RNA–Protein interactions for RNA: ENST00000481020.5

NR1H3-220, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 1,704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-220ENST00000481020 NLRP13Q86W25 1043 aa19.06■□□□□ 0.64
NR1H3-220ENST00000481020 PPM1GO15355 546 aaPredicted RBP19.05■□□□□ 0.64
NR1H3-220ENST00000481020 RCAN3Q9UKA8 241 aa19.05■□□□□ 0.64
NR1H3-220ENST00000481020 CARD11Q9BXL7 1154 aa19.05■□□□□ 0.64
NR1H3-220ENST00000481020 PARD3Q8TEW0 1356 aa19.05■□□□□ 0.64
NR1H3-220ENST00000481020 NUP160Q12769 1436 aa19.04■□□□□ 0.64
NR1H3-220ENST00000481020 LAMC1P11047 1609 aa19.03■□□□□ 0.64
NR1H3-220ENST00000481020 DDRGK1Q96HY6 314 aa19.03■□□□□ 0.64
NR1H3-220ENST00000481020 BACH2Q9BYV9 841 aa19.02■□□□□ 0.63
NR1H3-220ENST00000481020 PRG4Q92954 1404 aaPredicted RBP19■□□□□ 0.63
NR1H3-220ENST00000481020 PDE4AP27815 886 aa19■□□□□ 0.63
NR1H3-220ENST00000481020 ARHGEF5Q12774 1597 aa18.99■□□□□ 0.63
NR1H3-220ENST00000481020 GPRASP1Q5JY77 1395 aa18.98■□□□□ 0.63
NR1H3-220ENST00000481020 BLMP54132 1417 aaPredicted RBP18.97■□□□□ 0.63
NR1H3-220ENST00000481020 C9orf84Q5VXU9 1444 aa18.97■□□□□ 0.63
NR1H3-220ENST00000481020 NUP155O75694 1391 aa18.97■□□□□ 0.63
NR1H3-220ENST00000481020 ST20-MTHFSA0A0A6YYL1 179 aa18.94■□□□□ 0.62
NR1H3-220ENST00000481020 EXOC6Q8TAG9 804 aa18.94■□□□□ 0.62
NR1H3-220ENST00000481020 POLR3GLQ9BT43 218 aa18.94■□□□□ 0.62
NR1H3-220ENST00000481020 CARMIL2Q6F5E8 1435 aa18.94■□□□□ 0.62
NR1H3-220ENST00000481020 ZNF326Q5BKZ1 582 aaKnown RBP18.94■□□□□ 0.62
NR1H3-220ENST00000481020 CDC42BPAQ5VT25 1732 aa18.94■□□□□ 0.62
NR1H3-220ENST00000481020 ABCC10Q5T3U5 1492 aa18.93■□□□□ 0.62
NR1H3-220ENST00000481020 TRPM1Q7Z4N2 1603 aa18.93■□□□□ 0.62
NR1H3-220ENST00000481020 CHD1O14646 1710 aa18.92■□□□□ 0.62
NR1H3-220ENST00000481020 RSPH4AQ5TD94 716 aa18.91■□□□□ 0.62
NR1H3-220ENST00000481020 PRAG1Q86YV5 1406 aa18.91■□□□□ 0.62
NR1H3-220ENST00000481020 EIF2AK4Q9P2K8 1649 aaKnown RBP18.91■□□□□ 0.62
NR1H3-220ENST00000481020 COL17A1Q9UMD9 1497 aaPredicted RBP18.91■□□□□ 0.62
NR1H3-220ENST00000481020 JPH4Q96JJ6 628 aa18.9■□□□□ 0.62
NR1H3-220ENST00000481020 ARID3CA6NKF2 412 aa18.88■□□□□ 0.61
NR1H3-220ENST00000481020 PER1O15534 1290 aaPredicted RBP18.88■□□□□ 0.61
NR1H3-220ENST00000481020 TSPY4P0CV99 314 aa18.88■□□□□ 0.61
NR1H3-220ENST00000481020 TSPY10P0CW01 314 aa18.88■□□□□ 0.61
NR1H3-220ENST00000481020 PRDM15P57071 1507 aaPredicted RBP18.87■□□□□ 0.61
NR1H3-220ENST00000481020 NEFMP07197 916 aa18.87■□□□□ 0.61
NR1H3-220ENST00000481020 PLB1Q6P1J6 1458 aa18.86■□□□□ 0.61
NR1H3-220ENST00000481020 FAM135AQ9P2D6 1515 aa18.85■□□□□ 0.61
NR1H3-220ENST00000481020 ABCA8O94911 1581 aa18.85■□□□□ 0.61
NR1H3-220ENST00000481020 PLEKHD1A6NEE1 506 aa18.85■□□□□ 0.61
NR1H3-220ENST00000481020 DCAF11Q8TEB1 546 aa18.85■□□□□ 0.61
NR1H3-220ENST00000481020 CCDC144AA2RUR9 1427 aa18.84■□□□□ 0.61
NR1H3-220ENST00000481020 UNC13BO14795 1591 aa18.82■□□□□ 0.6
NR1H3-220ENST00000481020 MAST1Q9Y2H9 1570 aa18.82■□□□□ 0.6
NR1H3-220ENST00000481020 ATP10AO60312 1499 aa18.82■□□□□ 0.6
NR1H3-220ENST00000481020 CCDC141Q6ZP82 1450 aa18.82■□□□□ 0.6
NR1H3-220ENST00000481020 CENPQQ7L2Z9 268 aaPredicted RBP18.82■□□□□ 0.6
NR1H3-220ENST00000481020 ZNF777Q9ULD5 760 aaPredicted RBP18.82■□□□□ 0.6
NR1H3-220ENST00000481020 CLASP1Q7Z460 1538 aa18.81■□□□□ 0.6
NR1H3-220ENST00000481020 NPM2Q86SE8 214 aaKnown RBP18.8■□□□□ 0.6
NR1H3-220ENST00000481020 KDM2BQ8NHM5 1336 aa18.79■□□□□ 0.6
NR1H3-220ENST00000481020 EIF3AQ14152 1382 aaKnown RBP18.79■□□□□ 0.6
NR1H3-220ENST00000481020 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.78■□□□□ 0.6
NR1H3-220ENST00000481020 ERBINQ96RT1 1412 aa18.78■□□□□ 0.6
NR1H3-220ENST00000481020 ATP10BO94823 1461 aa18.76■□□□□ 0.59
NR1H3-220ENST00000481020 TMF1P82094 1093 aa18.76■□□□□ 0.59
NR1H3-220ENST00000481020 CNGB1Q14028 1251 aaPredicted RBP18.76■□□□□ 0.59
NR1H3-220ENST00000481020 KDM2AQ9Y2K7 1162 aa18.76■□□□□ 0.59
NR1H3-220ENST00000481020 SHROOM2Q13796 1616 aa18.76■□□□□ 0.59
NR1H3-220ENST00000481020 TESK2Q96S53 571 aa18.75■□□□□ 0.59
NR1H3-220ENST00000481020 A2MP01023 1474 aa18.75■□□□□ 0.59
NR1H3-220ENST00000481020 GSE1Q14687 1217 aa18.74■□□□□ 0.59
NR1H3-220ENST00000481020 STAC3Q96MF2 364 aa18.74■□□□□ 0.59
NR1H3-220ENST00000481020 CRBNQ96SW2 442 aa18.74■□□□□ 0.59
NR1H3-220ENST00000481020 IQGAP3Q86VI3 1631 aa18.74■□□□□ 0.59
NR1H3-220ENST00000481020 RNF17Q9BXT8 1623 aaKnown RBP18.74■□□□□ 0.59
NR1H3-220ENST00000481020 NGEFQ8N5V2 710 aa18.74■□□□□ 0.59
NR1H3-220ENST00000481020 DAXXQ9UER7 740 aaPredicted RBP18.74■□□□□ 0.59
NR1H3-220ENST00000481020 PREX2Q70Z35 1606 aa18.73■□□□□ 0.59
NR1H3-220ENST00000481020 FAM161AQ3B820 660 aa18.73■□□□□ 0.59
NR1H3-220ENST00000481020 PLXNC1O60486 1568 aa18.73■□□□□ 0.59
NR1H3-220ENST00000481020 NPC1L1Q9UHC9 1359 aa18.72■□□□□ 0.59
NR1H3-220ENST00000481020 CDCA7LQ96GN5 454 aa18.72■□□□□ 0.59
NR1H3-220ENST00000481020 LAS1LQ9Y4W2 734 aaKnown RBP18.72■□□□□ 0.59
NR1H3-220ENST00000481020 MAGI2Q86UL8 1455 aa18.7■□□□□ 0.58
NR1H3-220ENST00000481020 CDCA8Q53HL2 280 aa18.7■□□□□ 0.58
NR1H3-220ENST00000481020 PIK3C2GO75747 1445 aa18.7■□□□□ 0.58
NR1H3-220ENST00000481020 PLA2R1Q13018 1463 aa18.69■□□□□ 0.58
NR1H3-220ENST00000481020 SAMD9LQ8IVG5 1584 aa18.69■□□□□ 0.58
NR1H3-220ENST00000481020 ZNF521Q96K83 1311 aa18.69■□□□□ 0.58
NR1H3-220ENST00000481020 DISP3Q9P2K9 1392 aa18.69■□□□□ 0.58
NR1H3-220ENST00000481020 PANK3Q9H999 370 aa18.68■□□□□ 0.58
NR1H3-220ENST00000481020 SLC24A1O60721 1099 aa18.67■□□□□ 0.58
NR1H3-220ENST00000481020 NFKBIBQ15653 356 aa18.67■□□□□ 0.58
NR1H3-220ENST00000481020 NINLQ9Y2I6 1382 aa18.67■□□□□ 0.58
NR1H3-220ENST00000481020 SYNMO15061 1565 aa18.67■□□□□ 0.58
NR1H3-220ENST00000481020 DUSP27Q5VZP5 1158 aa18.66■□□□□ 0.58
NR1H3-220ENST00000481020 IL27Q8NEV9 243 aa18.66■□□□□ 0.58
NR1H3-220ENST00000481020 GOLGA2Q08379 1002 aa18.65■□□□□ 0.58
NR1H3-220ENST00000481020 ABCC2Q92887 1545 aa18.64■□□□□ 0.58
NR1H3-220ENST00000481020 WDR43Q15061 677 aaKnown RBP eCLIP18.64■□□□□ 0.57
NR1H3-220ENST00000481020 MYO5CQ9NQX4 1742 aa18.64■□□□□ 0.57
NR1H3-220ENST00000481020 DUOX2Q9NRD8 1548 aa18.64■□□□□ 0.57
NR1H3-220ENST00000481020 WDR7Q9Y4E6 1490 aa18.64■□□□□ 0.57
NR1H3-220ENST00000481020 ZMYM3Q14202 1370 aa18.64■□□□□ 0.57
NR1H3-220ENST00000481020 PLIN1O60240 522 aa18.63■□□□□ 0.57
NR1H3-220ENST00000481020 NBPF1Q3BBV0 1214 aa18.63■□□□□ 0.57
NR1H3-220ENST00000481020 CC2D1BQ5T0F9 858 aaKnown RBP18.63■□□□□ 0.57
NR1H3-220ENST00000481020 SALL2Q9Y467 1007 aaPredicted RBP18.63■□□□□ 0.57
NR1H3-220ENST00000481020 CDC42BPBQ9Y5S2 1711 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms