RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 CC2D1BQ5T0F9 858 aaKnown RBP25.51■■□□□ 1.67
CCM2-214ENST00000481194 USP47Q96K76 1375 aa25.49■■□□□ 1.67
CCM2-214ENST00000481194 SALL2Q9Y467 1007 aaPredicted RBP25.49■■□□□ 1.67
CCM2-214ENST00000481194 MORC1Q86VD1 984 aa25.48■■□□□ 1.67
CCM2-214ENST00000481194 DENND4BO75064 1496 aaPredicted RBP25.48■■□□□ 1.67
CCM2-214ENST00000481194 TCOF1Q13428 1488 aaKnown RBP25.47■■□□□ 1.67
CCM2-214ENST00000481194 SAFB2Q14151 953 aaKnown RBP eCLIP25.47■■□□□ 1.67
CCM2-214ENST00000481194 TERF2IPQ9NYB0 399 aa25.46■■□□□ 1.67
CCM2-214ENST00000481194 TEX14Q8IWB6 1497 aa25.46■■□□□ 1.67
CCM2-214ENST00000481194 MAPK8IP3Q9UPT6 1336 aa25.45■■□□□ 1.67
CCM2-214ENST00000481194 NCOA1Q15788 1441 aa25.45■■□□□ 1.66
CCM2-214ENST00000481194 HAP1P54257 671 aaPredicted RBP25.44■■□□□ 1.66
CCM2-214ENST00000481194 ZBTB7CA1YPR0 619 aa25.41■■□□□ 1.66
CCM2-214ENST00000481194 RAPGEF3O95398 923 aa25.41■■□□□ 1.66
CCM2-214ENST00000481194 FKBP8Q14318 412 aa25.39■■□□□ 1.66
CCM2-214ENST00000481194 SLC52A1Q9NWF4 448 aa25.39■■□□□ 1.66
CCM2-214ENST00000481194 EVC2Q86UK5 1308 aa25.39■■□□□ 1.65
CCM2-214ENST00000481194 ST20-MTHFSA0A0A6YYL1 179 aa25.39■■□□□ 1.65
CCM2-214ENST00000481194 PPM1GO15355 546 aaPredicted RBP25.39■■□□□ 1.65
CCM2-214ENST00000481194 NUTM2DQ5VT03 806 aaPredicted RBP25.38■■□□□ 1.65
CCM2-214ENST00000481194 TRAK1Q9UPV9 953 aa25.37■■□□□ 1.65
CCM2-214ENST00000481194 RPGRIP1LQ68CZ1 1315 aa25.36■■□□□ 1.65
CCM2-214ENST00000481194 PPP6R1Q9UPN7 881 aa25.35■■□□□ 1.65
CCM2-214ENST00000481194 SHANK2Q9UPX8 1470 aa25.35■■□□□ 1.65
CCM2-214ENST00000481194 DUOX2Q9NRD8 1548 aa25.33■■□□□ 1.65
CCM2-214ENST00000481194 ERBINQ96RT1 1412 aa25.32■■□□□ 1.64
CCM2-214ENST00000481194 UHRF1BP1LA0JNW5 1464 aa25.31■■□□□ 1.64
CCM2-214ENST00000481194 ZNF518AQ6AHZ1 1483 aa25.31■■□□□ 1.64
CCM2-214ENST00000481194 CHD1O14646 1710 aa25.3■■□□□ 1.64
CCM2-214ENST00000481194 DHX29Q7Z478 1369 aaKnown RBP25.3■■□□□ 1.64
CCM2-214ENST00000481194 TNNT2P45379 298 aaPredicted RBP25.3■■□□□ 1.64
CCM2-214ENST00000481194 LMOD2Q6P5Q4 547 aa25.29■■□□□ 1.64
CCM2-214ENST00000481194 SYCP2Q9BX26 1530 aa25.28■■□□□ 1.64
CCM2-214ENST00000481194 ANKRD30BQ9BXX2 1392 aa25.28■■□□□ 1.64
CCM2-214ENST00000481194 CENPJQ9HC77 1338 aaPredicted RBP25.26■■□□□ 1.63
CCM2-214ENST00000481194 U2SURPO15042 1029 aaKnown RBP25.25■■□□□ 1.63
CCM2-214ENST00000481194 ABCA8O94911 1581 aa25.25■■□□□ 1.63
CCM2-214ENST00000481194 NLRP13Q86W25 1043 aa25.23■■□□□ 1.63
CCM2-214ENST00000481194 ABCC10Q5T3U5 1492 aa25.23■■□□□ 1.63
CCM2-214ENST00000481194 RTEL1-TNFRSF6BF6WH68 1400 aa25.22■■□□□ 1.63
CCM2-214ENST00000481194 DNMT1P26358 1616 aaKnown RBP25.2■■□□□ 1.62
CCM2-214ENST00000481194 CCDC136Q96JN2 1154 aa25.19■■□□□ 1.62
CCM2-214ENST00000481194 MYBBP1AQ9BQG0 1328 aaKnown RBP25.19■■□□□ 1.62
CCM2-214ENST00000481194 CCDC7Q96M83 1385 aa25.19■■□□□ 1.62
CCM2-214ENST00000481194 PLEKHG5O94827 1062 aa25.18■■□□□ 1.62
CCM2-214ENST00000481194 CGNL1Q0VF96 1302 aa25.18■■□□□ 1.62
CCM2-214ENST00000481194 THEMISQ8N1K5 641 aaPredicted RBP25.17■■□□□ 1.62
CCM2-214ENST00000481194 NGDNQ8NEJ9 315 aaKnown RBP25.17■■□□□ 1.62
CCM2-214ENST00000481194 PANK3Q9H999 370 aa25.17■■□□□ 1.62
CCM2-214ENST00000481194 KDM5BQ9UGL1 1544 aa25.15■■□□□ 1.62
CCM2-214ENST00000481194 MYH16Q9H6N6 1097 aa25.14■■□□□ 1.62
CCM2-214ENST00000481194 A2MP01023 1474 aa25.14■■□□□ 1.62
CCM2-214ENST00000481194 FAM135AQ9P2D6 1515 aa25.14■■□□□ 1.61
CCM2-214ENST00000481194 CFAP74Q9C0B2 1584 aa25.14■■□□□ 1.61
CCM2-214ENST00000481194 MS4A1P11836 297 aa25.13■■□□□ 1.61
CCM2-214ENST00000481194 CALD1Q05682 793 aaKnown RBP25.13■■□□□ 1.61
CCM2-214ENST00000481194 PTPRKQ15262 1439 aa25.13■■□□□ 1.61
CCM2-214ENST00000481194 PAK3O75914 559 aaPredicted RBP25.11■■□□□ 1.61
CCM2-214ENST00000481194 NPM2Q86SE8 214 aaKnown RBP25.11■■□□□ 1.61
CCM2-214ENST00000481194 MINK1Q8N4C8 1332 aaPredicted RBP25.11■■□□□ 1.61
CCM2-214ENST00000481194 CNTLNQ9NXG0 1405 aa25.11■■□□□ 1.61
CCM2-214ENST00000481194 CHMP4BQ9H444 224 aaKnown RBP25.1■■□□□ 1.61
CCM2-214ENST00000481194 ADGRL2O95490 1459 aa25.1■■□□□ 1.61
CCM2-214ENST00000481194 NEUROD2Q15784 382 aa25.09■■□□□ 1.61
CCM2-214ENST00000481194 KIF7Q2M1P5 1343 aa25.09■■□□□ 1.61
CCM2-214ENST00000481194 RPRD2Q5VT52 1461 aaKnown RBP25.08■■□□□ 1.61
CCM2-214ENST00000481194 TRAPPC8Q9Y2L5 1435 aa25.08■■□□□ 1.61
CCM2-214ENST00000481194 CFAP70Q5T0N1 1121 aa25.06■■□□□ 1.6
CCM2-214ENST00000481194 TXNDC2Q86VQ3 553 aa25.06■■□□□ 1.6
CCM2-214ENST00000481194 PRKRIP1Q9H875 184 aaPredicted RBP25.05■■□□□ 1.6
CCM2-214ENST00000481194 NEO1Q92859 1461 aa25.04■■□□□ 1.6
CCM2-214ENST00000481194 U2AF1L5P0DN76 240 aaPredicted RBP25.04■■□□□ 1.6
CCM2-214ENST00000481194 U2AF1Q01081 240 aaKnown RBP eCLIP25.04■■□□□ 1.6
CCM2-214ENST00000481194 ARHGEF5Q12774 1597 aa25.03■■□□□ 1.6
CCM2-214ENST00000481194 COG3Q96JB2 828 aa25.02■■□□□ 1.6
CCM2-214ENST00000481194 MYO5CQ9NQX4 1742 aa25.01■■□□□ 1.59
CCM2-214ENST00000481194 NBPF8Q3BBV2 869 aa25.01■■□□□ 1.59
CCM2-214ENST00000481194 SOX12O15370 315 aa25.01■■□□□ 1.59
CCM2-214ENST00000481194 RTF1Q92541 710 aaKnown RBP25.01■■□□□ 1.59
CCM2-214ENST00000481194 LAS1LQ9Y4W2 734 aaKnown RBP25■■□□□ 1.59
CCM2-214ENST00000481194 FTSJ3Q8IY81 847 aaKnown RBP25■■□□□ 1.59
CCM2-214ENST00000481194 MAGI3Q5TCQ9 1506 aa24.99■■□□□ 1.59
CCM2-214ENST00000481194 UPF2Q9HAU5 1272 aaKnown RBP24.99■■□□□ 1.59
CCM2-214ENST00000481194 PDE3BQ13370 1112 aa24.99■■□□□ 1.59
CCM2-214ENST00000481194 WASHC2AQ641Q2 1341 aa24.98■■□□□ 1.59
CCM2-214ENST00000481194 ANP32AP39687 249 aaKnown RBP24.98■■□□□ 1.59
CCM2-214ENST00000481194 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.97■■□□□ 1.59
CCM2-214ENST00000481194 ADGBQ8N7X0 1667 aa24.97■■□□□ 1.59
CCM2-214ENST00000481194 LMOD3Q0VAK6 560 aa24.96■■□□□ 1.59
CCM2-214ENST00000481194 TMEM132EQ6IEE7 984 aa24.96■■□□□ 1.59
CCM2-214ENST00000481194 CHMP4AQ9BY43 222 aa24.96■■□□□ 1.59
CCM2-214ENST00000481194 ATP7AQ04656 1500 aa24.96■■□□□ 1.59
CCM2-214ENST00000481194 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.96■■□□□ 1.59
CCM2-214ENST00000481194 MAPKBP1O60336 1514 aa24.96■■□□□ 1.59
CCM2-214ENST00000481194 SUPT16HQ9Y5B9 1047 aaKnown RBP24.96■■□□□ 1.59
CCM2-214ENST00000481194 ANKLE2Q86XL3 938 aa24.95■■□□□ 1.58
CCM2-214ENST00000481194 BCL11AQ9H165 835 aa24.94■■□□□ 1.58
CCM2-214ENST00000481194 A0A0G2JS52 829 aa24.94■■□□□ 1.58
CCM2-214ENST00000481194 NBPF1Q3BBV0 1214 aa24.93■■□□□ 1.58
CCM2-214ENST00000481194 ZCCHC11Q5TAX3 1644 aaKnown RBP24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms