RNA–Protein interactions for RNA: ENST00000479234.1

SCAF8-206, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 281 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-206ENST00000479234 KIF3CO14782 793 aa9.29□□□□□ -0.92
SCAF8-206ENST00000479234 ANKRD13DQ6ZTN6 518 aa9.29□□□□□ -0.92
SCAF8-206ENST00000479234 BCL11BQ9C0K0 894 aaPredicted RBP9.29□□□□□ -0.92
SCAF8-206ENST00000479234 DHX57Q6P158 1386 aaKnown RBP9.28□□□□□ -0.92
SCAF8-206ENST00000479234 KHSRPQ92945 711 aaKnown RBP eCLIP9.28□□□□□ -0.92
SCAF8-206ENST00000479234 NESP48681 1621 aa9.27□□□□□ -0.92
SCAF8-206ENST00000479234 AQRO60306 1485 aaKnown RBP eCLIP9.27□□□□□ -0.93
SCAF8-206ENST00000479234 CUL7Q14999 1698 aa9.26□□□□□ -0.93
SCAF8-206ENST00000479234 TIAM1Q13009 1591 aa9.26□□□□□ -0.93
SCAF8-206ENST00000479234 MFRPQ9BY79 579 aa9.26□□□□□ -0.93
SCAF8-206ENST00000479234 LRRC9Q6ZRR7 1453 aa9.26□□□□□ -0.93
SCAF8-206ENST00000479234 EFCAB5A4FU69 1503 aa9.26□□□□□ -0.93
SCAF8-206ENST00000479234 C2orf72A6NCS6 295 aa9.25□□□□□ -0.93
SCAF8-206ENST00000479234 CENPBP07199 599 aaPredicted RBP9.25□□□□□ -0.93
SCAF8-206ENST00000479234 STK24Q9Y6E0 443 aa9.25□□□□□ -0.93
SCAF8-206ENST00000479234 ACIN1Q9UKV3 1341 aaKnown RBP9.25□□□□□ -0.93
SCAF8-206ENST00000479234 URB2Q14146 1524 aaKnown RBP9.25□□□□□ -0.93
SCAF8-206ENST00000479234 SLC34A2O95436 690 aa9.24□□□□□ -0.93
SCAF8-206ENST00000479234 PKD2Q13563 968 aa9.24□□□□□ -0.93
SCAF8-206ENST00000479234 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.24□□□□□ -0.93
SCAF8-206ENST00000479234 CASKIN1Q8WXD9 1431 aa9.23□□□□□ -0.93
SCAF8-206ENST00000479234 NUDT7P0C024 238 aa9.23□□□□□ -0.93
SCAF8-206ENST00000479234 FMN1Q68DA7 1419 aa9.22□□□□□ -0.93
SCAF8-206ENST00000479234 GAPVD1Q14C86 1478 aa9.21□□□□□ -0.93
SCAF8-206ENST00000479234 FYCO1Q9BQS8 1478 aa9.21□□□□□ -0.93
SCAF8-206ENST00000479234 STK25O00506 426 aa9.21□□□□□ -0.94
SCAF8-206ENST00000479234 P3H3Q8IVL6 736 aa9.21□□□□□ -0.94
SCAF8-206ENST00000479234 PCDHGA4Q9Y5G9 962 aa9.2□□□□□ -0.94
SCAF8-206ENST00000479234 SETD5Q9C0A6 1442 aa9.2□□□□□ -0.94
SCAF8-206ENST00000479234 ECM2O94769 699 aaPredicted RBP9.19□□□□□ -0.94
SCAF8-206ENST00000479234 LHX6Q9UPM6 363 aa9.19□□□□□ -0.94
SCAF8-206ENST00000479234 PHLDB1Q86UU1 1377 aa9.19□□□□□ -0.94
SCAF8-206ENST00000479234 TDRD9Q8NDG6 1382 aaKnown RBP9.19□□□□□ -0.94
SCAF8-206ENST00000479234 FHOD3Q2V2M9 1422 aa9.19□□□□□ -0.94
SCAF8-206ENST00000479234 WDR97A6NE52 1622 aa9.19□□□□□ -0.94
SCAF8-206ENST00000479234 PSDA5PKW4 1024 aaPredicted RBP9.18□□□□□ -0.94
SCAF8-206ENST00000479234 POTEEQ6S8J3 1075 aa9.18□□□□□ -0.94
SCAF8-206ENST00000479234 ABCA5Q8WWZ7 1642 aa9.18□□□□□ -0.94
SCAF8-206ENST00000479234 RAB3GAP2Q9H2M9 1393 aa9.18□□□□□ -0.94
SCAF8-206ENST00000479234 ATP1B4Q9UN42 357 aaPredicted RBP9.18□□□□□ -0.94
SCAF8-206ENST00000479234 CFAP43Q8NDM7 1665 aa9.17□□□□□ -0.94
SCAF8-206ENST00000479234 TMC2Q8TDI7 906 aa9.17□□□□□ -0.94
SCAF8-206ENST00000479234 TIMELESSQ9UNS1 1208 aa9.17□□□□□ -0.94
SCAF8-206ENST00000479234 PCF11O94913 1555 aaKnown RBP9.16□□□□□ -0.94
SCAF8-206ENST00000479234 ITGAEP38570 1179 aa9.16□□□□□ -0.94
SCAF8-206ENST00000479234 NEUROD1Q13562 356 aa9.16□□□□□ -0.94
SCAF8-206ENST00000479234 CTTNBP2Q8WZ74 1663 aa9.16□□□□□ -0.94
SCAF8-206ENST00000479234 FAM50AQ14320 339 aaKnown RBP9.15□□□□□ -0.94
SCAF8-206ENST00000479234 HCSTQ9UBK5 93 aa9.15□□□□□ -0.94
SCAF8-206ENST00000479234 AXIN2Q9Y2T1 843 aa9.14□□□□□ -0.95
SCAF8-206ENST00000479234 TARBP1Q13395 1621 aaKnown RBP9.13□□□□□ -0.95
SCAF8-206ENST00000479234 SAMD9Q5K651 1589 aa9.13□□□□□ -0.95
SCAF8-206ENST00000479234 ADGRD1Q6QNK2 874 aa9.13□□□□□ -0.95
SCAF8-206ENST00000479234 PLA2G2EQ9NZK7 142 aa9.13□□□□□ -0.95
SCAF8-206ENST00000479234 SNAPC4Q5SXM2 1469 aa9.13□□□□□ -0.95
SCAF8-206ENST00000479234 ARHGAP33O14559 1287 aa9.12□□□□□ -0.95
SCAF8-206ENST00000479234 MRC2Q9UBG0 1479 aa9.12□□□□□ -0.95
SCAF8-206ENST00000479234 THOC2Q8NI27 1593 aaKnown RBP9.12□□□□□ -0.95
SCAF8-206ENST00000479234 MTUS2Q5JR59 1369 aa9.12□□□□□ -0.95
SCAF8-206ENST00000479234 GRIN2BQ13224 1484 aa9.11□□□□□ -0.95
SCAF8-206ENST00000479234 TK2O00142 265 aa9.1□□□□□ -0.95
SCAF8-206ENST00000479234 FGD6Q6ZV73 1430 aa9.1□□□□□ -0.95
SCAF8-206ENST00000479234 KIF21AQ7Z4S6 1674 aa9.1□□□□□ -0.95
SCAF8-206ENST00000479234 KDM4FA0A1W2PPD8 638 aa9.09□□□□□ -0.95
SCAF8-206ENST00000479234 MAPKBP1O60336 1514 aa9.09□□□□□ -0.95
SCAF8-206ENST00000479234 IFT140Q96RY7 1462 aa9.08□□□□□ -0.96
SCAF8-206ENST00000479234 RGL2O15211 777 aa9.08□□□□□ -0.96
SCAF8-206ENST00000479234 PTCD2Q8WV60 388 aaKnown RBP9.08□□□□□ -0.96
SCAF8-206ENST00000479234 CCDC18Q5T9S5 1454 aa9.08□□□□□ -0.96
SCAF8-206ENST00000479234 GTF3C3Q9Y5Q9 886 aa9.07□□□□□ -0.96
SCAF8-206ENST00000479234 MYOM3Q5VTT5 1437 aa9.06□□□□□ -0.96
SCAF8-206ENST00000479234 EHBP1L1Q8N3D4 1523 aa9.06□□□□□ -0.96
SCAF8-206ENST00000479234 HRO43593 1189 aa9.06□□□□□ -0.96
SCAF8-206ENST00000479234 NCOA2Q15596 1464 aa9.06□□□□□ -0.96
SCAF8-206ENST00000479234 PPP1R15AO75807 674 aaPredicted RBP9.05□□□□□ -0.96
SCAF8-206ENST00000479234 ARHGEF11O15085 1522 aa9.05□□□□□ -0.96
SCAF8-206ENST00000479234 UGGT2Q9NYU1 1516 aa9.05□□□□□ -0.96
SCAF8-206ENST00000479234 HFM1A2PYH4 1435 aa9.05□□□□□ -0.96
SCAF8-206ENST00000479234 ADAMTS12P58397 1594 aa9.04□□□□□ -0.96
SCAF8-206ENST00000479234 FOXK1P85037 733 aa9.04□□□□□ -0.96
SCAF8-206ENST00000479234 SIN3AQ96ST3 1273 aa9.04□□□□□ -0.96
SCAF8-206ENST00000479234 IQGAP2Q13576 1575 aa9.03□□□□□ -0.96
SCAF8-206ENST00000479234 PPP1R37O75864 691 aa9.03□□□□□ -0.96
SCAF8-206ENST00000479234 PPP4R3BQ5MIZ7 849 aa9.03□□□□□ -0.96
SCAF8-206ENST00000479234 WDR62O43379 1518 aa9.03□□□□□ -0.96
SCAF8-206ENST00000479234 KIAA0586Q9BVV6 1533 aa9.03□□□□□ -0.96
SCAF8-206ENST00000479234 MIA2Q96PC5 1412 aa9.03□□□□□ -0.96
SCAF8-206ENST00000479234 UACAQ9BZF9 1416 aa9.03□□□□□ -0.96
SCAF8-206ENST00000479234 PBRM1Q86U86 1689 aa9.03□□□□□ -0.96
SCAF8-206ENST00000479234 SUPT6HQ7KZ85 1726 aaKnown RBP9.02□□□□□ -0.96
SCAF8-206ENST00000479234 TCOF1Q13428 1488 aaKnown RBP9.02□□□□□ -0.96
SCAF8-206ENST00000479234 DMRTA1Q5VZB9 504 aa9.02□□□□□ -0.97
SCAF8-206ENST00000479234 PTPRKQ15262 1439 aa9.02□□□□□ -0.97
SCAF8-206ENST00000479234 HECW1Q76N89 1606 aa9.02□□□□□ -0.97
SCAF8-206ENST00000479234 EPRSP07814 1512 aaKnown RBP9□□□□□ -0.97
SCAF8-206ENST00000479234 NAIPQ13075 1403 aa9□□□□□ -0.97
SCAF8-206ENST00000479234 PSEN2P49810 448 aa9□□□□□ -0.97
SCAF8-206ENST00000479234 PLPP6Q8IY26 295 aa9□□□□□ -0.97
SCAF8-206ENST00000479234 YTHDC1Q96MU7 727 aaKnown RBP9□□□□□ -0.97
SCAF8-206ENST00000479234 AKNAQ7Z591 1439 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms