RNA–Protein interactions for RNA: ENST00000484398.1

CAB39-205, Transcript of calcium binding protein 39, humanhuman

TSL 4

Gene CAB39, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-205ENST00000484398 AEBP2Q6ZN18 517 aaPredicted RBP40.13■■■■■ 4.01
CAB39-205ENST00000484398 CHIC1Q5VXU3 224 aa38.67■■■■□ 3.78
CAB39-205ENST00000484398 SENP3Q9H4L4 574 aaPredicted RBP34.25■■■■□ 3.07
CAB39-205ENST00000484398 PHF23Q9BUL5 403 aaPredicted RBP33.89■■■■□ 3.02
CAB39-205ENST00000484398 FOXD1Q16676 465 aa31.79■■■□□ 2.68
CAB39-205ENST00000484398 PLPPR3Q6T4P5 718 aa31.19■■■□□ 2.58
CAB39-205ENST00000484398 PPP6R1Q9UPN7 881 aa30.1■■■□□ 2.41
CAB39-205ENST00000484398 ADRA2BP18089 450 aa30.07■■■□□ 2.4
CAB39-205ENST00000484398 PIAS4Q8N2W9 510 aaPredicted RBP29.9■■■□□ 2.38
CAB39-205ENST00000484398 MSH5O43196 834 aa29.63■■■□□ 2.33
CAB39-205ENST00000484398 POTEDQ86YR6 584 aa27.96■■■□□ 2.07
CAB39-205ENST00000484398 SCAF1Q9H7N4 1312 aaKnown RBP27.63■■■□□ 2.01
CAB39-205ENST00000484398 MAPK8IP2Q13387 824 aaPredicted RBP27.45■■□□□ 1.98
CAB39-205ENST00000484398 PPP4R3CPQ6ZMV5 832 aa27.37■■□□□ 1.97
CAB39-205ENST00000484398 DMRT2Q9Y5R5 561 aa27.21■■□□□ 1.95
CAB39-205ENST00000484398 CNKSR2Q8WXI2 1034 aa26.76■■□□□ 1.87
CAB39-205ENST00000484398 NCBP3Q53F19 620 aaKnown RBP26.55■■□□□ 1.84
CAB39-205ENST00000484398 HOXD11P31277 338 aaPredicted RBP26.4■■□□□ 1.82
CAB39-205ENST00000484398 RNF216Q9NWF9 866 aaPredicted RBP26.38■■□□□ 1.81
CAB39-205ENST00000484398 DCAF8L1A6NGE4 600 aa26.14■■□□□ 1.78
CAB39-205ENST00000484398 NPM3O75607 178 aaKnown RBP26.08■■□□□ 1.77
CAB39-205ENST00000484398 KCNA4P22459 653 aa26.04■■□□□ 1.76
CAB39-205ENST00000484398 DNAJC5BQ9UF47 199 aa25.42■■□□□ 1.66
CAB39-205ENST00000484398 RNF39Q9H2S5 420 aa25.29■■□□□ 1.64
CAB39-205ENST00000484398 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.23■■□□□ 1.63
CAB39-205ENST00000484398 CACNB1Q02641 598 aaPredicted RBP25.11■■□□□ 1.61
CAB39-205ENST00000484398 C1QBPQ07021 282 aaKnown RBP24.99■■□□□ 1.59
CAB39-205ENST00000484398 SLC4A2P04920 1241 aa24.74■■□□□ 1.55
CAB39-205ENST00000484398 SLC4A1APQ9BWU0 796 aaKnown RBP24.74■■□□□ 1.55
CAB39-205ENST00000484398 U3KPZ7 1027 aaPredicted RBP24.69■■□□□ 1.54
CAB39-205ENST00000484398 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.27■■□□□ 1.48
CAB39-205ENST00000484398 HNRNPUL2Q1KMD3 747 aaKnown RBP24.27■■□□□ 1.48
CAB39-205ENST00000484398 APLP2Q06481 763 aa24.18■■□□□ 1.46
CAB39-205ENST00000484398 FOXD4L1Q9NU39 408 aa24.18■■□□□ 1.46
CAB39-205ENST00000484398 CAPN15O75808 1086 aa24.17■■□□□ 1.46
CAB39-205ENST00000484398 SPINK5Q9NQ38 1064 aaPredicted RBP24.17■■□□□ 1.46
CAB39-205ENST00000484398 MYCNP04198 464 aaPredicted RBP24.15■■□□□ 1.46
CAB39-205ENST00000484398 SAMD1Q6SPF0 538 aaPredicted RBP24.14■■□□□ 1.45
CAB39-205ENST00000484398 ZBTB22O15209 634 aa23.91■■□□□ 1.42
CAB39-205ENST00000484398 TRHP20396 242 aaPredicted RBP23.9■■□□□ 1.42
CAB39-205ENST00000484398 ZNF219Q9P2Y4 722 aaPredicted RBP23.9■■□□□ 1.42
CAB39-205ENST00000484398 DSG3P32926 999 aa23.85■■□□□ 1.41
CAB39-205ENST00000484398 ABCB7O75027 752 aa23.62■■□□□ 1.37
CAB39-205ENST00000484398 ATF5Q9Y2D1 282 aaPredicted RBP23.48■■□□□ 1.35
CAB39-205ENST00000484398 ATXN8OSP0DMR3 200 aa23.4■■□□□ 1.34
CAB39-205ENST00000484398 POLA2Q14181 598 aa23.36■■□□□ 1.33
CAB39-205ENST00000484398 EHMT2Q96KQ7 1210 aa23.34■■□□□ 1.33
CAB39-205ENST00000484398 CSRNP3Q8WYN3 585 aa23.31■■□□□ 1.32
CAB39-205ENST00000484398 ZBTB12Q9Y330 459 aaPredicted RBP22.99■■□□□ 1.27
CAB39-205ENST00000484398 RBM42Q9BTD8 480 aaKnown RBP22.82■■□□□ 1.24
CAB39-205ENST00000484398 FBLN2P98095 1184 aa22.65■■□□□ 1.22
CAB39-205ENST00000484398 OSCARQ8IYS5 282 aa22.59■■□□□ 1.21
CAB39-205ENST00000484398 MKRN4PQ13434 485 aaPredicted RBP22.43■■□□□ 1.18
CAB39-205ENST00000484398 AKT1S1Q96B36 256 aa22.38■■□□□ 1.17
CAB39-205ENST00000484398 SPDYE2BA6NHP3 402 aa22.29■■□□□ 1.16
CAB39-205ENST00000484398 SPDYE6P0CI01 402 aa22.29■■□□□ 1.16
CAB39-205ENST00000484398 SPDYE2Q495Y8 402 aa22.29■■□□□ 1.16
CAB39-205ENST00000484398 REM2Q8IYK8 340 aaPredicted RBP22.15■■□□□ 1.14
CAB39-205ENST00000484398 ZNF692Q9BU19 519 aaPredicted RBP22.11■■□□□ 1.13
CAB39-205ENST00000484398 CHRDL2Q6WN34 429 aa22.07■■□□□ 1.12
CAB39-205ENST00000484398 POTEHQ6S545 545 aa22.05■■□□□ 1.12
CAB39-205ENST00000484398 SSUH2Q9Y2M2 353 aa22■■□□□ 1.11
CAB39-205ENST00000484398 PITPNM1O00562 1244 aa21.89■■□□□ 1.09
CAB39-205ENST00000484398 PABPN1Q86U42 306 aaKnown RBP eCLIP21.79■■□□□ 1.08
CAB39-205ENST00000484398 SPDYE1Q8NFV5 336 aaPredicted RBP21.79■■□□□ 1.08
CAB39-205ENST00000484398 SPDYE4A6NLX3 237 aa21.72■■□□□ 1.07
CAB39-205ENST00000484398 CLEC11AQ9Y240 323 aa21.72■■□□□ 1.07
CAB39-205ENST00000484398 PIP4P2Q8N4L2 257 aa21.63■■□□□ 1.05
CAB39-205ENST00000484398 FXR2P51116 673 aaKnown RBP eCLIP21.59■■□□□ 1.05
CAB39-205ENST00000484398 PRR29P0C7W0 189 aa21.44■■□□□ 1.02
CAB39-205ENST00000484398 PRKAR2AP13861 404 aaKnown RBP21.36■■□□□ 1.01
CAB39-205ENST00000484398 STAG3Q9UJ98 1225 aa21.35■■□□□ 1.01
CAB39-205ENST00000484398 CHADLQ6NUI6 762 aa21.2■□□□□ 0.98
CAB39-205ENST00000484398 PROM2Q8N271 834 aa21.2■□□□□ 0.98
CAB39-205ENST00000484398 HAX1O00165 279 aa21.16■□□□□ 0.98
CAB39-205ENST00000484398 FKBP8Q14318 412 aa21.16■□□□□ 0.98
CAB39-205ENST00000484398 CREBZFQ9NS37 354 aa20.97■□□□□ 0.95
CAB39-205ENST00000484398 FARP1Q9Y4F1 1045 aaPredicted RBP20.97■□□□□ 0.95
CAB39-205ENST00000484398 SP7Q8TDD2 431 aaPredicted RBP20.92■□□□□ 0.94
CAB39-205ENST00000484398 C19orf67A6NJJ6 358 aa20.88■□□□□ 0.93
CAB39-205ENST00000484398 EVX2Q03828 476 aa20.83■□□□□ 0.93
CAB39-205ENST00000484398 CD44P16070 742 aaKnown RBP20.72■□□□□ 0.91
CAB39-205ENST00000484398 PLEKHG5O94827 1062 aa20.69■□□□□ 0.9
CAB39-205ENST00000484398 NPM1P06748 294 aaKnown RBP eCLIP20.69■□□□□ 0.9
CAB39-205ENST00000484398 MIER1Q8N108 512 aa20.68■□□□□ 0.9
CAB39-205ENST00000484398 MNX1P50219 401 aaPredicted RBP20.65■□□□□ 0.9
CAB39-205ENST00000484398 FBXO3Q9UK99 471 aa20.63■□□□□ 0.89
CAB39-205ENST00000484398 PLCD3Q8N3E9 789 aa20.6■□□□□ 0.89
CAB39-205ENST00000484398 PAK3O75914 559 aaPredicted RBP20.52■□□□□ 0.88
CAB39-205ENST00000484398 ZRANB1Q9UGI0 708 aa20.51■□□□□ 0.87
CAB39-205ENST00000484398 GABBR2O75899 941 aa20.45■□□□□ 0.86
CAB39-205ENST00000484398 ZBTB47Q9UFB7 747 aaPredicted RBP20.43■□□□□ 0.86
CAB39-205ENST00000484398 ZNF579Q8NAF0 562 aaKnown RBP20.41■□□□□ 0.86
CAB39-205ENST00000484398 CLCN6P51797 869 aa20.39■□□□□ 0.85
CAB39-205ENST00000484398 VASPP50552 380 aaPredicted RBP20.31■□□□□ 0.84
CAB39-205ENST00000484398 TSPYL2Q9H2G4 693 aaPredicted RBP20.3■□□□□ 0.84
CAB39-205ENST00000484398 PHF12Q96QT6 1004 aa20.24■□□□□ 0.83
CAB39-205ENST00000484398 RASEFQ8IZ41 740 aa20.21■□□□□ 0.83
CAB39-205ENST00000484398 KLHL34Q8N239 644 aa20.16■□□□□ 0.82
CAB39-205ENST00000484398 NUBP1P53384 320 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms