RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 HRO43593 1189 aa16.11■□□□□ 0.17
UBR3-210ENST00000484596 VPS9D1Q9Y2B5 631 aa16.11■□□□□ 0.17
UBR3-210ENST00000484596 ZBED2Q9BTP6 218 aa16.09■□□□□ 0.17
UBR3-210ENST00000484596 SLC4A5Q9BY07 1137 aa16.09■□□□□ 0.17
UBR3-210ENST00000484596 VSIG10Q8N0Z9 540 aa16.08■□□□□ 0.16
UBR3-210ENST00000484596 RBM33Q96EV2 1170 aaKnown RBP16.07■□□□□ 0.16
UBR3-210ENST00000484596 NBR1Q14596 966 aa16.06■□□□□ 0.16
UBR3-210ENST00000484596 KCNV2Q8TDN2 545 aa16.06■□□□□ 0.16
UBR3-210ENST00000484596 COL9A1P20849 921 aa16.05■□□□□ 0.16
UBR3-210ENST00000484596 C6orf132Q5T0Z8 1188 aa16.05■□□□□ 0.16
UBR3-210ENST00000484596 PPP1R3GB7ZBB8 358 aa16.04■□□□□ 0.16
UBR3-210ENST00000484596 ARHGEF1Q92888 912 aaKnown RBP16.03■□□□□ 0.16
UBR3-210ENST00000484596 GRXCR2A6NFK2 248 aa16.02■□□□□ 0.16
UBR3-210ENST00000484596 STAC3Q96MF2 364 aa16.01■□□□□ 0.15
UBR3-210ENST00000484596 EN1Q05925 392 aaPredicted RBP16■□□□□ 0.15
UBR3-210ENST00000484596 BHMG1C9JSJ3 638 aaPredicted RBP15.97■□□□□ 0.15
UBR3-210ENST00000484596 MAP3K7O43318 606 aa15.97■□□□□ 0.15
UBR3-210ENST00000484596 PRIM1P49642 420 aaKnown RBP15.97■□□□□ 0.15
UBR3-210ENST00000484596 PROX2Q3B8N5 592 aa15.97■□□□□ 0.15
UBR3-210ENST00000484596 TSR1Q2NL82 804 aaKnown RBP15.96■□□□□ 0.15
UBR3-210ENST00000484596 OSBPP22059 807 aa15.94■□□□□ 0.14
UBR3-210ENST00000484596 P3H3Q8IVL6 736 aa15.93■□□□□ 0.14
UBR3-210ENST00000484596 RABGEF1Q9UJ41 708 aa15.9■□□□□ 0.14
UBR3-210ENST00000484596 MRPL50Q8N5N7 158 aaKnown RBP15.89■□□□□ 0.13
UBR3-210ENST00000484596 KCTD12Q96CX2 325 aaKnown RBP15.89■□□□□ 0.13
UBR3-210ENST00000484596 KDM2AQ9Y2K7 1162 aa15.89■□□□□ 0.13
UBR3-210ENST00000484596 MLLT3P42568 568 aaPredicted RBP15.88■□□□□ 0.13
UBR3-210ENST00000484596 NBPF3Q9H094 633 aa15.87■□□□□ 0.13
UBR3-210ENST00000484596 KIAA1468Q9P260 1216 aa15.87■□□□□ 0.13
UBR3-210ENST00000484596 ONECUT3O60422 494 aaPredicted RBP15.85■□□□□ 0.13
UBR3-210ENST00000484596 TRIM6-TRIM34B2RNG4 842 aa15.84■□□□□ 0.13
UBR3-210ENST00000484596 GOLGA8CPA6NN73 597 aa15.83■□□□□ 0.12
UBR3-210ENST00000484596 HCSTQ9UBK5 93 aa15.83■□□□□ 0.12
UBR3-210ENST00000484596 CDHR5Q9HBB8 845 aa15.82■□□□□ 0.12
UBR3-210ENST00000484596 SEMA3EO15041 775 aa15.79■□□□□ 0.12
UBR3-210ENST00000484596 WNT2BQ93097 391 aa15.79■□□□□ 0.12
UBR3-210ENST00000484596 TSKSQ9UJT2 592 aa15.79■□□□□ 0.12
UBR3-210ENST00000484596 CERKQ8TCT0 537 aa15.78■□□□□ 0.12
UBR3-210ENST00000484596 CDCA7LQ96GN5 454 aa15.78■□□□□ 0.12
UBR3-210ENST00000484596 PRSS12P56730 875 aa15.77■□□□□ 0.12
UBR3-210ENST00000484596 SEPT9Q9UHD8 586 aaPredicted RBP15.77■□□□□ 0.12
UBR3-210ENST00000484596 THSD4Q6ZMP0 1018 aa15.75■□□□□ 0.11
UBR3-210ENST00000484596 LAPTM4BQ86VI4 370 aa15.75■□□□□ 0.11
UBR3-210ENST00000484596 PTPN5P54829 565 aa15.74■□□□□ 0.11
UBR3-210ENST00000484596 PACS2Q86VP3 889 aa15.74■□□□□ 0.11
UBR3-210ENST00000484596 NPDC1Q9NQX5 325 aaPredicted RBP15.74■□□□□ 0.11
UBR3-210ENST00000484596 FAM198AQ9UFP1 575 aa15.74■□□□□ 0.11
UBR3-210ENST00000484596 ZFRQ96KR1 1074 aaKnown RBP15.7■□□□□ 0.1
UBR3-210ENST00000484596 ANKK1Q8NFD2 765 aa15.69■□□□□ 0.1
UBR3-210ENST00000484596 FAM98CQ17RN3 349 aaKnown RBP15.68■□□□□ 0.1
UBR3-210ENST00000484596 C3orf80F5H4A9 247 aa15.67■□□□□ 0.1
UBR3-210ENST00000484596 SMAPO00193 183 aa15.67■□□□□ 0.1
UBR3-210ENST00000484596 RBM27Q9P2N5 1060 aaKnown RBP15.66■□□□□ 0.1
UBR3-210ENST00000484596 TESPA1A2RU30 521 aaPredicted RBP15.65■□□□□ 0.1
UBR3-210ENST00000484596 BCANQ96GW7 911 aa15.65■□□□□ 0.1
UBR3-210ENST00000484596 BCAMP50895 628 aa15.64■□□□□ 0.09
UBR3-210ENST00000484596 TATDN2Q93075 761 aa15.64■□□□□ 0.09
UBR3-210ENST00000484596 PADI6Q6TGC4 694 aa15.63■□□□□ 0.09
UBR3-210ENST00000484596 TTC13Q8NBP0 860 aa15.63■□□□□ 0.09
UBR3-210ENST00000484596 NUTM2FA1L443 756 aa15.62■□□□□ 0.09
UBR3-210ENST00000484596 SOWAHBA6NEL2 793 aa15.62■□□□□ 0.09
UBR3-210ENST00000484596 PNMA3Q9UL41 463 aa15.62■□□□□ 0.09
UBR3-210ENST00000484596 NBPF26B4DH59 902 aa15.61■□□□□ 0.09
UBR3-210ENST00000484596 PTGDRQ13258 359 aa15.61■□□□□ 0.09
UBR3-210ENST00000484596 NUDT18Q6ZVK8 323 aa15.6■□□□□ 0.09
UBR3-210ENST00000484596 PLA2G2EQ9NZK7 142 aa15.6■□□□□ 0.09
UBR3-210ENST00000484596 SMYD5Q6GMV2 418 aa15.57■□□□□ 0.08
UBR3-210ENST00000484596 RBM26Q5T8P6 1007 aaKnown RBP15.56■□□□□ 0.08
UBR3-210ENST00000484596 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.56■□□□□ 0.08
UBR3-210ENST00000484596 LRCH3Q96II8 777 aa15.55■□□□□ 0.08
UBR3-210ENST00000484596 SAMD7Q7Z3H4 446 aa15.53■□□□□ 0.08
UBR3-210ENST00000484596 FCHSD2O94868 740 aa15.52■□□□□ 0.08
UBR3-210ENST00000484596 WBP1LQ9NX94 342 aa15.52■□□□□ 0.08
UBR3-210ENST00000484596 HPS5Q9UPZ3 1129 aa15.5■□□□□ 0.07
UBR3-210ENST00000484596 TSR3Q9UJK0 312 aaKnown RBP15.49■□□□□ 0.07
UBR3-210ENST00000484596 EYA1Q99502 592 aa15.48■□□□□ 0.07
UBR3-210ENST00000484596 HDGFP51858 240 aaKnown RBP15.44■□□□□ 0.06
UBR3-210ENST00000484596 NYAP1Q6ZVC0 841 aa15.44■□□□□ 0.06
UBR3-210ENST00000484596 ADGRG1Q9Y653 693 aa15.44■□□□□ 0.06
UBR3-210ENST00000484596 PPP4CP60510 307 aa15.43■□□□□ 0.06
UBR3-210ENST00000484596 FAM161AQ3B820 660 aa15.43■□□□□ 0.06
UBR3-210ENST00000484596 HIC1Q14526 733 aa15.42■□□□□ 0.06
UBR3-210ENST00000484596 SWT1Q5T5J6 900 aaKnown RBP15.41■□□□□ 0.06
UBR3-210ENST00000484596 GPR37O15354 613 aa15.39■□□□□ 0.05
UBR3-210ENST00000484596 RBM46Q8TBY0 533 aaKnown RBP15.39■□□□□ 0.05
UBR3-210ENST00000484596 RNF40O75150 1001 aa15.38■□□□□ 0.05
UBR3-210ENST00000484596 GNPATO15228 680 aa15.36■□□□□ 0.05
UBR3-210ENST00000484596 FECHP22830 423 aa15.36■□□□□ 0.05
UBR3-210ENST00000484596 IFFO2Q5TF58 517 aa15.36■□□□□ 0.05
UBR3-210ENST00000484596 DNAJB2P25686 324 aa15.34■□□□□ 0.05
UBR3-210ENST00000484596 GPIHBP1Q8IV16 184 aa15.34■□□□□ 0.05
UBR3-210ENST00000484596 ITGBL1O95965 494 aaPredicted RBP15.33■□□□□ 0.04
UBR3-210ENST00000484596 RCCD1A6NED2 376 aa15.32■□□□□ 0.04
UBR3-210ENST00000484596 SLF2Q8IX21 1173 aa15.32■□□□□ 0.04
UBR3-210ENST00000484596 TULP1O00294 542 aaPredicted RBP15.31■□□□□ 0.04
UBR3-210ENST00000484596 OATP04181 439 aa15.3■□□□□ 0.04
UBR3-210ENST00000484596 TMEM134Q9H6X4 195 aa15.3■□□□□ 0.04
UBR3-210ENST00000484596 PXYLP1Q8TE99 480 aa15.29■□□□□ 0.04
UBR3-210ENST00000484596 SLC4A3P48751 1232 aa15.27■□□□□ 0.04
UBR3-210ENST00000484596 APLP1P51693 650 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms