□□□□□ -0.33
LINC01140-206ENST00000484933 ZBTB7CA1YPR0 619 aa12.98□□□□□ -0.33
LINC01140-206ENST00000484933 CENPQQ7L2Z9 268 aaPredicted RBP12.98□□□□□ -0.33
LINC01140-206ENST00000484933 ANKRD30AQ9BXX3 1397 aa12.97□□□□□ -0.33
LINC01140-206ENST00000484933 AMER1Q5JTC6 1135 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms