RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 GORABQ5T7V8 394 aa11.92□□□□□ -0.5
GARNL3-216ENST00000481242 SYNJ2O15056 1496 aa11.92□□□□□ -0.5
GARNL3-216ENST00000481242 NOP58Q9Y2X3 529 aaKnown RBP11.92□□□□□ -0.5
GARNL3-216ENST00000481242 NUTM2DQ5VT03 806 aaPredicted RBP11.91□□□□□ -0.5
GARNL3-216ENST00000481242 SMC4Q9NTJ3 1288 aa11.9□□□□□ -0.5
GARNL3-216ENST00000481242 ST20-MTHFSA0A0A6YYL1 179 aa11.9□□□□□ -0.5
GARNL3-216ENST00000481242 ITPRIPQ8IWB1 547 aa11.9□□□□□ -0.5
GARNL3-216ENST00000481242 PKNOX2Q96KN3 472 aa11.9□□□□□ -0.5
GARNL3-216ENST00000481242 C1orf141Q5JVX7 400 aa11.9□□□□□ -0.51
GARNL3-216ENST00000481242 B4GALNT3Q6L9W6 998 aa11.9□□□□□ -0.51
GARNL3-216ENST00000481242 RUSC2Q8N2Y8 1516 aa11.89□□□□□ -0.51
GARNL3-216ENST00000481242 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.89□□□□□ -0.51
GARNL3-216ENST00000481242 HMGXB3Q12766 1538 aa11.89□□□□□ -0.51
GARNL3-216ENST00000481242 MYBBP1AQ9BQG0 1328 aaKnown RBP11.89□□□□□ -0.51
GARNL3-216ENST00000481242 GTF2E1P29083 439 aaPredicted RBP11.89□□□□□ -0.51
GARNL3-216ENST00000481242 FGD6Q6ZV73 1430 aa11.88□□□□□ -0.51
GARNL3-216ENST00000481242 CASKIN1Q8WXD9 1431 aa11.88□□□□□ -0.51
GARNL3-216ENST00000481242 HTATSF1O43719 755 aaKnown RBP11.88□□□□□ -0.51
GARNL3-216ENST00000481242 EVA1CP58658 441 aa11.88□□□□□ -0.51
GARNL3-216ENST00000481242 PLEKHH2Q8IVE3 1493 aa11.88□□□□□ -0.51
GARNL3-216ENST00000481242 TSHZ2Q9NRE2 1034 aa11.88□□□□□ -0.51
GARNL3-216ENST00000481242 FYCO1Q9BQS8 1478 aa11.88□□□□□ -0.51
GARNL3-216ENST00000481242 CENPJQ9HC77 1338 aaPredicted RBP11.87□□□□□ -0.51
GARNL3-216ENST00000481242 TEFQ10587 303 aa11.87□□□□□ -0.51
GARNL3-216ENST00000481242 PODXL2Q9NZ53 605 aa11.87□□□□□ -0.51
GARNL3-216ENST00000481242 PTMSP20962 102 aa11.86□□□□□ -0.51
GARNL3-216ENST00000481242 LTV1Q96GA3 475 aaPredicted RBP11.86□□□□□ -0.51
GARNL3-216ENST00000481242 PANK3Q9H999 370 aa11.86□□□□□ -0.51
GARNL3-216ENST00000481242 RBM19Q9Y4C8 960 aaKnown RBP11.86□□□□□ -0.51
GARNL3-216ENST00000481242 ANKRD50Q9ULJ7 1429 aa11.86□□□□□ -0.51
GARNL3-216ENST00000481242 NUTM2FA1L443 756 aa11.86□□□□□ -0.51
GARNL3-216ENST00000481242 CCDC34Q96HJ3 373 aa11.86□□□□□ -0.51
GARNL3-216ENST00000481242 ISY1Q9ULR0 285 aaKnown RBP11.86□□□□□ -0.51
GARNL3-216ENST00000481242 PRG4Q92954 1404 aaPredicted RBP11.85□□□□□ -0.51
GARNL3-216ENST00000481242 ATF3P18847 181 aa11.85□□□□□ -0.51
GARNL3-216ENST00000481242 G3V3G9 751 aa11.85□□□□□ -0.51
GARNL3-216ENST00000481242 PSME1Q06323 249 aa11.85□□□□□ -0.51
GARNL3-216ENST00000481242 DCAF8Q5TAQ9 597 aa11.85□□□□□ -0.51
GARNL3-216ENST00000481242 ERICH3Q5RHP9 1530 aa11.85□□□□□ -0.51
GARNL3-216ENST00000481242 GNL2Q13823 731 aaKnown RBP11.85□□□□□ -0.51
GARNL3-216ENST00000481242 CHMP4CQ96CF2 233 aa11.85□□□□□ -0.51
GARNL3-216ENST00000481242 USP47Q96K76 1375 aa11.84□□□□□ -0.51
GARNL3-216ENST00000481242 MINK1Q8N4C8 1332 aaPredicted RBP11.84□□□□□ -0.51
GARNL3-216ENST00000481242 MIA2Q96PC5 1412 aa11.84□□□□□ -0.51
GARNL3-216ENST00000481242 TCERG1O14776 1098 aaKnown RBP11.84□□□□□ -0.51
GARNL3-216ENST00000481242 CHMP3Q9Y3E7 222 aa11.84□□□□□ -0.51
GARNL3-216ENST00000481242 TTC5Q8N0Z6 440 aa11.83□□□□□ -0.52
GARNL3-216ENST00000481242 LRRFIP1Q32MZ4 808 aaKnown RBP11.82□□□□□ -0.52
GARNL3-216ENST00000481242 EFCAB5A4FU69 1503 aa11.82□□□□□ -0.52
GARNL3-216ENST00000481242 E9PSI1 815 aa11.82□□□□□ -0.52
GARNL3-216ENST00000481242 NEXNQ0ZGT2 675 aa11.82□□□□□ -0.52
GARNL3-216ENST00000481242 UBE2Q2Q8WVN8 375 aa11.82□□□□□ -0.52
GARNL3-216ENST00000481242 APBB1O00213 710 aa11.81□□□□□ -0.52
GARNL3-216ENST00000481242 SLC4A10Q6U841 1118 aa11.81□□□□□ -0.52
GARNL3-216ENST00000481242 KIF3AQ9Y496 699 aa11.81□□□□□ -0.52
GARNL3-216ENST00000481242 DIAPH1O60610 1272 aaKnown RBP11.81□□□□□ -0.52
GARNL3-216ENST00000481242 L1TD1Q5T7N2 865 aaKnown RBP11.81□□□□□ -0.52
GARNL3-216ENST00000481242 RRBP1Q9P2E9 1410 aaKnown RBP11.81□□□□□ -0.52
GARNL3-216ENST00000481242 LRRC9Q6ZRR7 1453 aa11.8□□□□□ -0.52
GARNL3-216ENST00000481242 ARHGAP5Q13017 1502 aa11.8□□□□□ -0.52
GARNL3-216ENST00000481242 THEMISQ8N1K5 641 aaPredicted RBP11.8□□□□□ -0.52
GARNL3-216ENST00000481242 KIF21BO75037 1637 aa11.8□□□□□ -0.52
GARNL3-216ENST00000481242 NAP1L5Q96NT1 182 aaPredicted RBP11.8□□□□□ -0.52
GARNL3-216ENST00000481242 SLC52A1Q9NWF4 448 aa11.8□□□□□ -0.52
GARNL3-216ENST00000481242 HFM1A2PYH4 1435 aa11.8□□□□□ -0.52
GARNL3-216ENST00000481242 POGZQ7Z3K3 1410 aa11.79□□□□□ -0.52
GARNL3-216ENST00000481242 FRAT2O75474 233 aaPredicted RBP11.79□□□□□ -0.52
GARNL3-216ENST00000481242 TOPBP1Q92547 1522 aa11.79□□□□□ -0.52
GARNL3-216ENST00000481242 DDX58O95786 925 aaKnown RBP11.79□□□□□ -0.52
GARNL3-216ENST00000481242 DNTTIP2Q5QJE6 756 aaKnown RBP11.79□□□□□ -0.52
GARNL3-216ENST00000481242 CC2D2AQ9P2K1 1620 aa11.79□□□□□ -0.52
GARNL3-216ENST00000481242 NCOA2Q15596 1464 aa11.79□□□□□ -0.52
GARNL3-216ENST00000481242 TULP1O00294 542 aaPredicted RBP11.79□□□□□ -0.52
GARNL3-216ENST00000481242 GBP4Q96PP9 640 aa11.79□□□□□ -0.52
GARNL3-216ENST00000481242 TAOK2Q9UL54 1235 aa11.79□□□□□ -0.52
GARNL3-216ENST00000481242 USP35Q9P2H5 1018 aa11.78□□□□□ -0.52
GARNL3-216ENST00000481242 RAPGEF4Q8WZA2 1011 aa11.78□□□□□ -0.52
GARNL3-216ENST00000481242 PLCB2Q00722 1185 aa11.77□□□□□ -0.52
GARNL3-216ENST00000481242 PRDM2Q13029 1718 aa11.77□□□□□ -0.52
GARNL3-216ENST00000481242 CCDC146Q8IYE0 955 aa11.77□□□□□ -0.52
GARNL3-216ENST00000481242 PRKRIP1Q9H875 184 aaPredicted RBP11.77□□□□□ -0.53
GARNL3-216ENST00000481242 AFAP1Q8N556 730 aa11.77□□□□□ -0.53
GARNL3-216ENST00000481242 TRIM6-TRIM34B2RNG4 842 aa11.76□□□□□ -0.53
GARNL3-216ENST00000481242 GPRASP1Q5JY77 1395 aa11.76□□□□□ -0.53
GARNL3-216ENST00000481242 ZKSCAN2Q63HK3 967 aa11.76□□□□□ -0.53
GARNL3-216ENST00000481242 API5Q9BZZ5 524 aaKnown RBP11.76□□□□□ -0.53
GARNL3-216ENST00000481242 TROQ12816 1431 aaPredicted RBP11.76□□□□□ -0.53
GARNL3-216ENST00000481242 ZNF644Q9H582 1327 aaPredicted RBP11.76□□□□□ -0.53
GARNL3-216ENST00000481242 MEX3CQ5U5Q3 659 aaKnown RBP11.76□□□□□ -0.53
GARNL3-216ENST00000481242 FANCIQ9NVI1 1328 aa11.76□□□□□ -0.53
GARNL3-216ENST00000481242 CSPP1Q1MSJ5 1256 aa11.75□□□□□ -0.53
GARNL3-216ENST00000481242 RTN4Q9NQC3 1192 aaKnown RBP11.75□□□□□ -0.53
GARNL3-216ENST00000481242 SYAP1Q96A49 352 aaPredicted RBP11.75□□□□□ -0.53
GARNL3-216ENST00000481242 ROCK1Q13464 1354 aa11.75□□□□□ -0.53
GARNL3-216ENST00000481242 TPRNQ4KMQ1 711 aa11.75□□□□□ -0.53
GARNL3-216ENST00000481242 TXNDC2Q86VQ3 553 aa11.75□□□□□ -0.53
GARNL3-216ENST00000481242 POLA1P09884 1462 aaPredicted RBP11.75□□□□□ -0.53
GARNL3-216ENST00000481242 WASHC2AQ641Q2 1341 aa11.74□□□□□ -0.53
GARNL3-216ENST00000481242 CHAF1AQ13111 956 aaPredicted RBP11.74□□□□□ -0.53
GARNL3-216ENST00000481242 CLUAP1Q96AJ1 413 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms