RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 GTPBP6O43824 516 aaPredicted RBP10.81□□□□□ -0.68
LINC00173-202ENST00000477702 TMEM106CQ9BVX2 250 aa10.81□□□□□ -0.68
LINC00173-202ENST00000477702 EFCAB3Q8N7B9 438 aa10.79□□□□□ -0.68
LINC00173-202ENST00000477702 BMP2KQ9NSY1 1161 aaPredicted RBP10.78□□□□□ -0.68
LINC00173-202ENST00000477702 GABBR2O75899 941 aa10.77□□□□□ -0.69
LINC00173-202ENST00000477702 TTLL13PA6NNM8 815 aa10.76□□□□□ -0.69
LINC00173-202ENST00000477702 MLECQ14165 292 aa10.76□□□□□ -0.69
LINC00173-202ENST00000477702 TSHZ2Q9NRE2 1034 aa10.76□□□□□ -0.69
LINC00173-202ENST00000477702 ABCA8O94911 1581 aa10.76□□□□□ -0.69
LINC00173-202ENST00000477702 FRMPD1Q5SYB0 1578 aa10.75□□□□□ -0.69
LINC00173-202ENST00000477702 MFRPQ9BY79 579 aa10.75□□□□□ -0.69
LINC00173-202ENST00000477702 PHLDB1Q86UU1 1377 aa10.75□□□□□ -0.69
LINC00173-202ENST00000477702 TIE1P35590 1138 aa10.73□□□□□ -0.69
LINC00173-202ENST00000477702 PHF8Q9UPP1 1060 aa10.72□□□□□ -0.69
LINC00173-202ENST00000477702 NEO1Q92859 1461 aa10.72□□□□□ -0.69
LINC00173-202ENST00000477702 RAPGEF2Q9Y4G8 1499 aa10.72□□□□□ -0.69
LINC00173-202ENST00000477702 ARHGEF40Q8TER5 1519 aa10.71□□□□□ -0.69
LINC00173-202ENST00000477702 YEATS2Q9ULM3 1422 aa10.71□□□□□ -0.69
LINC00173-202ENST00000477702 ABCA9Q8IUA7 1624 aa10.7□□□□□ -0.7
LINC00173-202ENST00000477702 POGZQ7Z3K3 1410 aa10.7□□□□□ -0.7
LINC00173-202ENST00000477702 CEBPAP49715 358 aaPredicted RBP10.7□□□□□ -0.7
LINC00173-202ENST00000477702 ATP10BO94823 1461 aa10.69□□□□□ -0.7
LINC00173-202ENST00000477702 ATN1P54259 1190 aaPredicted RBP10.69□□□□□ -0.7
LINC00173-202ENST00000477702 TRIM35Q9UPQ4 493 aa10.69□□□□□ -0.7
LINC00173-202ENST00000477702 FANCAO15360 1455 aa10.68□□□□□ -0.7
LINC00173-202ENST00000477702 SIGLEC1Q9BZZ2 1709 aa10.68□□□□□ -0.7
LINC00173-202ENST00000477702 ATMINO43313 823 aaPredicted RBP10.68□□□□□ -0.7
LINC00173-202ENST00000477702 CLCN6P51797 869 aa10.68□□□□□ -0.7
LINC00173-202ENST00000477702 P3H3Q8IVL6 736 aa10.68□□□□□ -0.7
LINC00173-202ENST00000477702 FBXO22Q8NEZ5 403 aa10.68□□□□□ -0.7
LINC00173-202ENST00000477702 DENND4BO75064 1496 aaPredicted RBP10.68□□□□□ -0.7
LINC00173-202ENST00000477702 GOLGA3Q08378 1498 aa10.68□□□□□ -0.7
LINC00173-202ENST00000477702 GOLGA2Q08379 1002 aa10.67□□□□□ -0.7
LINC00173-202ENST00000477702 STRCQ7RTU9 1775 aa10.67□□□□□ -0.7
LINC00173-202ENST00000477702 AKNAQ7Z591 1439 aa10.67□□□□□ -0.7
LINC00173-202ENST00000477702 SOX12O15370 315 aa10.66□□□□□ -0.7
LINC00173-202ENST00000477702 PPP1R37O75864 691 aa10.66□□□□□ -0.7
LINC00173-202ENST00000477702 KDM2AQ9Y2K7 1162 aa10.66□□□□□ -0.7
LINC00173-202ENST00000477702 SP7Q8TDD2 431 aaPredicted RBP10.65□□□□□ -0.7
LINC00173-202ENST00000477702 MS4A4AQ96JQ5 239 aa10.65□□□□□ -0.7
LINC00173-202ENST00000477702 FER1L4A9Z1Z3 1794 aa10.65□□□□□ -0.71
LINC00173-202ENST00000477702 TTC37Q6PGP7 1564 aa10.65□□□□□ -0.71
LINC00173-202ENST00000477702 PREX1Q8TCU6 1659 aa10.64□□□□□ -0.71
LINC00173-202ENST00000477702 MKRN3Q13064 507 aaKnown RBP10.64□□□□□ -0.71
LINC00173-202ENST00000477702 RICTORQ6R327 1708 aa10.64□□□□□ -0.71
LINC00173-202ENST00000477702 ZFYVE16Q7Z3T8 1539 aa10.63□□□□□ -0.71
LINC00173-202ENST00000477702 NLRP6P59044 892 aa10.63□□□□□ -0.71
LINC00173-202ENST00000477702 ASTLQ6HA08 431 aaPredicted RBP10.63□□□□□ -0.71
LINC00173-202ENST00000477702 PELP1Q8IZL8 1130 aaKnown RBP10.63□□□□□ -0.71
LINC00173-202ENST00000477702 FHOD3Q2V2M9 1422 aa10.63□□□□□ -0.71
LINC00173-202ENST00000477702 UBAP1LF5GYI3 381 aa10.62□□□□□ -0.71
LINC00173-202ENST00000477702 FAM9AQ8IZU1 332 aaPredicted RBP10.62□□□□□ -0.71
LINC00173-202ENST00000477702 LTBP4Q8N2S1 1624 aa10.62□□□□□ -0.71
LINC00173-202ENST00000477702 PTPRTO14522 1441 aa10.61□□□□□ -0.71
LINC00173-202ENST00000477702 UHRF1BP1Q6BDS2 1440 aa10.61□□□□□ -0.71
LINC00173-202ENST00000477702 CTTNBP2Q8WZ74 1663 aa10.61□□□□□ -0.71
LINC00173-202ENST00000477702 RYDENQ9NUL5 291 aaKnown RBP10.61□□□□□ -0.71
LINC00173-202ENST00000477702 POTEIP0CG38 1075 aa10.6□□□□□ -0.71
LINC00173-202ENST00000477702 EFCAB5A4FU69 1503 aa10.59□□□□□ -0.71
LINC00173-202ENST00000477702 ARHGEF12Q9NZN5 1544 aa10.59□□□□□ -0.71
LINC00173-202ENST00000477702 VSIG10Q8N0Z9 540 aa10.59□□□□□ -0.71
LINC00173-202ENST00000477702 DCBLD2Q96PD2 775 aa10.59□□□□□ -0.71
LINC00173-202ENST00000477702 ZMYM4Q5VZL5 1548 aa10.58□□□□□ -0.72
LINC00173-202ENST00000477702 CADPS2Q86UW7 1296 aa10.58□□□□□ -0.72
LINC00173-202ENST00000477702 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.58□□□□□ -0.72
LINC00173-202ENST00000477702 IQSEC2Q5JU85 1478 aa10.57□□□□□ -0.72
LINC00173-202ENST00000477702 DPY19L2Q6NUT2 758 aa10.57□□□□□ -0.72
LINC00173-202ENST00000477702 HECW1Q76N89 1606 aa10.57□□□□□ -0.72
LINC00173-202ENST00000477702 MAGI2Q86UL8 1455 aa10.55□□□□□ -0.72
LINC00173-202ENST00000477702 ZNF335Q9H4Z2 1342 aaPredicted RBP10.55□□□□□ -0.72
LINC00173-202ENST00000477702 ATP10AO60312 1499 aa10.55□□□□□ -0.72
LINC00173-202ENST00000477702 PLEKHD1A6NEE1 506 aa10.54□□□□□ -0.72
LINC00173-202ENST00000477702 HSPA1LP34931 641 aa10.54□□□□□ -0.72
LINC00173-202ENST00000477702 MED1Q15648 1581 aaPredicted RBP10.54□□□□□ -0.72
LINC00173-202ENST00000477702 RAPGEF6Q8TEU7 1601 aa10.54□□□□□ -0.72
LINC00173-202ENST00000477702 CFAP74Q9C0B2 1584 aa10.53□□□□□ -0.72
LINC00173-202ENST00000477702 C9orf84Q5VXU9 1444 aa10.53□□□□□ -0.72
LINC00173-202ENST00000477702 SCAPERQ9BY12 1400 aa10.53□□□□□ -0.72
LINC00173-202ENST00000477702 IRX5P78411 483 aaPredicted RBP10.53□□□□□ -0.72
LINC00173-202ENST00000477702 PDCD7Q8N8D1 485 aaKnown RBP10.53□□□□□ -0.72
LINC00173-202ENST00000477702 NUP153P49790 1475 aaKnown RBP10.53□□□□□ -0.72
LINC00173-202ENST00000477702 SETD1BQ9UPS6 1966 aaKnown RBP10.52□□□□□ -0.72
LINC00173-202ENST00000477702 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.52□□□□□ -0.73
LINC00173-202ENST00000477702 NCOA1Q15788 1441 aa10.51□□□□□ -0.73
LINC00173-202ENST00000477702 RANGAP1P46060 587 aaPredicted RBP10.51□□□□□ -0.73
LINC00173-202ENST00000477702 PIP4K2BP78356 416 aa10.51□□□□□ -0.73
LINC00173-202ENST00000477702 COLQQ9Y215 455 aaPredicted RBP10.51□□□□□ -0.73
LINC00173-202ENST00000477702 NCKAP5LQ9HCH0 1330 aa10.51□□□□□ -0.73
LINC00173-202ENST00000477702 POTEFA5A3E0 1075 aa10.49□□□□□ -0.73
LINC00173-202ENST00000477702 IER5LQ5T953 404 aa10.49□□□□□ -0.73
LINC00173-202ENST00000477702 MYT1LQ9UL68 1186 aa10.49□□□□□ -0.73
LINC00173-202ENST00000477702 ESF1Q9H501 851 aaKnown RBP10.48□□□□□ -0.73
LINC00173-202ENST00000477702 OCEL1Q9H607 264 aa10.48□□□□□ -0.73
LINC00173-202ENST00000477702 TRAPPC8Q9Y2L5 1435 aa10.48□□□□□ -0.73
LINC00173-202ENST00000477702 C3P01024 1663 aa10.47□□□□□ -0.73
LINC00173-202ENST00000477702 PRXQ9BXM0 1461 aa10.47□□□□□ -0.73
LINC00173-202ENST00000477702 AFAP1Q8N556 730 aa10.46□□□□□ -0.73
LINC00173-202ENST00000477702 CAMSAP1Q5T5Y3 1602 aa10.46□□□□□ -0.74
LINC00173-202ENST00000477702 SAMD9Q5K651 1589 aa10.45□□□□□ -0.74
LINC00173-202ENST00000477702 PLCG2P16885 1265 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms