RNA–Protein interactions for RNA: ENST00000483146.1

COMMD2-204, Transcript of COMM domain containing 2, humanhuman

TSL 2

Gene COMMD2, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-204ENST00000483146 AEBP2Q6ZN18 517 aaPredicted RBP33.51■■■□□ 2.95
COMMD2-204ENST00000483146 CHIC1Q5VXU3 224 aa32.22■■■□□ 2.75
COMMD2-204ENST00000483146 SENP3Q9H4L4 574 aaPredicted RBP28.49■■■□□ 2.15
COMMD2-204ENST00000483146 PHF23Q9BUL5 403 aaPredicted RBP28.31■■■□□ 2.12
COMMD2-204ENST00000483146 FOXD1Q16676 465 aa26.53■■□□□ 1.84
COMMD2-204ENST00000483146 PLPPR3Q6T4P5 718 aa25.95■■□□□ 1.74
COMMD2-204ENST00000483146 PPP6R1Q9UPN7 881 aa25.17■■□□□ 1.62
COMMD2-204ENST00000483146 ADRA2BP18089 450 aa25.13■■□□□ 1.61
COMMD2-204ENST00000483146 PIAS4Q8N2W9 510 aaPredicted RBP24.92■■□□□ 1.58
COMMD2-204ENST00000483146 MSH5O43196 834 aa24.63■■□□□ 1.53
COMMD2-204ENST00000483146 POTEDQ86YR6 584 aa23.33■■□□□ 1.33
COMMD2-204ENST00000483146 MAPK8IP2Q13387 824 aaPredicted RBP22.96■■□□□ 1.27
COMMD2-204ENST00000483146 SCAF1Q9H7N4 1312 aaKnown RBP22.94■■□□□ 1.26
COMMD2-204ENST00000483146 PPP4R3CPQ6ZMV5 832 aa22.83■■□□□ 1.25
COMMD2-204ENST00000483146 DMRT2Q9Y5R5 561 aa22.66■■□□□ 1.22
COMMD2-204ENST00000483146 CNKSR2Q8WXI2 1034 aa22.28■■□□□ 1.16
COMMD2-204ENST00000483146 NCBP3Q53F19 620 aaKnown RBP22.08■■□□□ 1.13
COMMD2-204ENST00000483146 HOXD11P31277 338 aaPredicted RBP21.99■■□□□ 1.11
COMMD2-204ENST00000483146 RNF216Q9NWF9 866 aaPredicted RBP21.96■■□□□ 1.11
COMMD2-204ENST00000483146 DCAF8L1A6NGE4 600 aa21.82■■□□□ 1.08
COMMD2-204ENST00000483146 NPM3O75607 178 aaKnown RBP21.76■■□□□ 1.07
COMMD2-204ENST00000483146 KCNA4P22459 653 aa21.75■■□□□ 1.07
COMMD2-204ENST00000483146 DNAJC5BQ9UF47 199 aa21.08■□□□□ 0.97
COMMD2-204ENST00000483146 RNF39Q9H2S5 420 aa21.06■□□□□ 0.96
COMMD2-204ENST00000483146 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.02■□□□□ 0.96
COMMD2-204ENST00000483146 CACNB1Q02641 598 aaPredicted RBP20.94■□□□□ 0.94
COMMD2-204ENST00000483146 C1QBPQ07021 282 aaKnown RBP20.77■□□□□ 0.92
COMMD2-204ENST00000483146 SLC4A2P04920 1241 aa20.67■□□□□ 0.9
COMMD2-204ENST00000483146 SLC4A1APQ9BWU0 796 aaKnown RBP20.62■□□□□ 0.89
COMMD2-204ENST00000483146 U3KPZ7 1027 aaPredicted RBP20.59■□□□□ 0.89
COMMD2-204ENST00000483146 SPINK5Q9NQ38 1064 aaPredicted RBP20.2■□□□□ 0.82
COMMD2-204ENST00000483146 CAPN15O75808 1086 aa20.16■□□□□ 0.82
COMMD2-204ENST00000483146 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.13■□□□□ 0.81
COMMD2-204ENST00000483146 HNRNPUL2Q1KMD3 747 aaKnown RBP20.13■□□□□ 0.81
COMMD2-204ENST00000483146 FOXD4L1Q9NU39 408 aa20.13■□□□□ 0.81
COMMD2-204ENST00000483146 MYCNP04198 464 aaPredicted RBP20.1■□□□□ 0.81
COMMD2-204ENST00000483146 APLP2Q06481 763 aa20.04■□□□□ 0.8
COMMD2-204ENST00000483146 SAMD1Q6SPF0 538 aaPredicted RBP20.04■□□□□ 0.8
COMMD2-204ENST00000483146 ZBTB22O15209 634 aa20■□□□□ 0.79
COMMD2-204ENST00000483146 TRHP20396 242 aaPredicted RBP19.96■□□□□ 0.79
COMMD2-204ENST00000483146 DSG3P32926 999 aa19.88■□□□□ 0.77
COMMD2-204ENST00000483146 ZNF219Q9P2Y4 722 aaPredicted RBP19.86■□□□□ 0.77
COMMD2-204ENST00000483146 ABCB7O75027 752 aa19.75■□□□□ 0.75
COMMD2-204ENST00000483146 ATF5Q9Y2D1 282 aaPredicted RBP19.64■□□□□ 0.73
COMMD2-204ENST00000483146 EHMT2Q96KQ7 1210 aa19.52■□□□□ 0.72
COMMD2-204ENST00000483146 POLA2Q14181 598 aa19.49■□□□□ 0.71
COMMD2-204ENST00000483146 CSRNP3Q8WYN3 585 aa19.47■□□□□ 0.71
COMMD2-204ENST00000483146 ATXN8OSP0DMR3 200 aa19.44■□□□□ 0.7
COMMD2-204ENST00000483146 ZBTB12Q9Y330 459 aaPredicted RBP19.07■□□□□ 0.64
COMMD2-204ENST00000483146 RBM42Q9BTD8 480 aaKnown RBP18.95■□□□□ 0.62
COMMD2-204ENST00000483146 OSCARQ8IYS5 282 aa18.85■□□□□ 0.61
COMMD2-204ENST00000483146 FBLN2P98095 1184 aa18.84■□□□□ 0.61
COMMD2-204ENST00000483146 MKRN4PQ13434 485 aaPredicted RBP18.74■□□□□ 0.59
COMMD2-204ENST00000483146 AKT1S1Q96B36 256 aa18.61■□□□□ 0.57
COMMD2-204ENST00000483146 SPDYE2BA6NHP3 402 aa18.53■□□□□ 0.56
COMMD2-204ENST00000483146 SPDYE6P0CI01 402 aa18.53■□□□□ 0.56
COMMD2-204ENST00000483146 SPDYE2Q495Y8 402 aa18.53■□□□□ 0.56
COMMD2-204ENST00000483146 REM2Q8IYK8 340 aaPredicted RBP18.46■□□□□ 0.55
COMMD2-204ENST00000483146 ZNF692Q9BU19 519 aaPredicted RBP18.43■□□□□ 0.54
COMMD2-204ENST00000483146 CHRDL2Q6WN34 429 aa18.39■□□□□ 0.53
COMMD2-204ENST00000483146 POTEHQ6S545 545 aa18.38■□□□□ 0.53
COMMD2-204ENST00000483146 SSUH2Q9Y2M2 353 aa18.32■□□□□ 0.52
COMMD2-204ENST00000483146 PITPNM1O00562 1244 aa18.26■□□□□ 0.51
COMMD2-204ENST00000483146 PABPN1Q86U42 306 aaKnown RBP eCLIP18.17■□□□□ 0.5
COMMD2-204ENST00000483146 CLEC11AQ9Y240 323 aa18.14■□□□□ 0.49
COMMD2-204ENST00000483146 SPDYE1Q8NFV5 336 aaPredicted RBP18.12■□□□□ 0.49
COMMD2-204ENST00000483146 SPDYE4A6NLX3 237 aa18.1■□□□□ 0.49
COMMD2-204ENST00000483146 PIP4P2Q8N4L2 257 aa18.05■□□□□ 0.48
COMMD2-204ENST00000483146 FXR2P51116 673 aaKnown RBP eCLIP17.98■□□□□ 0.47
COMMD2-204ENST00000483146 PRR29P0C7W0 189 aa17.87■□□□□ 0.45
COMMD2-204ENST00000483146 PRKAR2AP13861 404 aaKnown RBP17.81■□□□□ 0.44
COMMD2-204ENST00000483146 CHADLQ6NUI6 762 aa17.74■□□□□ 0.43
COMMD2-204ENST00000483146 STAG3Q9UJ98 1225 aa17.73■□□□□ 0.43
COMMD2-204ENST00000483146 FKBP8Q14318 412 aa17.67■□□□□ 0.42
COMMD2-204ENST00000483146 PROM2Q8N271 834 aa17.65■□□□□ 0.42
COMMD2-204ENST00000483146 HAX1O00165 279 aa17.64■□□□□ 0.41
COMMD2-204ENST00000483146 CREBZFQ9NS37 354 aa17.5■□□□□ 0.39
COMMD2-204ENST00000483146 FARP1Q9Y4F1 1045 aaPredicted RBP17.47■□□□□ 0.39
COMMD2-204ENST00000483146 EVX2Q03828 476 aa17.44■□□□□ 0.38
COMMD2-204ENST00000483146 SP7Q8TDD2 431 aaPredicted RBP17.42■□□□□ 0.38
COMMD2-204ENST00000483146 C19orf67A6NJJ6 358 aa17.39■□□□□ 0.37
COMMD2-204ENST00000483146 CD44P16070 742 aaKnown RBP17.26■□□□□ 0.35
COMMD2-204ENST00000483146 MIER1Q8N108 512 aa17.25■□□□□ 0.35
COMMD2-204ENST00000483146 MNX1P50219 401 aaPredicted RBP17.23■□□□□ 0.35
COMMD2-204ENST00000483146 NPM1P06748 294 aaKnown RBP eCLIP17.19■□□□□ 0.34
COMMD2-204ENST00000483146 PLEKHG5O94827 1062 aa17.17■□□□□ 0.34
COMMD2-204ENST00000483146 PLCD3Q8N3E9 789 aa17.16■□□□□ 0.34
COMMD2-204ENST00000483146 FBXO3Q9UK99 471 aa17.13■□□□□ 0.33
COMMD2-204ENST00000483146 ZRANB1Q9UGI0 708 aa17.11■□□□□ 0.33
COMMD2-204ENST00000483146 GABBR2O75899 941 aa17.06■□□□□ 0.32
COMMD2-204ENST00000483146 PAK3O75914 559 aaPredicted RBP17.04■□□□□ 0.32
COMMD2-204ENST00000483146 ZNF579Q8NAF0 562 aaKnown RBP16.97■□□□□ 0.31
COMMD2-204ENST00000483146 TSPYL2Q9H2G4 693 aaPredicted RBP16.95■□□□□ 0.3
COMMD2-204ENST00000483146 ZBTB47Q9UFB7 747 aaPredicted RBP16.95■□□□□ 0.3
COMMD2-204ENST00000483146 VASPP50552 380 aaPredicted RBP16.92■□□□□ 0.3
COMMD2-204ENST00000483146 PHF12Q96QT6 1004 aa16.91■□□□□ 0.3
COMMD2-204ENST00000483146 RASEFQ8IZ41 740 aa16.88■□□□□ 0.29
COMMD2-204ENST00000483146 CLCN6P51797 869 aa16.86■□□□□ 0.29
COMMD2-204ENST00000483146 NUBP1P53384 320 aa16.81■□□□□ 0.28
COMMD2-204ENST00000483146 KLHL34Q8N239 644 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms