RNA–Protein interactions for RNA: ENST00000482673.5

CCDC66-218, Transcript of coiled-coil domain containing 66, humanhuman

TSL 4

Gene CCDC66, Length 899 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-218ENST00000482673 ZBED2Q9BTP6 218 aa12.51□□□□□ -0.41
CCDC66-218ENST00000482673 MYT1LQ9UL68 1186 aa12.51□□□□□ -0.41
CCDC66-218ENST00000482673 PPP1R3GB7ZBB8 358 aa12.5□□□□□ -0.41
CCDC66-218ENST00000482673 VPS9D1Q9Y2B5 631 aa12.5□□□□□ -0.41
CCDC66-218ENST00000482673 DDX12PQ92771 950 aa12.49□□□□□ -0.41
CCDC66-218ENST00000482673 EN1Q05925 392 aaPredicted RBP12.48□□□□□ -0.41
CCDC66-218ENST00000482673 RNF166Q96A37 237 aaPredicted RBP12.47□□□□□ -0.41
CCDC66-218ENST00000482673 BHMG1C9JSJ3 638 aaPredicted RBP12.45□□□□□ -0.42
CCDC66-218ENST00000482673 HAP1P54257 671 aaPredicted RBP12.45□□□□□ -0.42
CCDC66-218ENST00000482673 NBR1Q14596 966 aa12.45□□□□□ -0.42
CCDC66-218ENST00000482673 C6orf132Q5T0Z8 1188 aa12.45□□□□□ -0.42
CCDC66-218ENST00000482673 COL9A1P20849 921 aa12.44□□□□□ -0.42
CCDC66-218ENST00000482673 ONECUT3O60422 494 aaPredicted RBP12.42□□□□□ -0.42
CCDC66-218ENST00000482673 OSBPP22059 807 aa12.42□□□□□ -0.42
CCDC66-218ENST00000482673 PRIM1P49642 420 aaKnown RBP12.41□□□□□ -0.42
CCDC66-218ENST00000482673 KDM2AQ9Y2K7 1162 aa12.41□□□□□ -0.42
CCDC66-218ENST00000482673 VSIG10Q8N0Z9 540 aa12.4□□□□□ -0.42
CCDC66-218ENST00000482673 MAP3K7O43318 606 aa12.37□□□□□ -0.43
CCDC66-218ENST00000482673 RBM33Q96EV2 1170 aaKnown RBP12.37□□□□□ -0.43
CCDC66-218ENST00000482673 RABGEF1Q9UJ41 708 aa12.37□□□□□ -0.43
CCDC66-218ENST00000482673 GRXCR2A6NFK2 248 aa12.36□□□□□ -0.43
CCDC66-218ENST00000482673 TSR1Q2NL82 804 aaKnown RBP12.36□□□□□ -0.43
CCDC66-218ENST00000482673 CERKQ8TCT0 537 aa12.35□□□□□ -0.43
CCDC66-218ENST00000482673 PROX2Q3B8N5 592 aa12.34□□□□□ -0.43
CCDC66-218ENST00000482673 MLLT3P42568 568 aaPredicted RBP12.33□□□□□ -0.44
CCDC66-218ENST00000482673 NBPF3Q9H094 633 aa12.33□□□□□ -0.44
CCDC66-218ENST00000482673 TRIM6-TRIM34B2RNG4 842 aa12.32□□□□□ -0.44
CCDC66-218ENST00000482673 RBM27Q9P2N5 1060 aaKnown RBP12.32□□□□□ -0.44
CCDC66-218ENST00000482673 LAPTM4BQ86VI4 370 aa12.3□□□□□ -0.44
CCDC66-218ENST00000482673 TESPA1A2RU30 521 aaPredicted RBP12.28□□□□□ -0.44
CCDC66-218ENST00000482673 MRPL50Q8N5N7 158 aaKnown RBP12.28□□□□□ -0.44
CCDC66-218ENST00000482673 SEMA3EO15041 775 aa12.27□□□□□ -0.45
CCDC66-218ENST00000482673 STAC3Q96MF2 364 aa12.27□□□□□ -0.45
CCDC66-218ENST00000482673 CDHR5Q9HBB8 845 aa12.27□□□□□ -0.45
CCDC66-218ENST00000482673 NPDC1Q9NQX5 325 aaPredicted RBP12.27□□□□□ -0.45
CCDC66-218ENST00000482673 PRSS12P56730 875 aa12.26□□□□□ -0.45
CCDC66-218ENST00000482673 KIAA1468Q9P260 1216 aa12.26□□□□□ -0.45
CCDC66-218ENST00000482673 TSKSQ9UJT2 592 aa12.26□□□□□ -0.45
CCDC66-218ENST00000482673 TTC13Q8NBP0 860 aa12.25□□□□□ -0.45
CCDC66-218ENST00000482673 CDCA7LQ96GN5 454 aa12.25□□□□□ -0.45
CCDC66-218ENST00000482673 HCSTQ9UBK5 93 aa12.25□□□□□ -0.45
CCDC66-218ENST00000482673 FAM198AQ9UFP1 575 aa12.22□□□□□ -0.45
CCDC66-218ENST00000482673 THSD4Q6ZMP0 1018 aa12.21□□□□□ -0.45
CCDC66-218ENST00000482673 PACS2Q86VP3 889 aa12.21□□□□□ -0.45
CCDC66-218ENST00000482673 KCTD12Q96CX2 325 aaKnown RBP12.21□□□□□ -0.45
CCDC66-218ENST00000482673 FAM98CQ17RN3 349 aaKnown RBP12.2□□□□□ -0.46
CCDC66-218ENST00000482673 PTGDRQ13258 359 aa12.19□□□□□ -0.46
CCDC66-218ENST00000482673 WNT2BQ93097 391 aa12.19□□□□□ -0.46
CCDC66-218ENST00000482673 ZFRQ96KR1 1074 aaKnown RBP12.17□□□□□ -0.46
CCDC66-218ENST00000482673 GOLGA8CPA6NN73 597 aa12.16□□□□□ -0.46
CCDC66-218ENST00000482673 NBPF26B4DH59 902 aa12.16□□□□□ -0.46
CCDC66-218ENST00000482673 SMYD5Q6GMV2 418 aa12.16□□□□□ -0.46
CCDC66-218ENST00000482673 ANKK1Q8NFD2 765 aa12.15□□□□□ -0.46
CCDC66-218ENST00000482673 SEPT9Q9UHD8 586 aaPredicted RBP12.15□□□□□ -0.46
CCDC66-218ENST00000482673 SOWAHBA6NEL2 793 aa12.14□□□□□ -0.47
CCDC66-218ENST00000482673 C3orf80F5H4A9 247 aa12.13□□□□□ -0.47
CCDC66-218ENST00000482673 PADI6Q6TGC4 694 aa12.13□□□□□ -0.47
CCDC66-218ENST00000482673 TATDN2Q93075 761 aa12.12□□□□□ -0.47
CCDC66-218ENST00000482673 GPR37O15354 613 aa12.09□□□□□ -0.47
CCDC66-218ENST00000482673 FCHSD2O94868 740 aa12.09□□□□□ -0.47
CCDC66-218ENST00000482673 NYAP1Q6ZVC0 841 aa12.08□□□□□ -0.48
CCDC66-218ENST00000482673 PNMA3Q9UL41 463 aa12.08□□□□□ -0.48
CCDC66-218ENST00000482673 NUTM2FA1L443 756 aa12.07□□□□□ -0.48
CCDC66-218ENST00000482673 RBM26Q5T8P6 1007 aaKnown RBP12.07□□□□□ -0.48
CCDC66-218ENST00000482673 NUDT18Q6ZVK8 323 aa12.07□□□□□ -0.48
CCDC66-218ENST00000482673 EYA1Q99502 592 aa12.07□□□□□ -0.48
CCDC66-218ENST00000482673 BCAMP50895 628 aa12.06□□□□□ -0.48
CCDC66-218ENST00000482673 HIC1Q14526 733 aa12.06□□□□□ -0.48
CCDC66-218ENST00000482673 PTPN5P54829 565 aa12.05□□□□□ -0.48
CCDC66-218ENST00000482673 LRCH3Q96II8 777 aa12.05□□□□□ -0.48
CCDC66-218ENST00000482673 SMAPO00193 183 aa12.04□□□□□ -0.48
CCDC66-218ENST00000482673 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.04□□□□□ -0.48
CCDC66-218ENST00000482673 IFFO2Q5TF58 517 aa12.03□□□□□ -0.48
CCDC66-218ENST00000482673 ADGRG1Q9Y653 693 aa12.03□□□□□ -0.48
CCDC66-218ENST00000482673 TSR3Q9UJK0 312 aaKnown RBP12.02□□□□□ -0.49
CCDC66-218ENST00000482673 SAMD7Q7Z3H4 446 aa12□□□□□ -0.49
CCDC66-218ENST00000482673 WBP1LQ9NX94 342 aa11.99□□□□□ -0.49
CCDC66-218ENST00000482673 PLA2G2EQ9NZK7 142 aa11.99□□□□□ -0.49
CCDC66-218ENST00000482673 GNPATO15228 680 aa11.98□□□□□ -0.49
CCDC66-218ENST00000482673 ITGBL1O95965 494 aaPredicted RBP11.97□□□□□ -0.49
CCDC66-218ENST00000482673 RBM46Q8TBY0 533 aaKnown RBP11.97□□□□□ -0.49
CCDC66-218ENST00000482673 HPS5Q9UPZ3 1129 aa11.97□□□□□ -0.49
CCDC66-218ENST00000482673 GPIHBP1Q8IV16 184 aa11.96□□□□□ -0.49
CCDC66-218ENST00000482673 TULP1O00294 542 aaPredicted RBP11.95□□□□□ -0.5
CCDC66-218ENST00000482673 DNAJB2P25686 324 aa11.94□□□□□ -0.5
CCDC66-218ENST00000482673 PXYLP1Q8TE99 480 aa11.94□□□□□ -0.5
CCDC66-218ENST00000482673 NECTIN2Q92692 538 aa11.94□□□□□ -0.5
CCDC66-218ENST00000482673 TMEM134Q9H6X4 195 aa11.94□□□□□ -0.5
CCDC66-218ENST00000482673 OATP04181 439 aa11.93□□□□□ -0.5
CCDC66-218ENST00000482673 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.92□□□□□ -0.5
CCDC66-218ENST00000482673 FECHP22830 423 aa11.92□□□□□ -0.5
CCDC66-218ENST00000482673 HDGFP51858 240 aaKnown RBP11.92□□□□□ -0.5
CCDC66-218ENST00000482673 SWT1Q5T5J6 900 aaKnown RBP11.92□□□□□ -0.5
CCDC66-218ENST00000482673 SLF2Q8IX21 1173 aa11.92□□□□□ -0.5
CCDC66-218ENST00000482673 PPP4CP60510 307 aa11.91□□□□□ -0.5
CCDC66-218ENST00000482673 METTL3Q86U44 580 aaKnown RBP11.91□□□□□ -0.5
CCDC66-218ENST00000482673 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.9□□□□□ -0.5
CCDC66-218ENST00000482673 RCCD1A6NED2 376 aa11.89□□□□□ -0.51
CCDC66-218ENST00000482673 FAM161AQ3B820 660 aa11.88□□□□□ -0.51
CCDC66-218ENST00000482673 SLC4A3P48751 1232 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms