RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 DDRGK1Q96HY6 314 aa14.68□□□□□ -0.06
RPGR-208ENST00000482855 PNISRQ8TF01 805 aaKnown RBP14.67□□□□□ -0.06
RPGR-208ENST00000482855 NUP153P49790 1475 aaKnown RBP14.67□□□□□ -0.06
RPGR-208ENST00000482855 TCOF1Q13428 1488 aaKnown RBP14.67□□□□□ -0.06
RPGR-208ENST00000482855 MIA2Q96PC5 1412 aa14.67□□□□□ -0.06
RPGR-208ENST00000482855 TMC1Q8TDI8 760 aa14.66□□□□□ -0.06
RPGR-208ENST00000482855 ATP10BO94823 1461 aa14.66□□□□□ -0.06
RPGR-208ENST00000482855 POLR3GLQ9BT43 218 aa14.65□□□□□ -0.06
RPGR-208ENST00000482855 ANKRD30BQ9BXX2 1392 aa14.65□□□□□ -0.06
RPGR-208ENST00000482855 EIF5BO60841 1220 aaKnown RBP14.64□□□□□ -0.07
RPGR-208ENST00000482855 RCAN3Q9UKA8 241 aa14.62□□□□□ -0.07
RPGR-208ENST00000482855 BCORL1Q5H9F3 1711 aa14.61□□□□□ -0.07
RPGR-208ENST00000482855 NFKBIBQ15653 356 aa14.61□□□□□ -0.07
RPGR-208ENST00000482855 LRPPRCP42704 1394 aaKnown RBP14.6□□□□□ -0.07
RPGR-208ENST00000482855 USP47Q96K76 1375 aa14.59□□□□□ -0.07
RPGR-208ENST00000482855 ARID4BQ4LE39 1312 aaPredicted RBP14.59□□□□□ -0.07
RPGR-208ENST00000482855 NEO1Q92859 1461 aa14.59□□□□□ -0.07
RPGR-208ENST00000482855 FRAT1Q92837 279 aaPredicted RBP14.59□□□□□ -0.07
RPGR-208ENST00000482855 DAXXQ9UER7 740 aaPredicted RBP14.58□□□□□ -0.08
RPGR-208ENST00000482855 ROCK2O75116 1388 aaKnown RBP14.58□□□□□ -0.08
RPGR-208ENST00000482855 BRD4O60885 1362 aaPredicted RBP14.56□□□□□ -0.08
RPGR-208ENST00000482855 KIF15Q9NS87 1388 aa14.56□□□□□ -0.08
RPGR-208ENST00000482855 SLC4A1APQ9BWU0 796 aaKnown RBP14.56□□□□□ -0.08
RPGR-208ENST00000482855 PDE3BQ13370 1112 aa14.54□□□□□ -0.08
RPGR-208ENST00000482855 MYBBP1AQ9BQG0 1328 aaKnown RBP14.54□□□□□ -0.08
RPGR-208ENST00000482855 KDM5CP41229 1560 aa14.54□□□□□ -0.08
RPGR-208ENST00000482855 RSPH6AQ9H0K4 717 aa14.54□□□□□ -0.08
RPGR-208ENST00000482855 MYO5CQ9NQX4 1742 aa14.53□□□□□ -0.08
RPGR-208ENST00000482855 KIF14Q15058 1648 aa14.53□□□□□ -0.08
RPGR-208ENST00000482855 KTN1Q86UP2 1357 aaKnown RBP14.53□□□□□ -0.08
RPGR-208ENST00000482855 TSPOAP1O95153 1857 aa14.53□□□□□ -0.08
RPGR-208ENST00000482855 MBD5Q9P267 1494 aa14.52□□□□□ -0.08
RPGR-208ENST00000482855 ZNF326Q5BKZ1 582 aaKnown RBP14.52□□□□□ -0.08
RPGR-208ENST00000482855 SLC4A3P48751 1232 aa14.52□□□□□ -0.09
RPGR-208ENST00000482855 ROCK1Q13464 1354 aa14.52□□□□□ -0.09
RPGR-208ENST00000482855 RALBP1Q15311 655 aa14.51□□□□□ -0.09
RPGR-208ENST00000482855 FAM43AQ8N2R8 423 aa14.51□□□□□ -0.09
RPGR-208ENST00000482855 ZMYM4Q5VZL5 1548 aa14.51□□□□□ -0.09
RPGR-208ENST00000482855 TRHP20396 242 aaPredicted RBP14.5□□□□□ -0.09
RPGR-208ENST00000482855 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.5□□□□□ -0.09
RPGR-208ENST00000482855 FAM69CQ0P6D2 419 aa14.49□□□□□ -0.09
RPGR-208ENST00000482855 SKAP1Q86WV1 359 aa14.49□□□□□ -0.09
RPGR-208ENST00000482855 DAPK1P53355 1430 aa14.49□□□□□ -0.09
RPGR-208ENST00000482855 PREX2Q70Z35 1606 aa14.48□□□□□ -0.09
RPGR-208ENST00000482855 CRBNQ96SW2 442 aa14.48□□□□□ -0.09
RPGR-208ENST00000482855 RICTORQ6R327 1708 aa14.48□□□□□ -0.09
RPGR-208ENST00000482855 CD109Q6YHK3 1445 aa14.48□□□□□ -0.09
RPGR-208ENST00000482855 PLIN1O60240 522 aa14.47□□□□□ -0.09
RPGR-208ENST00000482855 TROQ12816 1431 aaPredicted RBP14.47□□□□□ -0.09
RPGR-208ENST00000482855 TTC37Q6PGP7 1564 aa14.46□□□□□ -0.09
RPGR-208ENST00000482855 DNMT1P26358 1616 aaKnown RBP14.46□□□□□ -0.09
RPGR-208ENST00000482855 FRAT2O75474 233 aaPredicted RBP14.45□□□□□ -0.1
RPGR-208ENST00000482855 CDCA7LQ96GN5 454 aa14.45□□□□□ -0.1
RPGR-208ENST00000482855 FRMPD1Q5SYB0 1578 aa14.44□□□□□ -0.1
RPGR-208ENST00000482855 PZPP20742 1482 aa14.44□□□□□ -0.1
RPGR-208ENST00000482855 NLRP13Q86W25 1043 aa14.44□□□□□ -0.1
RPGR-208ENST00000482855 ABCC5O15440 1437 aa14.44□□□□□ -0.1
RPGR-208ENST00000482855 FAM161AQ3B820 660 aa14.43□□□□□ -0.1
RPGR-208ENST00000482855 E9PCH4 1651 aa14.43□□□□□ -0.1
RPGR-208ENST00000482855 REREQ9P2R6 1566 aa14.43□□□□□ -0.1
RPGR-208ENST00000482855 MAGI2Q86UL8 1455 aa14.43□□□□□ -0.1
RPGR-208ENST00000482855 RALGAPBQ86X10 1494 aa14.43□□□□□ -0.1
RPGR-208ENST00000482855 CARD11Q9BXL7 1154 aa14.43□□□□□ -0.1
RPGR-208ENST00000482855 ITSN2Q9NZM3 1697 aa14.42□□□□□ -0.1
RPGR-208ENST00000482855 DCAF11Q8TEB1 546 aa14.42□□□□□ -0.1
RPGR-208ENST00000482855 CDK13Q14004 1512 aaKnown RBP14.42□□□□□ -0.1
RPGR-208ENST00000482855 PLCH2O75038 1416 aa14.42□□□□□ -0.1
RPGR-208ENST00000482855 KIAA1107Q9UPP5 1409 aa14.42□□□□□ -0.1
RPGR-208ENST00000482855 CDC42BPAQ5VT25 1732 aa14.41□□□□□ -0.1
RPGR-208ENST00000482855 CDC42BPBQ9Y5S2 1711 aa14.41□□□□□ -0.1
RPGR-208ENST00000482855 CENPQQ7L2Z9 268 aaPredicted RBP14.41□□□□□ -0.1
RPGR-208ENST00000482855 KDM2BQ8NHM5 1336 aa14.41□□□□□ -0.1
RPGR-208ENST00000482855 UHRF1BP1Q6BDS2 1440 aa14.4□□□□□ -0.1
RPGR-208ENST00000482855 C8orf34Q49A92 452 aa14.39□□□□□ -0.11
RPGR-208ENST00000482855 ARHGEF40Q8TER5 1519 aa14.39□□□□□ -0.11
RPGR-208ENST00000482855 PARD3Q8TEW0 1356 aa14.39□□□□□ -0.11
RPGR-208ENST00000482855 ST20-MTHFSA0A0A6YYL1 179 aa14.38□□□□□ -0.11
RPGR-208ENST00000482855 PLEKHD1A6NEE1 506 aa14.37□□□□□ -0.11
RPGR-208ENST00000482855 PKD2Q13563 968 aa14.36□□□□□ -0.11
RPGR-208ENST00000482855 C20orf194Q5TEA3 1177 aa14.36□□□□□ -0.11
RPGR-208ENST00000482855 PLEKHH2Q8IVE3 1493 aa14.36□□□□□ -0.11
RPGR-208ENST00000482855 ARID3CA6NKF2 412 aa14.36□□□□□ -0.11
RPGR-208ENST00000482855 BLMP54132 1417 aaPredicted RBP14.36□□□□□ -0.11
RPGR-208ENST00000482855 ZNF644Q9H582 1327 aaPredicted RBP14.35□□□□□ -0.11
RPGR-208ENST00000482855 INSRP06213 1382 aa14.35□□□□□ -0.11
RPGR-208ENST00000482855 COL17A1Q9UMD9 1497 aaPredicted RBP14.35□□□□□ -0.11
RPGR-208ENST00000482855 GLIPR1L2Q4G1C9 344 aa14.35□□□□□ -0.11
RPGR-208ENST00000482855 ADGBQ8N7X0 1667 aa14.34□□□□□ -0.11
RPGR-208ENST00000482855 ABCC1P33527 1531 aa14.34□□□□□ -0.11
RPGR-208ENST00000482855 ARHGEF12Q9NZN5 1544 aa14.34□□□□□ -0.11
RPGR-208ENST00000482855 PKNOX2Q96KN3 472 aa14.34□□□□□ -0.11
RPGR-208ENST00000482855 FANCAO15360 1455 aa14.34□□□□□ -0.11
RPGR-208ENST00000482855 RGS3P49796 1198 aa14.32□□□□□ -0.12
RPGR-208ENST00000482855 L1TD1Q5T7N2 865 aaKnown RBP14.32□□□□□ -0.12
RPGR-208ENST00000482855 RRAGDQ9NQL2 400 aaPredicted RBP14.31□□□□□ -0.12
RPGR-208ENST00000482855 POGKQ9P215 609 aa14.31□□□□□ -0.12
RPGR-208ENST00000482855 POGZQ7Z3K3 1410 aa14.31□□□□□ -0.12
RPGR-208ENST00000482855 VIRMAQ69YN4 1812 aaKnown RBP14.31□□□□□ -0.12
RPGR-208ENST00000482855 ADAMTSL3P82987 1691 aa14.3□□□□□ -0.12
RPGR-208ENST00000482855 KDM2AQ9Y2K7 1162 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms