RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 CFAP53Q96M91 514 aa7.99□□□□□ -1.13
CPS1-207ENST00000479988 SLC52A1Q9NWF4 448 aa7.99□□□□□ -1.13
CPS1-207ENST00000479988 SAMD9Q5K651 1589 aa7.98□□□□□ -1.13
CPS1-207ENST00000479988 TOM1O60784 492 aa7.98□□□□□ -1.13
CPS1-207ENST00000479988 ROCK1Q13464 1354 aa7.98□□□□□ -1.13
CPS1-207ENST00000479988 ABCC2Q92887 1545 aa7.98□□□□□ -1.13
CPS1-207ENST00000479988 CCDC144AA2RUR9 1427 aa7.97□□□□□ -1.13
CPS1-207ENST00000479988 TARBP1Q13395 1621 aaKnown RBP7.97□□□□□ -1.13
CPS1-207ENST00000479988 UBAP1LF5GYI3 381 aa7.97□□□□□ -1.13
CPS1-207ENST00000479988 EVA1CP58658 441 aa7.97□□□□□ -1.13
CPS1-207ENST00000479988 SF3B2Q13435 895 aaKnown RBP7.97□□□□□ -1.13
CPS1-207ENST00000479988 NAIPQ13075 1403 aa7.97□□□□□ -1.13
CPS1-207ENST00000479988 CEBPAP49715 358 aaPredicted RBP7.97□□□□□ -1.13
CPS1-207ENST00000479988 KNSTRNQ9Y448 316 aa7.96□□□□□ -1.13
CPS1-207ENST00000479988 TMF1P82094 1093 aa7.96□□□□□ -1.14
CPS1-207ENST00000479988 PSME1Q06323 249 aa7.96□□□□□ -1.14
CPS1-207ENST00000479988 EIF3AQ14152 1382 aaKnown RBP7.95□□□□□ -1.14
CPS1-207ENST00000479988 PTPN23Q9H3S7 1636 aa7.95□□□□□ -1.14
CPS1-207ENST00000479988 CEP170Q5SW79 1584 aa7.94□□□□□ -1.14
CPS1-207ENST00000479988 WDR43Q15061 677 aaKnown RBP eCLIP7.94□□□□□ -1.14
CPS1-207ENST00000479988 CANXP27824 592 aaKnown RBP7.94□□□□□ -1.14
CPS1-207ENST00000479988 ANKRD50Q9ULJ7 1429 aa7.94□□□□□ -1.14
CPS1-207ENST00000479988 TERF2IPQ9NYB0 399 aa7.94□□□□□ -1.14
CPS1-207ENST00000479988 NUDCQ9Y266 331 aa7.94□□□□□ -1.14
CPS1-207ENST00000479988 KIF14Q15058 1648 aa7.93□□□□□ -1.14
CPS1-207ENST00000479988 TCOF1Q13428 1488 aaKnown RBP7.93□□□□□ -1.14
CPS1-207ENST00000479988 PBRM1Q86U86 1689 aa7.93□□□□□ -1.14
CPS1-207ENST00000479988 HSPA2P54652 639 aa7.92□□□□□ -1.14
CPS1-207ENST00000479988 L3MBTL2Q969R5 705 aa7.92□□□□□ -1.14
CPS1-207ENST00000479988 TRAK1Q9UPV9 953 aa7.92□□□□□ -1.14
CPS1-207ENST00000479988 CDK13Q14004 1512 aaKnown RBP7.92□□□□□ -1.14
CPS1-207ENST00000479988 NUTM2BA6NNL0 878 aaPredicted RBP7.92□□□□□ -1.14
CPS1-207ENST00000479988 NUTM2EB1AL46 878 aaPredicted RBP7.92□□□□□ -1.14
CPS1-207ENST00000479988 NUTM2AQ8IVF1 878 aaPredicted RBP7.92□□□□□ -1.14
CPS1-207ENST00000479988 SLC26A8Q96RN1 970 aa7.92□□□□□ -1.14
CPS1-207ENST00000479988 C9orf84Q5VXU9 1444 aa7.92□□□□□ -1.14
CPS1-207ENST00000479988 HSPA5P11021 654 aaKnown RBP7.92□□□□□ -1.14
CPS1-207ENST00000479988 HIRIP3Q9BW71 556 aaPredicted RBP7.92□□□□□ -1.14
CPS1-207ENST00000479988 DAPK1P53355 1430 aa7.92□□□□□ -1.14
CPS1-207ENST00000479988 STAC3Q96MF2 364 aa7.91□□□□□ -1.14
CPS1-207ENST00000479988 HNRNPUQ00839 825 aaKnown RBP eCLIP7.9□□□□□ -1.14
CPS1-207ENST00000479988 KIAA0556O60303 1618 aa7.9□□□□□ -1.15
CPS1-207ENST00000479988 ATP10BO94823 1461 aa7.9□□□□□ -1.15
CPS1-207ENST00000479988 CCDC141Q6ZP82 1450 aa7.9□□□□□ -1.15
CPS1-207ENST00000479988 MAPKBP1O60336 1514 aa7.9□□□□□ -1.15
CPS1-207ENST00000479988 GPRASP1Q5JY77 1395 aa7.89□□□□□ -1.15
CPS1-207ENST00000479988 RAPGEF6Q8TEU7 1601 aa7.89□□□□□ -1.15
CPS1-207ENST00000479988 ZNF518AQ6AHZ1 1483 aa7.89□□□□□ -1.15
CPS1-207ENST00000479988 ROCK2O75116 1388 aaKnown RBP7.89□□□□□ -1.15
CPS1-207ENST00000479988 PLCH2O75038 1416 aa7.89□□□□□ -1.15
CPS1-207ENST00000479988 ESCO1Q5FWF5 840 aa7.89□□□□□ -1.15
CPS1-207ENST00000479988 MRS2Q9HD23 443 aa7.89□□□□□ -1.15
CPS1-207ENST00000479988 TNRQ92752 1358 aa7.89□□□□□ -1.15
CPS1-207ENST00000479988 UHRF1BP1Q6BDS2 1440 aa7.89□□□□□ -1.15
CPS1-207ENST00000479988 AMPHP49418 695 aa7.88□□□□□ -1.15
CPS1-207ENST00000479988 MINK1Q8N4C8 1332 aaPredicted RBP7.88□□□□□ -1.15
CPS1-207ENST00000479988 MAPK8IP3Q9UPT6 1336 aa7.88□□□□□ -1.15
CPS1-207ENST00000479988 NUP153P49790 1475 aaKnown RBP7.88□□□□□ -1.15
CPS1-207ENST00000479988 ABCC5O15440 1437 aa7.88□□□□□ -1.15
CPS1-207ENST00000479988 TNNT2P45379 298 aaPredicted RBP7.87□□□□□ -1.15
CPS1-207ENST00000479988 CNTLNQ9NXG0 1405 aa7.87□□□□□ -1.15
CPS1-207ENST00000479988 DISP1Q96F81 1524 aa7.87□□□□□ -1.15
CPS1-207ENST00000479988 PNNQ9H307 717 aaKnown RBP7.87□□□□□ -1.15
CPS1-207ENST00000479988 FAM135AQ9P2D6 1515 aa7.87□□□□□ -1.15
CPS1-207ENST00000479988 PTPRKQ15262 1439 aa7.86□□□□□ -1.15
CPS1-207ENST00000479988 EVC2Q86UK5 1308 aa7.86□□□□□ -1.15
CPS1-207ENST00000479988 CADPS2Q86UW7 1296 aa7.86□□□□□ -1.15
CPS1-207ENST00000479988 ABCC10Q5T3U5 1492 aa7.86□□□□□ -1.15
CPS1-207ENST00000479988 KIAA1107Q9UPP5 1409 aa7.85□□□□□ -1.15
CPS1-207ENST00000479988 CHD1O14646 1710 aa7.85□□□□□ -1.15
CPS1-207ENST00000479988 U2SURPO15042 1029 aaKnown RBP7.85□□□□□ -1.15
CPS1-207ENST00000479988 FKBP8Q14318 412 aa7.85□□□□□ -1.15
CPS1-207ENST00000479988 MORC1Q86VD1 984 aa7.85□□□□□ -1.15
CPS1-207ENST00000479988 TMX4Q9H1E5 349 aaPredicted RBP7.85□□□□□ -1.15
CPS1-207ENST00000479988 NCOA1Q15788 1441 aa7.85□□□□□ -1.15
CPS1-207ENST00000479988 MSH5O43196 834 aa7.85□□□□□ -1.15
CPS1-207ENST00000479988 LMTK3Q96Q04 1460 aa7.85□□□□□ -1.15
CPS1-207ENST00000479988 ITSN2Q9NZM3 1697 aa7.84□□□□□ -1.15
CPS1-207ENST00000479988 CAMSAP2Q08AD1 1489 aa7.84□□□□□ -1.15
CPS1-207ENST00000479988 MSH6P52701 1360 aa7.84□□□□□ -1.15
CPS1-207ENST00000479988 DHX29Q7Z478 1369 aaKnown RBP7.84□□□□□ -1.15
CPS1-207ENST00000479988 ANKRD30BQ9BXX2 1392 aa7.84□□□□□ -1.15
CPS1-207ENST00000479988 FBXO31Q5XUX0 539 aaPredicted RBP7.84□□□□□ -1.15
CPS1-207ENST00000479988 GPATCH8Q9UKJ3 1502 aaKnown RBP7.84□□□□□ -1.15
CPS1-207ENST00000479988 BCL11AQ9H165 835 aa7.84□□□□□ -1.15
CPS1-207ENST00000479988 FAM9BQ8IZU0 186 aa7.84□□□□□ -1.15
CPS1-207ENST00000479988 LTV1Q96GA3 475 aaPredicted RBP7.84□□□□□ -1.15
CPS1-207ENST00000479988 NEO1Q92859 1461 aa7.84□□□□□ -1.15
CPS1-207ENST00000479988 ERICH6BQ5W0A0 696 aa7.83□□□□□ -1.16
CPS1-207ENST00000479988 RTF1Q92541 710 aaKnown RBP7.83□□□□□ -1.16
CPS1-207ENST00000479988 RPGRIP1LQ68CZ1 1315 aa7.83□□□□□ -1.16
CPS1-207ENST00000479988 PLCB2Q00722 1185 aa7.83□□□□□ -1.16
CPS1-207ENST00000479988 NGLY1Q96IV0 654 aa7.83□□□□□ -1.16
CPS1-207ENST00000479988 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.82□□□□□ -1.16
CPS1-207ENST00000479988 COG3Q96JB2 828 aa7.82□□□□□ -1.16
CPS1-207ENST00000479988 A2MP01023 1474 aa7.82□□□□□ -1.16
CPS1-207ENST00000479988 ATP10AO60312 1499 aa7.82□□□□□ -1.16
CPS1-207ENST00000479988 RPRD2Q5VT52 1461 aaKnown RBP7.82□□□□□ -1.16
CPS1-207ENST00000479988 CCDC7Q96M83 1385 aa7.81□□□□□ -1.16
CPS1-207ENST00000479988 HMGB2P26583 209 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms