RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 MAP3K7O43318 606 aa13.8□□□□□ -0.2
CBX3-206ENST00000481057 EMP3P54852 163 aa13.8□□□□□ -0.2
CBX3-206ENST00000481057 ZC3H15Q8WU90 426 aaKnown RBP13.8□□□□□ -0.2
CBX3-206ENST00000481057 RBM33Q96EV2 1170 aaKnown RBP13.8□□□□□ -0.2
CBX3-206ENST00000481057 MARVELD3Q96A59 401 aa13.79□□□□□ -0.2
CBX3-206ENST00000481057 NUTM2FA1L443 756 aa13.78□□□□□ -0.2
CBX3-206ENST00000481057 GPR37O15354 613 aa13.78□□□□□ -0.2
CBX3-206ENST00000481057 ADAM33Q9BZ11 813 aa13.78□□□□□ -0.2
CBX3-206ENST00000481057 ERBB3P21860 1342 aa13.76□□□□□ -0.21
CBX3-206ENST00000481057 TSR1Q2NL82 804 aaKnown RBP13.76□□□□□ -0.21
CBX3-206ENST00000481057 CDHR5Q9HBB8 845 aa13.76□□□□□ -0.21
CBX3-206ENST00000481057 VARS2Q5ST30 1063 aaKnown RBP13.74□□□□□ -0.21
CBX3-206ENST00000481057 C6orf132Q5T0Z8 1188 aa13.73□□□□□ -0.21
CBX3-206ENST00000481057 BCL2L12Q9HB09 334 aa13.73□□□□□ -0.21
CBX3-206ENST00000481057 MYO15BQ96JP2 1530 aa13.71□□□□□ -0.21
CBX3-206ENST00000481057 FCHSD2O94868 740 aa13.71□□□□□ -0.21
CBX3-206ENST00000481057 PTGDRQ13258 359 aa13.71□□□□□ -0.21
CBX3-206ENST00000481057 FAM205CA6NFA0 338 aa13.7□□□□□ -0.22
CBX3-206ENST00000481057 ZMYND10O75800 440 aa13.7□□□□□ -0.22
CBX3-206ENST00000481057 THOC2Q8NI27 1593 aaKnown RBP13.7□□□□□ -0.22
CBX3-206ENST00000481057 RIMBP3CA6NJZ7 1639 aa13.69□□□□□ -0.22
CBX3-206ENST00000481057 RIMBP3BA6NNM3 1639 aa13.69□□□□□ -0.22
CBX3-206ENST00000481057 RIMBP3Q9UFD9 1639 aa13.69□□□□□ -0.22
CBX3-206ENST00000481057 NPDC1Q9NQX5 325 aaPredicted RBP13.69□□□□□ -0.22
CBX3-206ENST00000481057 HIC1Q14526 733 aa13.68□□□□□ -0.22
CBX3-206ENST00000481057 BARGINQ6ZT62 677 aa13.67□□□□□ -0.22
CBX3-206ENST00000481057 HS3ST6Q96QI5 342 aa13.67□□□□□ -0.22
CBX3-206ENST00000481057 PTPREP23469 700 aa13.66□□□□□ -0.22
CBX3-206ENST00000481057 POTEB3A0JP26 581 aa13.65□□□□□ -0.22
CBX3-206ENST00000481057 GNPATO15228 680 aa13.65□□□□□ -0.22
CBX3-206ENST00000481057 POTEBQ6S5H4 581 aa13.65□□□□□ -0.22
CBX3-206ENST00000481057 CERKQ8TCT0 537 aa13.65□□□□□ -0.22
CBX3-206ENST00000481057 BAZ1AQ9NRL2 1556 aaPredicted RBP13.63□□□□□ -0.23
CBX3-206ENST00000481057 PPP1R3GB7ZBB8 358 aa13.63□□□□□ -0.23
CBX3-206ENST00000481057 COL9A1P20849 921 aa13.63□□□□□ -0.23
CBX3-206ENST00000481057 POTEEQ6S8J3 1075 aa13.62□□□□□ -0.23
CBX3-206ENST00000481057 ZNF687Q8N1G0 1237 aa13.62□□□□□ -0.23
CBX3-206ENST00000481057 KCNK17Q96T54 332 aa13.62□□□□□ -0.23
CBX3-206ENST00000481057 NESP48681 1621 aa13.61□□□□□ -0.23
CBX3-206ENST00000481057 FECHP22830 423 aa13.6□□□□□ -0.23
CBX3-206ENST00000481057 PBX2P40425 430 aa13.59□□□□□ -0.23
CBX3-206ENST00000481057 KCNH8Q96L42 1107 aa13.59□□□□□ -0.23
CBX3-206ENST00000481057 RBM27Q9P2N5 1060 aaKnown RBP13.59□□□□□ -0.23
CBX3-206ENST00000481057 SCRIBQ14160 1630 aa13.58□□□□□ -0.24
CBX3-206ENST00000481057 ARHGAP33O14559 1287 aa13.58□□□□□ -0.24
CBX3-206ENST00000481057 MAP2K5Q13163 448 aa13.58□□□□□ -0.24
CBX3-206ENST00000481057 CYB5RLQ6IPT4 315 aa13.58□□□□□ -0.24
CBX3-206ENST00000481057 PSEN2P49810 448 aa13.57□□□□□ -0.24
CBX3-206ENST00000481057 SLC24A3Q9HC58 644 aa13.57□□□□□ -0.24
CBX3-206ENST00000481057 PRSS12P56730 875 aa13.56□□□□□ -0.24
CBX3-206ENST00000481057 PADI6Q6TGC4 694 aa13.56□□□□□ -0.24
CBX3-206ENST00000481057 AXIN2Q9Y2T1 843 aa13.56□□□□□ -0.24
CBX3-206ENST00000481057 KRI1Q8N9T8 703 aaKnown RBP13.55□□□□□ -0.24
CBX3-206ENST00000481057 TTC13Q8NBP0 860 aa13.55□□□□□ -0.24
CBX3-206ENST00000481057 CDCA7LQ96GN5 454 aa13.55□□□□□ -0.24
CBX3-206ENST00000481057 MINK1Q8N4C8 1332 aaPredicted RBP13.54□□□□□ -0.24
CBX3-206ENST00000481057 ZBED2Q9BTP6 218 aa13.53□□□□□ -0.24
CBX3-206ENST00000481057 DMRTA1Q5VZB9 504 aa13.52□□□□□ -0.25
CBX3-206ENST00000481057 ARHGEF11O15085 1522 aa13.51□□□□□ -0.25
CBX3-206ENST00000481057 IRF6O14896 467 aa13.51□□□□□ -0.25
CBX3-206ENST00000481057 CCDC102AQ96A19 550 aa13.51□□□□□ -0.25
CBX3-206ENST00000481057 TRIM6-TRIM34B2RNG4 842 aa13.5□□□□□ -0.25
CBX3-206ENST00000481057 PROX2Q3B8N5 592 aa13.5□□□□□ -0.25
CBX3-206ENST00000481057 AK7Q96M32 723 aa13.5□□□□□ -0.25
CBX3-206ENST00000481057 FAM198AQ9UFP1 575 aa13.5□□□□□ -0.25
CBX3-206ENST00000481057 TSKSQ9UJT2 592 aa13.5□□□□□ -0.25
CBX3-206ENST00000481057 SMARCA2P51531 1590 aa13.49□□□□□ -0.25
CBX3-206ENST00000481057 SLC4A5Q9BY07 1137 aa13.48□□□□□ -0.25
CBX3-206ENST00000481057 POTEGQ6S5H5 508 aa13.47□□□□□ -0.25
CBX3-206ENST00000481057 ONECUT3O60422 494 aaPredicted RBP13.46□□□□□ -0.25
CBX3-206ENST00000481057 ADGRG1Q9Y653 693 aa13.46□□□□□ -0.25
CBX3-206ENST00000481057 POTEMA6NI47 508 aa13.45□□□□□ -0.26
CBX3-206ENST00000481057 LSM11P83369 360 aaKnown RBP eCLIP13.44□□□□□ -0.26
CBX3-206ENST00000481057 FAM161AQ3B820 660 aa13.44□□□□□ -0.26
CBX3-206ENST00000481057 TRIM66O15016 1216 aa13.43□□□□□ -0.26
CBX3-206ENST00000481057 NBPF26B4DH59 902 aa13.42□□□□□ -0.26
CBX3-206ENST00000481057 C3orf80F5H4A9 247 aa13.42□□□□□ -0.26
CBX3-206ENST00000481057 PACS2Q86VP3 889 aa13.42□□□□□ -0.26
CBX3-206ENST00000481057 VPS9D1Q9Y2B5 631 aa13.42□□□□□ -0.26
CBX3-206ENST00000481057 TK2O00142 265 aa13.41□□□□□ -0.26
CBX3-206ENST00000481057 OATP04181 439 aa13.4□□□□□ -0.26
CBX3-206ENST00000481057 METTL3Q86U44 580 aaKnown RBP13.4□□□□□ -0.26
CBX3-206ENST00000481057 KRTAP3-3Q9BYR6 98 aa13.4□□□□□ -0.26
CBX3-206ENST00000481057 KRTAP3-2Q9BYR7 98 aa13.4□□□□□ -0.26
CBX3-206ENST00000481057 KIAA1468Q9P260 1216 aa13.4□□□□□ -0.26
CBX3-206ENST00000481057 RABGEF1Q9UJ41 708 aa13.4□□□□□ -0.26
CBX3-206ENST00000481057 PXYLP1Q8TE99 480 aa13.39□□□□□ -0.27
CBX3-206ENST00000481057 NUDT18Q6ZVK8 323 aa13.38□□□□□ -0.27
CBX3-206ENST00000481057 RBM46Q8TBY0 533 aaKnown RBP13.38□□□□□ -0.27
CBX3-206ENST00000481057 TATDN2Q93075 761 aa13.38□□□□□ -0.27
CBX3-206ENST00000481057 PNMA3Q9UL41 463 aa13.38□□□□□ -0.27
CBX3-206ENST00000481057 LMTK3Q96Q04 1460 aa13.37□□□□□ -0.27
CBX3-206ENST00000481057 SOCS7O14512 581 aa13.37□□□□□ -0.27
CBX3-206ENST00000481057 AMHR2Q16671 573 aa13.37□□□□□ -0.27
CBX3-206ENST00000481057 ADGRD1Q6QNK2 874 aa13.37□□□□□ -0.27
CBX3-206ENST00000481057 PHOX2BQ99453 314 aa13.37□□□□□ -0.27
CBX3-206ENST00000481057 EYA1Q99502 592 aa13.37□□□□□ -0.27
CBX3-206ENST00000481057 PDE4DQ08499 809 aa13.35□□□□□ -0.27
CBX3-206ENST00000481057 NCAPD3P42695 1498 aa13.35□□□□□ -0.27
CBX3-206ENST00000481057 SMAPO00193 183 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms