RNA–Protein interactions for RNA: ENST00000481879.1

KDM1A-204, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-204ENST00000481879 ZNF787Q6DD87 383 aa8.05□□□□□ -1.12
KDM1A-204ENST00000481879 MRPL50Q8N5N7 158 aaKnown RBP8.05□□□□□ -1.12
KDM1A-204ENST00000481879 PCDHGA10Q9Y5H3 936 aa8.05□□□□□ -1.12
KDM1A-204ENST00000481879 BBXQ8WY36 941 aaPredicted RBP8.04□□□□□ -1.12
KDM1A-204ENST00000481879 PHF14O94880 888 aa8.03□□□□□ -1.12
KDM1A-204ENST00000481879 PPP1R3GB7ZBB8 358 aa8.02□□□□□ -1.13
KDM1A-204ENST00000481879 CAMK2BQ13554 666 aa8.02□□□□□ -1.13
KDM1A-204ENST00000481879 TYW1BQ6NUM6 668 aa8.02□□□□□ -1.13
KDM1A-204ENST00000481879 FBXW7Q969H0 707 aa8.02□□□□□ -1.13
KDM1A-204ENST00000481879 NBPF3Q9H094 633 aa8.02□□□□□ -1.13
KDM1A-204ENST00000481879 COL9A1P20849 921 aa8□□□□□ -1.13
KDM1A-204ENST00000481879 NRG2O14511 850 aaPredicted RBP7.99□□□□□ -1.13
KDM1A-204ENST00000481879 DPYSL4O14531 572 aa7.99□□□□□ -1.13
KDM1A-204ENST00000481879 RABGEF1Q9UJ41 708 aa7.99□□□□□ -1.13
KDM1A-204ENST00000481879 PROX2Q3B8N5 592 aa7.98□□□□□ -1.13
KDM1A-204ENST00000481879 EPAS1Q99814 870 aa7.98□□□□□ -1.13
KDM1A-204ENST00000481879 KCNC4Q03721 635 aa7.96□□□□□ -1.14
KDM1A-204ENST00000481879 C6orf132Q5T0Z8 1188 aa7.96□□□□□ -1.14
KDM1A-204ENST00000481879 SPRYD3Q8NCJ5 442 aa7.96□□□□□ -1.14
KDM1A-204ENST00000481879 ONECUT3O60422 494 aaPredicted RBP7.95□□□□□ -1.14
KDM1A-204ENST00000481879 LAPTM4BQ86VI4 370 aa7.94□□□□□ -1.14
KDM1A-204ENST00000481879 ANKK1Q8NFD2 765 aa7.94□□□□□ -1.14
KDM1A-204ENST00000481879 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.94□□□□□ -1.14
KDM1A-204ENST00000481879 KIAA1468Q9P260 1216 aa7.94□□□□□ -1.14
KDM1A-204ENST00000481879 DDX12PQ92771 950 aa7.93□□□□□ -1.14
KDM1A-204ENST00000481879 RBM33Q96EV2 1170 aaKnown RBP7.93□□□□□ -1.14
KDM1A-204ENST00000481879 TRIM6-TRIM34B2RNG4 842 aa7.9□□□□□ -1.14
KDM1A-204ENST00000481879 AMER1Q5JTC6 1135 aaPredicted RBP7.9□□□□□ -1.14
KDM1A-204ENST00000481879 NYAP1Q6ZVC0 841 aa7.9□□□□□ -1.14
KDM1A-204ENST00000481879 ZFRQ96KR1 1074 aaKnown RBP7.9□□□□□ -1.14
KDM1A-204ENST00000481879 SOWAHBA6NEL2 793 aa7.89□□□□□ -1.15
KDM1A-204ENST00000481879 SPDYE16A6NNV3 312 aaPredicted RBP7.89□□□□□ -1.15
KDM1A-204ENST00000481879 BCAMP50895 628 aa7.89□□□□□ -1.15
KDM1A-204ENST00000481879 NBR1Q14596 966 aa7.88□□□□□ -1.15
KDM1A-204ENST00000481879 PDIA6Q15084 440 aa7.88□□□□□ -1.15
KDM1A-204ENST00000481879 PRKD2Q9BZL6 878 aa7.88□□□□□ -1.15
KDM1A-204ENST00000481879 SEPT9Q9UHD8 586 aaPredicted RBP7.88□□□□□ -1.15
KDM1A-204ENST00000481879 EN1Q05925 392 aaPredicted RBP7.87□□□□□ -1.15
KDM1A-204ENST00000481879 E2F4Q16254 413 aa7.87□□□□□ -1.15
KDM1A-204ENST00000481879 CFAP44Q96MT7 982 aa7.87□□□□□ -1.15
KDM1A-204ENST00000481879 WDR70Q9NW82 654 aa7.87□□□□□ -1.15
KDM1A-204ENST00000481879 MAP3K7O43318 606 aa7.86□□□□□ -1.15
KDM1A-204ENST00000481879 FAM98CQ17RN3 349 aaKnown RBP7.86□□□□□ -1.15
KDM1A-204ENST00000481879 PAXIP1Q6ZW49 1069 aaPredicted RBP7.86□□□□□ -1.15
KDM1A-204ENST00000481879 LOC100996750A0A140TA64 210 aa7.85□□□□□ -1.15
KDM1A-204ENST00000481879 TSR1Q2NL82 804 aaKnown RBP7.85□□□□□ -1.15
KDM1A-204ENST00000481879 PACS2Q86VP3 889 aa7.85□□□□□ -1.15
KDM1A-204ENST00000481879 KRTAP4-6Q9BYQ5 205 aa7.85□□□□□ -1.15
KDM1A-204ENST00000481879 WBP1LQ9NX94 342 aa7.85□□□□□ -1.15
KDM1A-204ENST00000481879 ARIH1Q9Y4X5 557 aaPredicted RBP7.84□□□□□ -1.15
KDM1A-204ENST00000481879 RTN4Q9NQC3 1192 aaKnown RBP7.83□□□□□ -1.16
KDM1A-204ENST00000481879 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.83□□□□□ -1.16
KDM1A-204ENST00000481879 TSKSQ9UJT2 592 aa7.83□□□□□ -1.16
KDM1A-204ENST00000481879 GRXCR2A6NFK2 248 aa7.82□□□□□ -1.16
KDM1A-204ENST00000481879 LRCH3Q96II8 777 aa7.82□□□□□ -1.16
KDM1A-204ENST00000481879 TSR3Q9UJK0 312 aaKnown RBP7.82□□□□□ -1.16
KDM1A-204ENST00000481879 V9GY48 417 aaPredicted RBP7.82□□□□□ -1.16
KDM1A-204ENST00000481879 PRSS12P56730 875 aa7.8□□□□□ -1.16
KDM1A-204ENST00000481879 CERKQ8TCT0 537 aa7.8□□□□□ -1.16
KDM1A-204ENST00000481879 CDCA7LQ96GN5 454 aa7.8□□□□□ -1.16
KDM1A-204ENST00000481879 PDZRN3Q9UPQ7 1066 aa7.8□□□□□ -1.16
KDM1A-204ENST00000481879 HPS5Q9UPZ3 1129 aa7.8□□□□□ -1.16
KDM1A-204ENST00000481879 PRIM1P49642 420 aaKnown RBP7.79□□□□□ -1.16
KDM1A-204ENST00000481879 LCE2AQ5TA79 106 aaPredicted RBP7.79□□□□□ -1.16
KDM1A-204ENST00000481879 SMAPO00193 183 aa7.77□□□□□ -1.17
KDM1A-204ENST00000481879 OSBPP22059 807 aa7.77□□□□□ -1.17
KDM1A-204ENST00000481879 PPP4CP60510 307 aa7.77□□□□□ -1.17
KDM1A-204ENST00000481879 TREML4Q6UXN2 200 aa7.77□□□□□ -1.17
KDM1A-204ENST00000481879 FAM198AQ9UFP1 575 aa7.77□□□□□ -1.17
KDM1A-204ENST00000481879 TATDN2Q93075 761 aa7.76□□□□□ -1.17
KDM1A-204ENST00000481879 SAMD7Q7Z3H4 446 aa7.75□□□□□ -1.17
KDM1A-204ENST00000481879 PNMA3Q9UL41 463 aa7.75□□□□□ -1.17
KDM1A-204ENST00000481879 POTECB2RU33 542 aa7.74□□□□□ -1.17
KDM1A-204ENST00000481879 NBPF26B4DH59 902 aa7.74□□□□□ -1.17
KDM1A-204ENST00000481879 C3orf80F5H4A9 247 aa7.73□□□□□ -1.17
KDM1A-204ENST00000481879 HDGFP51858 240 aaKnown RBP7.72□□□□□ -1.17
KDM1A-204ENST00000481879 PPP1R18Q6NYC8 613 aa7.72□□□□□ -1.17
KDM1A-204ENST00000481879 NUDT18Q6ZVK8 323 aa7.72□□□□□ -1.17
KDM1A-204ENST00000481879 CDHR5Q9HBB8 845 aa7.72□□□□□ -1.17
KDM1A-204ENST00000481879 RBM27Q9P2N5 1060 aaKnown RBP7.71□□□□□ -1.18
KDM1A-204ENST00000481879 TJAP1Q5JTD0 557 aa7.7□□□□□ -1.18
KDM1A-204ENST00000481879 STK17AQ9UEE5 414 aa7.7□□□□□ -1.18
KDM1A-204ENST00000481879 NPDC1Q9NQX5 325 aaPredicted RBP7.69□□□□□ -1.18
KDM1A-204ENST00000481879 MYT1Q01538 1121 aa7.68□□□□□ -1.18
KDM1A-204ENST00000481879 TTC13Q8NBP0 860 aa7.67□□□□□ -1.18
KDM1A-204ENST00000481879 IL21Q9HBE4 155 aa7.67□□□□□ -1.18
KDM1A-204ENST00000481879 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.67□□□□□ -1.18
KDM1A-204ENST00000481879 TSHZ2Q9NRE2 1034 aa7.67□□□□□ -1.18
KDM1A-204ENST00000481879 RNF40O75150 1001 aa7.66□□□□□ -1.18
KDM1A-204ENST00000481879 PADI6Q6TGC4 694 aa7.66□□□□□ -1.18
KDM1A-204ENST00000481879 ARHGEF1Q92888 912 aaKnown RBP7.66□□□□□ -1.18
KDM1A-204ENST00000481879 MTRQ99707 1265 aa7.66□□□□□ -1.18
KDM1A-204ENST00000481879 NECTIN2Q92692 538 aa7.64□□□□□ -1.19
KDM1A-204ENST00000481879 MLLT3P42568 568 aaPredicted RBP7.63□□□□□ -1.19
KDM1A-204ENST00000481879 APLP1P51693 650 aa7.63□□□□□ -1.19
KDM1A-204ENST00000481879 SWT1Q5T5J6 900 aaKnown RBP7.63□□□□□ -1.19
KDM1A-204ENST00000481879 TRIM67Q6ZTA4 783 aa7.63□□□□□ -1.19
KDM1A-204ENST00000481879 SLF2Q8IX21 1173 aa7.63□□□□□ -1.19
KDM1A-204ENST00000481879 DGAT1O75907 488 aa7.62□□□□□ -1.19
KDM1A-204ENST00000481879 PKDCCQ504Y2 493 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms