RNA–Protein interactions for RNA: ENST00000482000.1

PRKCB-206, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-206ENST00000482000 FBXW7Q969H0 707 aa9.6□□□□□ -0.87
PRKCB-206ENST00000482000 NUTM2FA1L443 756 aa9.59□□□□□ -0.87
PRKCB-206ENST00000482000 ZNF454Q8N9F8 522 aa9.59□□□□□ -0.87
PRKCB-206ENST00000482000 HMGXB3Q12766 1538 aa9.59□□□□□ -0.87
PRKCB-206ENST00000482000 SMARCA2P51531 1590 aa9.58□□□□□ -0.88
PRKCB-206ENST00000482000 ST18O60284 1047 aa9.58□□□□□ -0.88
PRKCB-206ENST00000482000 BARGINQ6ZT62 677 aa9.58□□□□□ -0.88
PRKCB-206ENST00000482000 ZDHHC16Q969W1 377 aa9.58□□□□□ -0.88
PRKCB-206ENST00000482000 PSDA5PKW4 1024 aaPredicted RBP9.57□□□□□ -0.88
PRKCB-206ENST00000482000 RBM33Q96EV2 1170 aaKnown RBP9.57□□□□□ -0.88
PRKCB-206ENST00000482000 BAZ1AQ9NRL2 1556 aaPredicted RBP9.57□□□□□ -0.88
PRKCB-206ENST00000482000 PEG3Q9GZU2 1588 aa9.56□□□□□ -0.88
PRKCB-206ENST00000482000 MAP3K7O43318 606 aa9.56□□□□□ -0.88
PRKCB-206ENST00000482000 PTGDRQ13258 359 aa9.55□□□□□ -0.88
PRKCB-206ENST00000482000 TSR1Q2NL82 804 aaKnown RBP9.55□□□□□ -0.88
PRKCB-206ENST00000482000 ADAM33Q9BZ11 813 aa9.55□□□□□ -0.88
PRKCB-206ENST00000482000 NPDC1Q9NQX5 325 aaPredicted RBP9.55□□□□□ -0.88
PRKCB-206ENST00000482000 FCHSD2O94868 740 aa9.54□□□□□ -0.88
PRKCB-206ENST00000482000 PPP4R3BQ5MIZ7 849 aa9.54□□□□□ -0.88
PRKCB-206ENST00000482000 C6orf132Q5T0Z8 1188 aa9.54□□□□□ -0.88
PRKCB-206ENST00000482000 CDHR5Q9HBB8 845 aa9.54□□□□□ -0.88
PRKCB-206ENST00000482000 FAM163AQ96GL9 167 aaPredicted RBP9.53□□□□□ -0.88
PRKCB-206ENST00000482000 HIC1Q14526 733 aa9.52□□□□□ -0.89
PRKCB-206ENST00000482000 MROH2BQ7Z745 1585 aa9.52□□□□□ -0.89
PRKCB-206ENST00000482000 SLC24A3Q9HC58 644 aa9.52□□□□□ -0.89
PRKCB-206ENST00000482000 GNPATO15228 680 aa9.51□□□□□ -0.89
PRKCB-206ENST00000482000 BCL2L12Q9HB09 334 aa9.51□□□□□ -0.89
PRKCB-206ENST00000482000 BAZ1BQ9UIG0 1483 aaKnown RBP9.51□□□□□ -0.89
PRKCB-206ENST00000482000 LCE2DQ5TA82 110 aaPredicted RBP9.5□□□□□ -0.89
PRKCB-206ENST00000482000 FECHP22830 423 aa9.49□□□□□ -0.89
PRKCB-206ENST00000482000 MARVELD3Q96A59 401 aa9.49□□□□□ -0.89
PRKCB-206ENST00000482000 ERBB3P21860 1342 aa9.49□□□□□ -0.89
PRKCB-206ENST00000482000 NESP48681 1621 aa9.49□□□□□ -0.89
PRKCB-206ENST00000482000 KRI1Q8N9T8 703 aaKnown RBP9.48□□□□□ -0.89
PRKCB-206ENST00000482000 CERKQ8TCT0 537 aa9.48□□□□□ -0.89
PRKCB-206ENST00000482000 CUX2O14529 1486 aa9.47□□□□□ -0.89
PRKCB-206ENST00000482000 ERCC6Q03468 1493 aa9.47□□□□□ -0.89
PRKCB-206ENST00000482000 EMP3P54852 163 aa9.47□□□□□ -0.89
PRKCB-206ENST00000482000 VARS2Q5ST30 1063 aaKnown RBP9.47□□□□□ -0.89
PRKCB-206ENST00000482000 MINK1Q8N4C8 1332 aaPredicted RBP9.47□□□□□ -0.89
PRKCB-206ENST00000482000 PTPREP23469 700 aa9.46□□□□□ -0.9
PRKCB-206ENST00000482000 MAP2K5Q13163 448 aa9.46□□□□□ -0.9
PRKCB-206ENST00000482000 IRF6O14896 467 aa9.45□□□□□ -0.9
PRKCB-206ENST00000482000 COL9A1P20849 921 aa9.45□□□□□ -0.9
PRKCB-206ENST00000482000 AK7Q96M32 723 aa9.45□□□□□ -0.9
PRKCB-206ENST00000482000 FAM205CA6NFA0 338 aa9.44□□□□□ -0.9
PRKCB-206ENST00000482000 WIZO95785 1651 aa9.43□□□□□ -0.9
PRKCB-206ENST00000482000 LAMC3Q9Y6N6 1575 aa9.43□□□□□ -0.9
PRKCB-206ENST00000482000 POTEB3A0JP26 581 aa9.43□□□□□ -0.9
PRKCB-206ENST00000482000 POTEBQ6S5H4 581 aa9.43□□□□□ -0.9
PRKCB-206ENST00000482000 POTEEQ6S8J3 1075 aa9.43□□□□□ -0.9
PRKCB-206ENST00000482000 TTC13Q8NBP0 860 aa9.43□□□□□ -0.9
PRKCB-206ENST00000482000 RBM27Q9P2N5 1060 aaKnown RBP9.43□□□□□ -0.9
PRKCB-206ENST00000482000 PPP1R3GB7ZBB8 358 aa9.42□□□□□ -0.9
PRKCB-206ENST00000482000 PRSS12P56730 875 aa9.42□□□□□ -0.9
PRKCB-206ENST00000482000 ZNF687Q8N1G0 1237 aa9.42□□□□□ -0.9
PRKCB-206ENST00000482000 KIF21AQ7Z4S6 1674 aa9.42□□□□□ -0.9
PRKCB-206ENST00000482000 THOC2Q8NI27 1593 aaKnown RBP9.41□□□□□ -0.9
PRKCB-206ENST00000482000 TRIM66O15016 1216 aa9.41□□□□□ -0.9
PRKCB-206ENST00000482000 PADI6Q6TGC4 694 aa9.41□□□□□ -0.9
PRKCB-206ENST00000482000 CDCA7LQ96GN5 454 aa9.41□□□□□ -0.9
PRKCB-206ENST00000482000 HS3ST6Q96QI5 342 aa9.41□□□□□ -0.9
PRKCB-206ENST00000482000 ARHGAP33O14559 1287 aa9.4□□□□□ -0.9
PRKCB-206ENST00000482000 CCDC102AQ96A19 550 aa9.4□□□□□ -0.9
PRKCB-206ENST00000482000 KCNK17Q96T54 332 aa9.4□□□□□ -0.9
PRKCB-206ENST00000482000 PSEN2P49810 448 aa9.38□□□□□ -0.91
PRKCB-206ENST00000482000 FAM198AQ9UFP1 575 aa9.38□□□□□ -0.91
PRKCB-206ENST00000482000 PBX2P40425 430 aa9.37□□□□□ -0.91
PRKCB-206ENST00000482000 KCNH8Q96L42 1107 aa9.37□□□□□ -0.91
PRKCB-206ENST00000482000 TSKSQ9UJT2 592 aa9.37□□□□□ -0.91
PRKCB-206ENST00000482000 ONECUT3O60422 494 aaPredicted RBP9.36□□□□□ -0.91
PRKCB-206ENST00000482000 BRPF1P55201 1214 aaPredicted RBP9.36□□□□□ -0.91
PRKCB-206ENST00000482000 ZBED2Q9BTP6 218 aa9.36□□□□□ -0.91
PRKCB-206ENST00000482000 AXIN2Q9Y2T1 843 aa9.36□□□□□ -0.91
PRKCB-206ENST00000482000 ADGRG1Q9Y653 693 aa9.36□□□□□ -0.91
PRKCB-206ENST00000482000 TRIM6-TRIM34B2RNG4 842 aa9.35□□□□□ -0.91
PRKCB-206ENST00000482000 PDE4DQ08499 809 aa9.35□□□□□ -0.91
PRKCB-206ENST00000482000 FAM161AQ3B820 660 aa9.35□□□□□ -0.91
PRKCB-206ENST00000482000 DMRTA1Q5VZB9 504 aa9.35□□□□□ -0.91
PRKCB-206ENST00000482000 SLC4A5Q9BY07 1137 aa9.35□□□□□ -0.91
PRKCB-206ENST00000482000 OATP04181 439 aa9.34□□□□□ -0.91
PRKCB-206ENST00000482000 AMHR2Q16671 573 aa9.34□□□□□ -0.91
PRKCB-206ENST00000482000 PROX2Q3B8N5 592 aa9.34□□□□□ -0.91
PRKCB-206ENST00000482000 PHOX2BQ99453 314 aa9.33□□□□□ -0.92
PRKCB-206ENST00000482000 METTL3Q86U44 580 aaKnown RBP9.32□□□□□ -0.92
PRKCB-206ENST00000482000 PXYLP1Q8TE99 480 aa9.32□□□□□ -0.92
PRKCB-206ENST00000482000 RSF1Q96T23 1441 aaPredicted RBP9.31□□□□□ -0.92
PRKCB-206ENST00000482000 PDS5BQ9NTI5 1447 aa9.31□□□□□ -0.92
PRKCB-206ENST00000482000 C3orf80F5H4A9 247 aa9.31□□□□□ -0.92
PRKCB-206ENST00000482000 NEUROD2Q15784 382 aa9.31□□□□□ -0.92
PRKCB-206ENST00000482000 PACS2Q86VP3 889 aa9.31□□□□□ -0.92
PRKCB-206ENST00000482000 EYA1Q99502 592 aa9.31□□□□□ -0.92
PRKCB-206ENST00000482000 CADPSQ9ULU8 1353 aa9.31□□□□□ -0.92
PRKCB-206ENST00000482000 TATDN2Q93075 761 aa9.3□□□□□ -0.92
PRKCB-206ENST00000482000 KIAA1468Q9P260 1216 aa9.3□□□□□ -0.92
PRKCB-206ENST00000482000 NUDT18Q6ZVK8 323 aa9.29□□□□□ -0.92
PRKCB-206ENST00000482000 RBM46Q8TBY0 533 aaKnown RBP9.29□□□□□ -0.92
PRKCB-206ENST00000482000 RABGEF1Q9UJ41 708 aa9.29□□□□□ -0.92
PRKCB-206ENST00000482000 VPS9D1Q9Y2B5 631 aa9.29□□□□□ -0.92
PRKCB-206ENST00000482000 TOP2AP11388 1531 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms