RNA–Protein interactions for RNA: ENST00000484398.1

CAB39-205, Transcript of calcium binding protein 39, humanhuman

TSL 4

Gene CAB39, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-205ENST00000484398 VPS9D1Q9Y2B5 631 aa17.02■□□□□ 0.32
CAB39-205ENST00000484398 PLCB2Q00722 1185 aa17.01■□□□□ 0.31
CAB39-205ENST00000484398 ZBED2Q9BTP6 218 aa16.98■□□□□ 0.31
CAB39-205ENST00000484398 PPP1R3GB7ZBB8 358 aa16.96■□□□□ 0.31
CAB39-205ENST00000484398 NBR1Q14596 966 aa16.94■□□□□ 0.3
CAB39-205ENST00000484398 RBM33Q96EV2 1170 aaKnown RBP16.93■□□□□ 0.3
CAB39-205ENST00000484398 C6orf132Q5T0Z8 1188 aa16.92■□□□□ 0.3
CAB39-205ENST00000484398 COL9A1P20849 921 aa16.9■□□□□ 0.3
CAB39-205ENST00000484398 GRXCR2A6NFK2 248 aa16.88■□□□□ 0.29
CAB39-205ENST00000484398 MAP3K7O43318 606 aa16.87■□□□□ 0.29
CAB39-205ENST00000484398 EN1Q05925 392 aaPredicted RBP16.87■□□□□ 0.29
CAB39-205ENST00000484398 BHMG1C9JSJ3 638 aaPredicted RBP16.86■□□□□ 0.29
CAB39-205ENST00000484398 ARHGEF1Q92888 912 aaKnown RBP16.86■□□□□ 0.29
CAB39-205ENST00000484398 NBPF3Q9H094 633 aa16.86■□□□□ 0.29
CAB39-205ENST00000484398 PROX2Q3B8N5 592 aa16.84■□□□□ 0.29
CAB39-205ENST00000484398 MRPL50Q8N5N7 158 aaKnown RBP16.84■□□□□ 0.29
CAB39-205ENST00000484398 KCNV2Q8TDN2 545 aa16.84■□□□□ 0.29
CAB39-205ENST00000484398 KCTD12Q96CX2 325 aaKnown RBP16.84■□□□□ 0.29
CAB39-205ENST00000484398 HCSTQ9UBK5 93 aa16.83■□□□□ 0.28
CAB39-205ENST00000484398 GOLGA8CPA6NN73 597 aa16.82■□□□□ 0.28
CAB39-205ENST00000484398 RABGEF1Q9UJ41 708 aa16.82■□□□□ 0.28
CAB39-205ENST00000484398 P3H3Q8IVL6 736 aa16.8■□□□□ 0.28
CAB39-205ENST00000484398 TSR1Q2NL82 804 aaKnown RBP16.79■□□□□ 0.28
CAB39-205ENST00000484398 HAP1P54257 671 aaPredicted RBP16.78■□□□□ 0.28
CAB39-205ENST00000484398 ONECUT3O60422 494 aaPredicted RBP16.76■□□□□ 0.27
CAB39-205ENST00000484398 KIAA1468Q9P260 1216 aa16.75■□□□□ 0.27
CAB39-205ENST00000484398 OSBPP22059 807 aa16.74■□□□□ 0.27
CAB39-205ENST00000484398 TRIM6-TRIM34B2RNG4 842 aa16.73■□□□□ 0.27
CAB39-205ENST00000484398 WNT2BQ93097 391 aa16.73■□□□□ 0.27
CAB39-205ENST00000484398 PRIM1P49642 420 aaKnown RBP16.72■□□□□ 0.27
CAB39-205ENST00000484398 CERKQ8TCT0 537 aa16.71■□□□□ 0.27
CAB39-205ENST00000484398 LAPTM4BQ86VI4 370 aa16.69■□□□□ 0.26
CAB39-205ENST00000484398 PTPN5P54829 565 aa16.67■□□□□ 0.26
CAB39-205ENST00000484398 THSD4Q6ZMP0 1018 aa16.67■□□□□ 0.26
CAB39-205ENST00000484398 PACS2Q86VP3 889 aa16.66■□□□□ 0.26
CAB39-205ENST00000484398 MLLT3P42568 568 aaPredicted RBP16.64■□□□□ 0.25
CAB39-205ENST00000484398 PRSS12P56730 875 aa16.64■□□□□ 0.25
CAB39-205ENST00000484398 ANKK1Q8NFD2 765 aa16.64■□□□□ 0.25
CAB39-205ENST00000484398 CDCA7LQ96GN5 454 aa16.64■□□□□ 0.25
CAB39-205ENST00000484398 SEPT9Q9UHD8 586 aaPredicted RBP16.64■□□□□ 0.25
CAB39-205ENST00000484398 TSKSQ9UJT2 592 aa16.63■□□□□ 0.25
CAB39-205ENST00000484398 CDHR5Q9HBB8 845 aa16.62■□□□□ 0.25
CAB39-205ENST00000484398 FAM98CQ17RN3 349 aaKnown RBP16.6■□□□□ 0.25
CAB39-205ENST00000484398 ZFRQ96KR1 1074 aaKnown RBP16.6■□□□□ 0.25
CAB39-205ENST00000484398 PLA2G2EQ9NZK7 142 aa16.57■□□□□ 0.24
CAB39-205ENST00000484398 RBM27Q9P2N5 1060 aaKnown RBP16.55■□□□□ 0.24
CAB39-205ENST00000484398 SEMA3EO15041 775 aa16.54■□□□□ 0.24
CAB39-205ENST00000484398 NBPF26B4DH59 902 aa16.53■□□□□ 0.24
CAB39-205ENST00000484398 SOWAHBA6NEL2 793 aa16.52■□□□□ 0.24
CAB39-205ENST00000484398 BCAMP50895 628 aa16.52■□□□□ 0.24
CAB39-205ENST00000484398 FAM198AQ9UFP1 575 aa16.52■□□□□ 0.24
CAB39-205ENST00000484398 KDM2AQ9Y2K7 1162 aa16.52■□□□□ 0.24
CAB39-205ENST00000484398 NPDC1Q9NQX5 325 aaPredicted RBP16.51■□□□□ 0.23
CAB39-205ENST00000484398 SMAPO00193 183 aa16.49■□□□□ 0.23
CAB39-205ENST00000484398 TATDN2Q93075 761 aa16.49■□□□□ 0.23
CAB39-205ENST00000484398 PNMA3Q9UL41 463 aa16.49■□□□□ 0.23
CAB39-205ENST00000484398 LRCH3Q96II8 777 aa16.48■□□□□ 0.23
CAB39-205ENST00000484398 VSIG10Q8N0Z9 540 aa16.47■□□□□ 0.23
CAB39-205ENST00000484398 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.47■□□□□ 0.23
CAB39-205ENST00000484398 NUTM2FA1L443 756 aa16.46■□□□□ 0.23
CAB39-205ENST00000484398 PADI6Q6TGC4 694 aa16.46■□□□□ 0.23
CAB39-205ENST00000484398 SMYD5Q6GMV2 418 aa16.44■□□□□ 0.22
CAB39-205ENST00000484398 NUDT18Q6ZVK8 323 aa16.44■□□□□ 0.22
CAB39-205ENST00000484398 PTGDRQ13258 359 aa16.43■□□□□ 0.22
CAB39-205ENST00000484398 TTC13Q8NBP0 860 aa16.43■□□□□ 0.22
CAB39-205ENST00000484398 TESPA1A2RU30 521 aaPredicted RBP16.41■□□□□ 0.22
CAB39-205ENST00000484398 C3orf80F5H4A9 247 aa16.41■□□□□ 0.22
CAB39-205ENST00000484398 NYAP1Q6ZVC0 841 aa16.41■□□□□ 0.22
CAB39-205ENST00000484398 WBP1LQ9NX94 342 aa16.4■□□□□ 0.22
CAB39-205ENST00000484398 TSR3Q9UJK0 312 aaKnown RBP16.4■□□□□ 0.22
CAB39-205ENST00000484398 HPS5Q9UPZ3 1129 aa16.4■□□□□ 0.22
CAB39-205ENST00000484398 SAMD7Q7Z3H4 446 aa16.39■□□□□ 0.21
CAB39-205ENST00000484398 HDGFP51858 240 aaKnown RBP16.38■□□□□ 0.21
CAB39-205ENST00000484398 FCHSD2O94868 740 aa16.36■□□□□ 0.21
CAB39-205ENST00000484398 PPP4CP60510 307 aa16.34■□□□□ 0.21
CAB39-205ENST00000484398 RBM26Q5T8P6 1007 aaKnown RBP16.31■□□□□ 0.2
CAB39-205ENST00000484398 IFFO2Q5TF58 517 aa16.3■□□□□ 0.2
CAB39-205ENST00000484398 RNF40O75150 1001 aa16.29■□□□□ 0.2
CAB39-205ENST00000484398 EYA1Q99502 592 aa16.29■□□□□ 0.2
CAB39-205ENST00000484398 SLC4A3P48751 1232 aa16.26■□□□□ 0.19
CAB39-205ENST00000484398 RBM46Q8TBY0 533 aaKnown RBP16.26■□□□□ 0.19
CAB39-205ENST00000484398 ITGBL1O95965 494 aaPredicted RBP16.25■□□□□ 0.19
CAB39-205ENST00000484398 SWT1Q5T5J6 900 aaKnown RBP16.25■□□□□ 0.19
CAB39-205ENST00000484398 ADGRG1Q9Y653 693 aa16.25■□□□□ 0.19
CAB39-205ENST00000484398 HIC1Q14526 733 aa16.24■□□□□ 0.19
CAB39-205ENST00000484398 NECTIN2Q92692 538 aa16.23■□□□□ 0.19
CAB39-205ENST00000484398 SLF2Q8IX21 1173 aa16.22■□□□□ 0.19
CAB39-205ENST00000484398 TULP1O00294 542 aaPredicted RBP16.19■□□□□ 0.18
CAB39-205ENST00000484398 DNAJB2P25686 324 aa16.19■□□□□ 0.18
CAB39-205ENST00000484398 KCNC4Q03721 635 aa16.19■□□□□ 0.18
CAB39-205ENST00000484398 FAM161AQ3B820 660 aa16.19■□□□□ 0.18
CAB39-205ENST00000484398 GNPATO15228 680 aa16.16■□□□□ 0.18
CAB39-205ENST00000484398 A0A0G2JS52 829 aa16.15■□□□□ 0.18
CAB39-205ENST00000484398 OATP04181 439 aa16.15■□□□□ 0.18
CAB39-205ENST00000484398 RCCD1A6NED2 376 aa16.14■□□□□ 0.17
CAB39-205ENST00000484398 GPIHBP1Q8IV16 184 aa16.14■□□□□ 0.17
CAB39-205ENST00000484398 TMEM134Q9H6X4 195 aa16.13■□□□□ 0.17
CAB39-205ENST00000484398 GPR37O15354 613 aa16.11■□□□□ 0.17
CAB39-205ENST00000484398 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.1■□□□□ 0.17
CAB39-205ENST00000484398 APLP1P51693 650 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 624 ms