RNA–Protein interactions for RNA: ENST00000482673.5

CCDC66-218, Transcript of coiled-coil domain containing 66, humanhuman

TSL 4

Gene CCDC66, Length 899 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-218ENST00000482673 AEBP2Q6ZN18 517 aaPredicted RBP29.47■■■□□ 2.31
CCDC66-218ENST00000482673 CHIC1Q5VXU3 224 aa28.49■■■□□ 2.15
CCDC66-218ENST00000482673 SENP3Q9H4L4 574 aaPredicted RBP25.09■■□□□ 1.61
CCDC66-218ENST00000482673 PHF23Q9BUL5 403 aaPredicted RBP24.99■■□□□ 1.59
CCDC66-218ENST00000482673 FOXD1Q16676 465 aa23.28■■□□□ 1.32
CCDC66-218ENST00000482673 PLPPR3Q6T4P5 718 aa22.97■■□□□ 1.27
CCDC66-218ENST00000482673 PPP6R1Q9UPN7 881 aa22.11■■□□□ 1.13
CCDC66-218ENST00000482673 ADRA2BP18089 450 aa22.02■■□□□ 1.12
CCDC66-218ENST00000482673 PIAS4Q8N2W9 510 aaPredicted RBP21.82■■□□□ 1.08
CCDC66-218ENST00000482673 MSH5O43196 834 aa21.65■■□□□ 1.06
CCDC66-218ENST00000482673 POTEDQ86YR6 584 aa20.25■□□□□ 0.83
CCDC66-218ENST00000482673 SCAF1Q9H7N4 1312 aaKnown RBP20.23■□□□□ 0.83
CCDC66-218ENST00000482673 PPP4R3CPQ6ZMV5 832 aa20.14■□□□□ 0.81
CCDC66-218ENST00000482673 MAPK8IP2Q13387 824 aaPredicted RBP20.06■□□□□ 0.8
CCDC66-218ENST00000482673 DMRT2Q9Y5R5 561 aa19.99■□□□□ 0.79
CCDC66-218ENST00000482673 CNKSR2Q8WXI2 1034 aa19.71■□□□□ 0.75
CCDC66-218ENST00000482673 NCBP3Q53F19 620 aaKnown RBP19.53■□□□□ 0.72
CCDC66-218ENST00000482673 HOXD11P31277 338 aaPredicted RBP19.48■□□□□ 0.71
CCDC66-218ENST00000482673 RNF216Q9NWF9 866 aaPredicted RBP19.44■□□□□ 0.7
CCDC66-218ENST00000482673 KCNA4P22459 653 aa19.28■□□□□ 0.68
CCDC66-218ENST00000482673 NPM3O75607 178 aaKnown RBP19.26■□□□□ 0.67
CCDC66-218ENST00000482673 DNAJC5BQ9UF47 199 aa19.02■□□□□ 0.64
CCDC66-218ENST00000482673 DCAF8L1A6NGE4 600 aa18.89■□□□□ 0.61
CCDC66-218ENST00000482673 RNF39Q9H2S5 420 aa18.53■□□□□ 0.56
CCDC66-218ENST00000482673 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.39■□□□□ 0.53
CCDC66-218ENST00000482673 SLC4A2P04920 1241 aa18.29■□□□□ 0.52
CCDC66-218ENST00000482673 C1QBPQ07021 282 aaKnown RBP18.29■□□□□ 0.52
CCDC66-218ENST00000482673 SLC4A1APQ9BWU0 796 aaKnown RBP18.28■□□□□ 0.52
CCDC66-218ENST00000482673 CACNB1Q02641 598 aaPredicted RBP18.15■□□□□ 0.5
CCDC66-218ENST00000482673 U3KPZ7 1027 aaPredicted RBP18.15■□□□□ 0.5
CCDC66-218ENST00000482673 FOXD4L1Q9NU39 408 aa17.89■□□□□ 0.45
CCDC66-218ENST00000482673 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.84■□□□□ 0.45
CCDC66-218ENST00000482673 HNRNPUL2Q1KMD3 747 aaKnown RBP17.84■□□□□ 0.45
CCDC66-218ENST00000482673 MYCNP04198 464 aaPredicted RBP17.82■□□□□ 0.44
CCDC66-218ENST00000482673 ZBTB22O15209 634 aa17.77■□□□□ 0.44
CCDC66-218ENST00000482673 SAMD1Q6SPF0 538 aaPredicted RBP17.75■□□□□ 0.43
CCDC66-218ENST00000482673 APLP2Q06481 763 aa17.72■□□□□ 0.43
CCDC66-218ENST00000482673 SPINK5Q9NQ38 1064 aaPredicted RBP17.67■□□□□ 0.42
CCDC66-218ENST00000482673 CAPN15O75808 1086 aa17.57■□□□□ 0.4
CCDC66-218ENST00000482673 ZNF219Q9P2Y4 722 aaPredicted RBP17.52■□□□□ 0.4
CCDC66-218ENST00000482673 DSG3P32926 999 aa17.49■□□□□ 0.39
CCDC66-218ENST00000482673 ATXN8OSP0DMR3 200 aa17.38■□□□□ 0.37
CCDC66-218ENST00000482673 TRHP20396 242 aaPredicted RBP17.38■□□□□ 0.37
CCDC66-218ENST00000482673 CSRNP3Q8WYN3 585 aa17.38■□□□□ 0.37
CCDC66-218ENST00000482673 ATF5Q9Y2D1 282 aaPredicted RBP17.31■□□□□ 0.36
CCDC66-218ENST00000482673 EHMT2Q96KQ7 1210 aa17.26■□□□□ 0.35
CCDC66-218ENST00000482673 ABCB7O75027 752 aa17.18■□□□□ 0.34
CCDC66-218ENST00000482673 POLA2Q14181 598 aa17.09■□□□□ 0.33
CCDC66-218ENST00000482673 ZBTB12Q9Y330 459 aaPredicted RBP16.9■□□□□ 0.3
CCDC66-218ENST00000482673 RBM42Q9BTD8 480 aaKnown RBP16.68■□□□□ 0.26
CCDC66-218ENST00000482673 FBLN2P98095 1184 aa16.6■□□□□ 0.25
CCDC66-218ENST00000482673 MKRN4PQ13434 485 aaPredicted RBP16.59■□□□□ 0.25
CCDC66-218ENST00000482673 OSCARQ8IYS5 282 aa16.54■□□□□ 0.24
CCDC66-218ENST00000482673 AKT1S1Q96B36 256 aa16.41■□□□□ 0.22
CCDC66-218ENST00000482673 SPDYE2BA6NHP3 402 aa16.4■□□□□ 0.22
CCDC66-218ENST00000482673 SPDYE6P0CI01 402 aa16.4■□□□□ 0.22
CCDC66-218ENST00000482673 SPDYE2Q495Y8 402 aa16.4■□□□□ 0.22
CCDC66-218ENST00000482673 SSUH2Q9Y2M2 353 aa16.28■□□□□ 0.2
CCDC66-218ENST00000482673 REM2Q8IYK8 340 aaPredicted RBP16.21■□□□□ 0.19
CCDC66-218ENST00000482673 ZNF692Q9BU19 519 aaPredicted RBP16.18■□□□□ 0.18
CCDC66-218ENST00000482673 CHRDL2Q6WN34 429 aa16.08■□□□□ 0.16
CCDC66-218ENST00000482673 PITPNM1O00562 1244 aa16.02■□□□□ 0.16
CCDC66-218ENST00000482673 SPDYE4A6NLX3 237 aa16■□□□□ 0.15
CCDC66-218ENST00000482673 PABPN1Q86U42 306 aaKnown RBP eCLIP15.96■□□□□ 0.15
CCDC66-218ENST00000482673 SPDYE1Q8NFV5 336 aaPredicted RBP15.96■□□□□ 0.15
CCDC66-218ENST00000482673 POTEHQ6S545 545 aa15.95■□□□□ 0.14
CCDC66-218ENST00000482673 PROM2Q8N271 834 aa15.88■□□□□ 0.13
CCDC66-218ENST00000482673 FXR2P51116 673 aaKnown RBP eCLIP15.85■□□□□ 0.13
CCDC66-218ENST00000482673 PIP4P2Q8N4L2 257 aa15.81■□□□□ 0.12
CCDC66-218ENST00000482673 CLEC11AQ9Y240 323 aa15.76■□□□□ 0.11
CCDC66-218ENST00000482673 STAG3Q9UJ98 1225 aa15.7■□□□□ 0.1
CCDC66-218ENST00000482673 PRR29P0C7W0 189 aa15.65■□□□□ 0.1
CCDC66-218ENST00000482673 FKBP8Q14318 412 aa15.65■□□□□ 0.1
CCDC66-218ENST00000482673 PRKAR2AP13861 404 aaKnown RBP15.57■□□□□ 0.08
CCDC66-218ENST00000482673 CREBZFQ9NS37 354 aa15.45■□□□□ 0.06
CCDC66-218ENST00000482673 CHADLQ6NUI6 762 aa15.44■□□□□ 0.06
CCDC66-218ENST00000482673 FARP1Q9Y4F1 1045 aaPredicted RBP15.36■□□□□ 0.05
CCDC66-218ENST00000482673 C19orf67A6NJJ6 358 aa15.31■□□□□ 0.04
CCDC66-218ENST00000482673 MNX1P50219 401 aaPredicted RBP15.31■□□□□ 0.04
CCDC66-218ENST00000482673 HAX1O00165 279 aa15.29■□□□□ 0.04
CCDC66-218ENST00000482673 FBXO3Q9UK99 471 aa15.27■□□□□ 0.04
CCDC66-218ENST00000482673 SP7Q8TDD2 431 aaPredicted RBP15.21■□□□□ 0.03
CCDC66-218ENST00000482673 EVX2Q03828 476 aa15.2■□□□□ 0.02
CCDC66-218ENST00000482673 NPM1P06748 294 aaKnown RBP eCLIP15.15■□□□□ 0.02
CCDC66-218ENST00000482673 MIER1Q8N108 512 aa15.13■□□□□ 0.01
CCDC66-218ENST00000482673 PLEKHG5O94827 1062 aa15.12■□□□□ 0.01
CCDC66-218ENST00000482673 CD44P16070 742 aaKnown RBP15.11■□□□□ 0.01
CCDC66-218ENST00000482673 PLCD3Q8N3E9 789 aa15.07■□□□□ 0
CCDC66-218ENST00000482673 VASPP50552 380 aaPredicted RBP15.06■□□□□ 0
CCDC66-218ENST00000482673 ZBTB47Q9UFB7 747 aaPredicted RBP15.05■□□□□ -0
CCDC66-218ENST00000482673 ZNF579Q8NAF0 562 aaKnown RBP15.01□□□□□ -0.01
CCDC66-218ENST00000482673 CLCN6P51797 869 aa14.99□□□□□ -0.01
CCDC66-218ENST00000482673 ZRANB1Q9UGI0 708 aa14.95□□□□□ -0.02
CCDC66-218ENST00000482673 PAK3O75914 559 aaPredicted RBP14.94□□□□□ -0.02
CCDC66-218ENST00000482673 NUBP1P53384 320 aa14.92□□□□□ -0.02
CCDC66-218ENST00000482673 GABBR2O75899 941 aa14.9□□□□□ -0.02
CCDC66-218ENST00000482673 RASEFQ8IZ41 740 aa14.88□□□□□ -0.03
CCDC66-218ENST00000482673 CCDC61Q9Y6R9 512 aa14.86□□□□□ -0.03
CCDC66-218ENST00000482673 IFNLR1Q8IU57 520 aaPredicted RBP14.83□□□□□ -0.04
CCDC66-218ENST00000482673 TSPYL2Q9H2G4 693 aaPredicted RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms