RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 DCAF11Q8TEB1 546 aa33.41■■■□□ 2.94
SYNGAP1-206ENST00000479510 CCDC144AA2RUR9 1427 aa33.4■■■□□ 2.94
SYNGAP1-206ENST00000479510 SYCP2Q9BX26 1530 aa33.4■■■□□ 2.94
SYNGAP1-206ENST00000479510 PNISRQ8TF01 805 aaKnown RBP33.4■■■□□ 2.94
SYNGAP1-206ENST00000479510 POLR3GLQ9BT43 218 aa33.4■■■□□ 2.94
SYNGAP1-206ENST00000479510 PRAG1Q86YV5 1406 aa33.39■■■□□ 2.94
SYNGAP1-206ENST00000479510 RALBP1Q15311 655 aa33.39■■■□□ 2.94
SYNGAP1-206ENST00000479510 NUDCQ9Y266 331 aa33.39■■■□□ 2.94
SYNGAP1-206ENST00000479510 BRD4O60885 1362 aaPredicted RBP33.39■■■□□ 2.94
SYNGAP1-206ENST00000479510 ARHGAP5Q13017 1502 aa33.38■■■□□ 2.93
SYNGAP1-206ENST00000479510 TRPM1Q7Z4N2 1603 aa33.38■■■□□ 2.93
SYNGAP1-206ENST00000479510 ST20-MTHFSA0A0A6YYL1 179 aa33.38■■■□□ 2.93
SYNGAP1-206ENST00000479510 RNF123Q5XPI4 1314 aa33.38■■■□□ 2.93
SYNGAP1-206ENST00000479510 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.38■■■□□ 2.937e-8■□□□□ 9
SYNGAP1-206ENST00000479510 LAMC1P11047 1609 aa33.37■■■□□ 2.93
SYNGAP1-206ENST00000479510 TTC37Q6PGP7 1564 aa33.37■■■□□ 2.93
SYNGAP1-206ENST00000479510 CHD1O14646 1710 aa33.37■■■□□ 2.93
SYNGAP1-206ENST00000479510 IQGAP3Q86VI3 1631 aa33.36■■■□□ 2.93
SYNGAP1-206ENST00000479510 ABCC2Q92887 1545 aa33.36■■■□□ 2.93
SYNGAP1-206ENST00000479510 GPRASP1Q5JY77 1395 aa33.35■■■□□ 2.93
SYNGAP1-206ENST00000479510 KDM2AQ9Y2K7 1162 aa33.35■■■□□ 2.93
SYNGAP1-206ENST00000479510 LRPPRCP42704 1394 aaKnown RBP33.34■■■□□ 2.93
SYNGAP1-206ENST00000479510 TMC1Q8TDI8 760 aa33.33■■■□□ 2.93
SYNGAP1-206ENST00000479510 MYO5CQ9NQX4 1742 aa33.33■■■□□ 2.93
SYNGAP1-206ENST00000479510 MYBBP1AQ9BQG0 1328 aaKnown RBP33.33■■■□□ 2.93
SYNGAP1-206ENST00000479510 ATP10AO60312 1499 aa33.32■■■□□ 2.92
SYNGAP1-206ENST00000479510 DUOX2Q9NRD8 1548 aa33.3■■■□□ 2.92
SYNGAP1-206ENST00000479510 PLA2R1Q13018 1463 aa33.3■■■□□ 2.92
SYNGAP1-206ENST00000479510 MAGI2Q86UL8 1455 aa33.29■■■□□ 2.92
SYNGAP1-206ENST00000479510 ERBINQ96RT1 1412 aa33.27■■■□□ 2.92
SYNGAP1-206ENST00000479510 EIF2AK4Q9P2K8 1649 aaKnown RBP33.27■■■□□ 2.92
SYNGAP1-206ENST00000479510 A2MP01023 1474 aa33.23■■■□□ 2.91
SYNGAP1-206ENST00000479510 PRDM15P57071 1507 aaPredicted RBP33.22■■■□□ 2.91
SYNGAP1-206ENST00000479510 WASHC2CQ9Y4E1 1318 aa33.21■■■□□ 2.91
SYNGAP1-206ENST00000479510 B4GALNT3Q6L9W6 998 aa33.2■■■□□ 2.91
SYNGAP1-206ENST00000479510 PARD3Q8TEW0 1356 aa33.19■■■□□ 2.9
SYNGAP1-206ENST00000479510 COL17A1Q9UMD9 1497 aaPredicted RBP33.18■■■□□ 2.9
SYNGAP1-206ENST00000479510 PLCH2O75038 1416 aa33.18■■■□□ 2.9
SYNGAP1-206ENST00000479510 UHRF1BP1LA0JNW5 1464 aa33.16■■■□□ 2.9
SYNGAP1-206ENST00000479510 INSRP06213 1382 aa33.15■■■□□ 2.9
SYNGAP1-206ENST00000479510 NLRP13Q86W25 1043 aa33.15■■■□□ 2.9
SYNGAP1-206ENST00000479510 ZMYM4Q5VZL5 1548 aa33.13■■■□□ 2.89
SYNGAP1-206ENST00000479510 CNGB1Q14028 1251 aaPredicted RBP33.11■■■□□ 2.89
SYNGAP1-206ENST00000479510 MSH5O43196 834 aa33.1■■■□□ 2.89
SYNGAP1-206ENST00000479510 ABCC1P33527 1531 aa33.09■■■□□ 2.89
SYNGAP1-206ENST00000479510 EFCAB2Q5VUJ9 269 aa33.09■■■□□ 2.89
SYNGAP1-206ENST00000479510 PER1O15534 1290 aaPredicted RBP33.08■■■□□ 2.89
SYNGAP1-206ENST00000479510 ERCC6L2Q5T890 1561 aa33.08■■■□□ 2.89
SYNGAP1-206ENST00000479510 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.08■■■□□ 2.891e-6■■■■□ 21.3
SYNGAP1-206ENST00000479510 NBPF1Q3BBV0 1214 aa33.07■■■□□ 2.88
SYNGAP1-206ENST00000479510 PDE3BQ13370 1112 aa33.06■■■□□ 2.88
SYNGAP1-206ENST00000479510 RGL3Q3MIN7 710 aa33.06■■■□□ 2.88
SYNGAP1-206ENST00000479510 TESK2Q96S53 571 aa33.06■■■□□ 2.88
SYNGAP1-206ENST00000479510 RNF17Q9BXT8 1623 aaKnown RBP33.06■■■□□ 2.88
SYNGAP1-206ENST00000479510 ARAP3Q8WWN8 1544 aa33.06■■■□□ 2.88
SYNGAP1-206ENST00000479510 ZCCHC11Q5TAX3 1644 aaKnown RBP33.05■■■□□ 2.88
SYNGAP1-206ENST00000479510 RTEL1-TNFRSF6BF6WH68 1400 aa33.02■■■□□ 2.88
SYNGAP1-206ENST00000479510 STAC3Q96MF2 364 aa33.01■■■□□ 2.87
SYNGAP1-206ENST00000479510 CLASP1Q7Z460 1538 aa33■■■□□ 2.87
SYNGAP1-206ENST00000479510 CCDC136Q96JN2 1154 aa32.99■■■□□ 2.87
SYNGAP1-206ENST00000479510 TMF1P82094 1093 aa32.98■■■□□ 2.87
SYNGAP1-206ENST00000479510 DISP3Q9P2K9 1392 aa32.98■■■□□ 2.87
SYNGAP1-206ENST00000479510 TRAPPC8Q9Y2L5 1435 aa32.93■■■□□ 2.86
SYNGAP1-206ENST00000479510 TRPM2O94759 1503 aa32.92■■■□□ 2.86
SYNGAP1-206ENST00000479510 BLMP54132 1417 aaPredicted RBP32.91■■■□□ 2.86
SYNGAP1-206ENST00000479510 MADDQ8WXG6 1647 aa32.9■■■□□ 2.86
SYNGAP1-206ENST00000479510 ERICH6Q7L0X2 663 aa32.9■■■□□ 2.86
SYNGAP1-206ENST00000479510 RRP1P56182 461 aaKnown RBP32.89■■■□□ 2.86
SYNGAP1-206ENST00000479510 PTPRTO14522 1441 aa32.89■■■□□ 2.86
SYNGAP1-206ENST00000479510 DEPDC5O75140 1603 aa32.88■■■□□ 2.85
SYNGAP1-206ENST00000479510 ZFYVE16Q7Z3T8 1539 aa32.87■■■□□ 2.85
SYNGAP1-206ENST00000479510 PANK3Q9H999 370 aa32.87■■■□□ 2.85
SYNGAP1-206ENST00000479510 SPAG9O60271 1321 aaKnown RBP32.86■■■□□ 2.85
SYNGAP1-206ENST00000479510 IQGAP1P46940 1657 aa32.86■■■□□ 2.85
SYNGAP1-206ENST00000479510 SCAPERQ9BY12 1400 aa32.86■■■□□ 2.85
SYNGAP1-206ENST00000479510 RCAN3Q9UKA8 241 aa32.86■■■□□ 2.85
SYNGAP1-206ENST00000479510 CEP152O94986 1710 aa32.84■■■□□ 2.85
SYNGAP1-206ENST00000479510 SPHKAPQ2M3C7 1700 aa32.84■■■□□ 2.85
SYNGAP1-206ENST00000479510 NEURL4Q96JN8 1562 aa32.84■■■□□ 2.85
SYNGAP1-206ENST00000479510 TET3O43151 1660 aa32.81■■■□□ 2.84
SYNGAP1-206ENST00000479510 CDCA8Q53HL2 280 aa32.81■■■□□ 2.84
SYNGAP1-206ENST00000479510 WDR7Q9Y4E6 1490 aa32.79■■■□□ 2.84
SYNGAP1-206ENST00000479510 SCAF11Q99590 1463 aaKnown RBP32.78■■■□□ 2.84
SYNGAP1-206ENST00000479510 VWDEQ8N2E2 1590 aa32.77■■■□□ 2.84
SYNGAP1-206ENST00000479510 CC2D1BQ5T0F9 858 aaKnown RBP32.76■■■□□ 2.84
SYNGAP1-206ENST00000479510 SYNMO15061 1565 aa32.76■■■□□ 2.83
SYNGAP1-206ENST00000479510 KIAA1210Q9ULL0 1709 aa32.75■■■□□ 2.83
SYNGAP1-206ENST00000479510 INO80Q9ULG1 1556 aaPredicted RBP32.75■■■□□ 2.83
SYNGAP1-206ENST00000479510 KANK1Q14678 1352 aa32.73■■■□□ 2.83
SYNGAP1-206ENST00000479510 MYT1LQ9UL68 1186 aa32.73■■■□□ 2.83
SYNGAP1-206ENST00000479510 CLTCL1P53675 1640 aa32.73■■■□□ 2.83
SYNGAP1-206ENST00000479510 ABCA9Q8IUA7 1624 aa32.72■■■□□ 2.83
SYNGAP1-206ENST00000479510 ATP7AQ04656 1500 aa32.71■■■□□ 2.83
SYNGAP1-206ENST00000479510 SENP3-EIF4A1A0A087X0R7 540 aa32.71■■■□□ 2.83
SYNGAP1-206ENST00000479510 SLC24A1O60721 1099 aa32.69■■■□□ 2.82
SYNGAP1-206ENST00000479510 EIF3AQ14152 1382 aaKnown RBP32.69■■■□□ 2.82
SYNGAP1-206ENST00000479510 NPC1L1Q9UHC9 1359 aa32.69■■■□□ 2.82
SYNGAP1-206ENST00000479510 AFAP1Q8N556 730 aa32.68■■■□□ 2.82
SYNGAP1-206ENST00000479510 KNSTRNQ9Y448 316 aa32.67■■■□□ 2.82
SYNGAP1-206ENST00000479510 EXOC6Q8TAG9 804 aa32.65■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms