RNA–Protein interactions for RNA: ENST00000483146.1

COMMD2-204, Transcript of COMM domain containing 2, humanhuman

TSL 2

Gene COMMD2, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-204ENST00000483146 RBM33Q96EV2 1170 aaKnown RBP14.15□□□□□ -0.14
COMMD2-204ENST00000483146 ZBED2Q9BTP6 218 aa14.15□□□□□ -0.14
COMMD2-204ENST00000483146 ARIH1Q9Y4X5 557 aaPredicted RBP14.15□□□□□ -0.14
COMMD2-204ENST00000483146 SLC4A5Q9BY07 1137 aa14.13□□□□□ -0.15
COMMD2-204ENST00000483146 NBR1Q14596 966 aa14.12□□□□□ -0.15
COMMD2-204ENST00000483146 PPP1R3GB7ZBB8 358 aa14.11□□□□□ -0.15
COMMD2-204ENST00000483146 COL9A1P20849 921 aa14.11□□□□□ -0.15
COMMD2-204ENST00000483146 C6orf132Q5T0Z8 1188 aa14.1□□□□□ -0.15
COMMD2-204ENST00000483146 GRXCR2A6NFK2 248 aa14.09□□□□□ -0.15
COMMD2-204ENST00000483146 PROX2Q3B8N5 592 aa14.07□□□□□ -0.16
COMMD2-204ENST00000483146 MAP3K7O43318 606 aa14.06□□□□□ -0.16
COMMD2-204ENST00000483146 KCNV2Q8TDN2 545 aa14.06□□□□□ -0.16
COMMD2-204ENST00000483146 BHMG1C9JSJ3 638 aaPredicted RBP14.05□□□□□ -0.16
COMMD2-204ENST00000483146 EN1Q05925 392 aaPredicted RBP14.05□□□□□ -0.16
COMMD2-204ENST00000483146 KCTD12Q96CX2 325 aaKnown RBP14.05□□□□□ -0.16
COMMD2-204ENST00000483146 TSR1Q2NL82 804 aaKnown RBP14.03□□□□□ -0.16
COMMD2-204ENST00000483146 MRPL50Q8N5N7 158 aaKnown RBP14.03□□□□□ -0.16
COMMD2-204ENST00000483146 HAP1P54257 671 aaPredicted RBP14.02□□□□□ -0.17
COMMD2-204ENST00000483146 ARHGEF1Q92888 912 aaKnown RBP14.02□□□□□ -0.17
COMMD2-204ENST00000483146 GOLGA8CPA6NN73 597 aa14□□□□□ -0.17
COMMD2-204ENST00000483146 PRIM1P49642 420 aaKnown RBP14□□□□□ -0.17
COMMD2-204ENST00000483146 NBPF3Q9H094 633 aa14□□□□□ -0.17
COMMD2-204ENST00000483146 RABGEF1Q9UJ41 708 aa13.99□□□□□ -0.17
COMMD2-204ENST00000483146 HCSTQ9UBK5 93 aa13.98□□□□□ -0.17
COMMD2-204ENST00000483146 OSBPP22059 807 aa13.97□□□□□ -0.17
COMMD2-204ENST00000483146 KIAA1468Q9P260 1216 aa13.97□□□□□ -0.17
COMMD2-204ENST00000483146 P3H3Q8IVL6 736 aa13.94□□□□□ -0.18
COMMD2-204ENST00000483146 WNT2BQ93097 391 aa13.94□□□□□ -0.18
COMMD2-204ENST00000483146 TRIM6-TRIM34B2RNG4 842 aa13.93□□□□□ -0.18
COMMD2-204ENST00000483146 PTPN5P54829 565 aa13.93□□□□□ -0.18
COMMD2-204ENST00000483146 MLLT3P42568 568 aaPredicted RBP13.92□□□□□ -0.18
COMMD2-204ENST00000483146 ONECUT3O60422 494 aaPredicted RBP13.91□□□□□ -0.18
COMMD2-204ENST00000483146 CDHR5Q9HBB8 845 aa13.91□□□□□ -0.18
COMMD2-204ENST00000483146 SEPT9Q9UHD8 586 aaPredicted RBP13.9□□□□□ -0.18
COMMD2-204ENST00000483146 THSD4Q6ZMP0 1018 aa13.88□□□□□ -0.19
COMMD2-204ENST00000483146 TSKSQ9UJT2 592 aa13.88□□□□□ -0.19
COMMD2-204ENST00000483146 CDCA7LQ96GN5 454 aa13.87□□□□□ -0.19
COMMD2-204ENST00000483146 LAPTM4BQ86VI4 370 aa13.86□□□□□ -0.19
COMMD2-204ENST00000483146 CERKQ8TCT0 537 aa13.86□□□□□ -0.19
COMMD2-204ENST00000483146 PRSS12P56730 875 aa13.85□□□□□ -0.19
COMMD2-204ENST00000483146 PACS2Q86VP3 889 aa13.85□□□□□ -0.19
COMMD2-204ENST00000483146 ANKK1Q8NFD2 765 aa13.84□□□□□ -0.19
COMMD2-204ENST00000483146 ZFRQ96KR1 1074 aaKnown RBP13.83□□□□□ -0.2
COMMD2-204ENST00000483146 KDM2AQ9Y2K7 1162 aa13.83□□□□□ -0.2
COMMD2-204ENST00000483146 SEMA3EO15041 775 aa13.82□□□□□ -0.2
COMMD2-204ENST00000483146 FAM198AQ9UFP1 575 aa13.82□□□□□ -0.2
COMMD2-204ENST00000483146 PLA2G2EQ9NZK7 142 aa13.81□□□□□ -0.2
COMMD2-204ENST00000483146 BCAMP50895 628 aa13.8□□□□□ -0.2
COMMD2-204ENST00000483146 FAM98CQ17RN3 349 aaKnown RBP13.8□□□□□ -0.2
COMMD2-204ENST00000483146 SMAPO00193 183 aa13.79□□□□□ -0.2
COMMD2-204ENST00000483146 NPDC1Q9NQX5 325 aaPredicted RBP13.78□□□□□ -0.2
COMMD2-204ENST00000483146 C3orf80F5H4A9 247 aa13.76□□□□□ -0.21
COMMD2-204ENST00000483146 SOWAHBA6NEL2 793 aa13.75□□□□□ -0.21
COMMD2-204ENST00000483146 TATDN2Q93075 761 aa13.75□□□□□ -0.21
COMMD2-204ENST00000483146 PNMA3Q9UL41 463 aa13.75□□□□□ -0.21
COMMD2-204ENST00000483146 PADI6Q6TGC4 694 aa13.74□□□□□ -0.21
COMMD2-204ENST00000483146 NUTM2FA1L443 756 aa13.73□□□□□ -0.21
COMMD2-204ENST00000483146 NBPF26B4DH59 902 aa13.73□□□□□ -0.21
COMMD2-204ENST00000483146 RBM27Q9P2N5 1060 aaKnown RBP13.73□□□□□ -0.21
COMMD2-204ENST00000483146 NUDT18Q6ZVK8 323 aa13.72□□□□□ -0.21
COMMD2-204ENST00000483146 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.72□□□□□ -0.21
COMMD2-204ENST00000483146 VSIG10Q8N0Z9 540 aa13.71□□□□□ -0.21
COMMD2-204ENST00000483146 LRCH3Q96II8 777 aa13.71□□□□□ -0.21
COMMD2-204ENST00000483146 WBP1LQ9NX94 342 aa13.69□□□□□ -0.22
COMMD2-204ENST00000483146 PTGDRQ13258 359 aa13.68□□□□□ -0.22
COMMD2-204ENST00000483146 TTC13Q8NBP0 860 aa13.68□□□□□ -0.22
COMMD2-204ENST00000483146 TESPA1A2RU30 521 aaPredicted RBP13.67□□□□□ -0.22
COMMD2-204ENST00000483146 SAMD7Q7Z3H4 446 aa13.67□□□□□ -0.22
COMMD2-204ENST00000483146 HPS5Q9UPZ3 1129 aa13.67□□□□□ -0.22
COMMD2-204ENST00000483146 TSR3Q9UJK0 312 aaKnown RBP13.65□□□□□ -0.22
COMMD2-204ENST00000483146 RBM26Q5T8P6 1007 aaKnown RBP13.64□□□□□ -0.23
COMMD2-204ENST00000483146 SMYD5Q6GMV2 418 aa13.63□□□□□ -0.23
COMMD2-204ENST00000483146 HDGFP51858 240 aaKnown RBP13.61□□□□□ -0.23
COMMD2-204ENST00000483146 PPP4CP60510 307 aa13.61□□□□□ -0.23
COMMD2-204ENST00000483146 NYAP1Q6ZVC0 841 aa13.6□□□□□ -0.23
COMMD2-204ENST00000483146 RNF40O75150 1001 aa13.59□□□□□ -0.23
COMMD2-204ENST00000483146 FCHSD2O94868 740 aa13.59□□□□□ -0.23
COMMD2-204ENST00000483146 EYA1Q99502 592 aa13.57□□□□□ -0.24
COMMD2-204ENST00000483146 FAM161AQ3B820 660 aa13.56□□□□□ -0.24
COMMD2-204ENST00000483146 SWT1Q5T5J6 900 aaKnown RBP13.56□□□□□ -0.24
COMMD2-204ENST00000483146 ADGRG1Q9Y653 693 aa13.54□□□□□ -0.24
COMMD2-204ENST00000483146 IFFO2Q5TF58 517 aa13.52□□□□□ -0.25
COMMD2-204ENST00000483146 RBM46Q8TBY0 533 aaKnown RBP13.52□□□□□ -0.25
COMMD2-204ENST00000483146 HIC1Q14526 733 aa13.51□□□□□ -0.25
COMMD2-204ENST00000483146 ITGBL1O95965 494 aaPredicted RBP13.5□□□□□ -0.25
COMMD2-204ENST00000483146 SLF2Q8IX21 1173 aa13.49□□□□□ -0.25
COMMD2-204ENST00000483146 DNAJB2P25686 324 aa13.48□□□□□ -0.25
COMMD2-204ENST00000483146 FECHP22830 423 aa13.47□□□□□ -0.25
COMMD2-204ENST00000483146 KCNC4Q03721 635 aa13.47□□□□□ -0.25
COMMD2-204ENST00000483146 RCCD1A6NED2 376 aa13.46□□□□□ -0.25
COMMD2-204ENST00000483146 GNPATO15228 680 aa13.46□□□□□ -0.25
COMMD2-204ENST00000483146 SLC4A3P48751 1232 aa13.46□□□□□ -0.25
COMMD2-204ENST00000483146 GPR37O15354 613 aa13.45□□□□□ -0.26
COMMD2-204ENST00000483146 A0A0G2JS52 829 aa13.44□□□□□ -0.26
COMMD2-204ENST00000483146 APLP1P51693 650 aa13.44□□□□□ -0.26
COMMD2-204ENST00000483146 GPIHBP1Q8IV16 184 aa13.44□□□□□ -0.26
COMMD2-204ENST00000483146 TMEM134Q9H6X4 195 aa13.43□□□□□ -0.26
COMMD2-204ENST00000483146 OATP04181 439 aa13.42□□□□□ -0.26
COMMD2-204ENST00000483146 NECTIN2Q92692 538 aa13.42□□□□□ -0.26
COMMD2-204ENST00000483146 TULP1O00294 542 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms