RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-208ENST00000477289 ANKK1Q8NFD2 765 aa9.64□□□□□ -0.87
NSMCE4A-208ENST00000477289 BBXQ8WY36 941 aaPredicted RBP9.63□□□□□ -0.87
NSMCE4A-208ENST00000477289 DDX27Q96GQ7 796 aaKnown RBP9.63□□□□□ -0.87
NSMCE4A-208ENST00000477289 PCDHGA10Q9Y5H3 936 aa9.63□□□□□ -0.87
NSMCE4A-208ENST00000477289 COL9A1P20849 921 aa9.61□□□□□ -0.87
NSMCE4A-208ENST00000477289 BCAMP50895 628 aa9.61□□□□□ -0.87
NSMCE4A-208ENST00000477289 SOWAHBA6NEL2 793 aa9.59□□□□□ -0.87
NSMCE4A-208ENST00000477289 EMILIN3Q9NT22 766 aa9.59□□□□□ -0.87
NSMCE4A-208ENST00000477289 LAPTM4BQ86VI4 370 aa9.58□□□□□ -0.88
NSMCE4A-208ENST00000477289 Q6ZNB5 142 aa9.57□□□□□ -0.88
NSMCE4A-208ENST00000477289 TYW1BQ6NUM6 668 aa9.56□□□□□ -0.88
NSMCE4A-208ENST00000477289 NYAP1Q6ZVC0 841 aa9.56□□□□□ -0.88
NSMCE4A-208ENST00000477289 FBXW7Q969H0 707 aa9.56□□□□□ -0.88
NSMCE4A-208ENST00000477289 ZFRQ96KR1 1074 aaKnown RBP9.56□□□□□ -0.88
NSMCE4A-208ENST00000477289 KIAA1468Q9P260 1216 aa9.56□□□□□ -0.88
NSMCE4A-208ENST00000477289 WBP1LQ9NX94 342 aa9.55□□□□□ -0.88
NSMCE4A-208ENST00000477289 PHF14O94880 888 aa9.54□□□□□ -0.88
NSMCE4A-208ENST00000477289 KCNC4Q03721 635 aa9.54□□□□□ -0.88
NSMCE4A-208ENST00000477289 ONECUT3O60422 494 aaPredicted RBP9.52□□□□□ -0.89
NSMCE4A-208ENST00000477289 SEPT9Q9UHD8 586 aaPredicted RBP9.52□□□□□ -0.89
NSMCE4A-208ENST00000477289 CAMK2BQ13554 666 aa9.51□□□□□ -0.89
NSMCE4A-208ENST00000477289 SPRYD3Q8NCJ5 442 aa9.51□□□□□ -0.89
NSMCE4A-208ENST00000477289 C6orf132Q5T0Z8 1188 aa9.49□□□□□ -0.89
NSMCE4A-208ENST00000477289 TRIM6-TRIM34B2RNG4 842 aa9.47□□□□□ -0.89
NSMCE4A-208ENST00000477289 FAM98CQ17RN3 349 aaKnown RBP9.47□□□□□ -0.89
NSMCE4A-208ENST00000477289 EPAS1Q99814 870 aa9.47□□□□□ -0.89
NSMCE4A-208ENST00000477289 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.47□□□□□ -0.89
NSMCE4A-208ENST00000477289 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.46□□□□□ -0.9
NSMCE4A-208ENST00000477289 TSR3Q9UJK0 312 aaKnown RBP9.46□□□□□ -0.9
NSMCE4A-208ENST00000477289 HPS5Q9UPZ3 1129 aa9.46□□□□□ -0.9
NSMCE4A-208ENST00000477289 DPYSL4O14531 572 aa9.44□□□□□ -0.9
NSMCE4A-208ENST00000477289 LAPTM4AQ15012 233 aa9.44□□□□□ -0.9
NSMCE4A-208ENST00000477289 PAXIP1Q6ZW49 1069 aaPredicted RBP9.44□□□□□ -0.9
NSMCE4A-208ENST00000477289 LRCH3Q96II8 777 aa9.44□□□□□ -0.9
NSMCE4A-208ENST00000477289 RBM33Q96EV2 1170 aaKnown RBP9.43□□□□□ -0.9
NSMCE4A-208ENST00000477289 CFAP44Q96MT7 982 aa9.43□□□□□ -0.9
NSMCE4A-208ENST00000477289 LCE2BO14633 110 aa9.42□□□□□ -0.9
NSMCE4A-208ENST00000477289 GFRA3O60609 400 aa9.4□□□□□ -0.9
NSMCE4A-208ENST00000477289 TRAF7Q6Q0C0 670 aa9.39□□□□□ -0.91
NSMCE4A-208ENST00000477289 DDX12PQ92771 950 aa9.39□□□□□ -0.91
NSMCE4A-208ENST00000477289 TSKSQ9UJT2 592 aa9.38□□□□□ -0.91
NSMCE4A-208ENST00000477289 PPP4CP60510 307 aa9.36□□□□□ -0.91
NSMCE4A-208ENST00000477289 TJAP1Q5JTD0 557 aa9.36□□□□□ -0.91
NSMCE4A-208ENST00000477289 PACS2Q86VP3 889 aa9.36□□□□□ -0.91
NSMCE4A-208ENST00000477289 EN1Q05925 392 aaPredicted RBP9.34□□□□□ -0.91
NSMCE4A-208ENST00000477289 PDIA6Q15084 440 aa9.34□□□□□ -0.91
NSMCE4A-208ENST00000477289 TSR1Q2NL82 804 aaKnown RBP9.34□□□□□ -0.91
NSMCE4A-208ENST00000477289 PRKD2Q9BZL6 878 aa9.34□□□□□ -0.91
NSMCE4A-208ENST00000477289 NBR1Q14596 966 aa9.33□□□□□ -0.92
NSMCE4A-208ENST00000477289 E2F4Q16254 413 aa9.33□□□□□ -0.92
NSMCE4A-208ENST00000477289 MAP3K7O43318 606 aa9.32□□□□□ -0.92
NSMCE4A-208ENST00000477289 SAMD7Q7Z3H4 446 aa9.32□□□□□ -0.92
NSMCE4A-208ENST00000477289 SMAPO00193 183 aa9.31□□□□□ -0.92
NSMCE4A-208ENST00000477289 NRG2O14511 850 aaPredicted RBP9.31□□□□□ -0.92
NSMCE4A-208ENST00000477289 PPP1R18Q6NYC8 613 aa9.31□□□□□ -0.92
NSMCE4A-208ENST00000477289 MTRQ99707 1265 aa9.31□□□□□ -0.92
NSMCE4A-208ENST00000477289 ARIH1Q9Y4X5 557 aaPredicted RBP9.31□□□□□ -0.92
NSMCE4A-208ENST00000477289 SPDYE16A6NNV3 312 aaPredicted RBP9.29□□□□□ -0.92
NSMCE4A-208ENST00000477289 CDCA7LQ96GN5 454 aa9.29□□□□□ -0.92
NSMCE4A-208ENST00000477289 IL21Q9HBE4 155 aa9.29□□□□□ -0.92
NSMCE4A-208ENST00000477289 V9GY48 417 aaPredicted RBP9.29□□□□□ -0.92
NSMCE4A-208ENST00000477289 WDR70Q9NW82 654 aa9.28□□□□□ -0.92
NSMCE4A-208ENST00000477289 FAM198AQ9UFP1 575 aa9.28□□□□□ -0.92
NSMCE4A-208ENST00000477289 C3orf80F5H4A9 247 aa9.26□□□□□ -0.93
NSMCE4A-208ENST00000477289 PRIM1P49642 420 aaKnown RBP9.26□□□□□ -0.93
NSMCE4A-208ENST00000477289 PRSS12P56730 875 aa9.26□□□□□ -0.93
NSMCE4A-208ENST00000477289 ZNF516Q92618 1163 aa9.26□□□□□ -0.93
NSMCE4A-208ENST00000477289 TSHZ2Q9NRE2 1034 aa9.26□□□□□ -0.93
NSMCE4A-208ENST00000477289 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.25□□□□□ -0.93
NSMCE4A-208ENST00000477289 TATDN2Q93075 761 aa9.24□□□□□ -0.93
NSMCE4A-208ENST00000477289 PNMA3Q9UL41 463 aa9.24□□□□□ -0.93
NSMCE4A-208ENST00000477289 NBPF26B4DH59 902 aa9.23□□□□□ -0.93
NSMCE4A-208ENST00000477289 CERKQ8TCT0 537 aa9.23□□□□□ -0.93
NSMCE4A-208ENST00000477289 RNF40O75150 1001 aa9.21□□□□□ -0.94
NSMCE4A-208ENST00000477289 APLP1P51693 650 aa9.21□□□□□ -0.94
NSMCE4A-208ENST00000477289 ZNF787Q6DD87 383 aa9.21□□□□□ -0.94
NSMCE4A-208ENST00000477289 PDZRN3Q9UPQ7 1066 aa9.21□□□□□ -0.94
NSMCE4A-208ENST00000477289 GRXCR2A6NFK2 248 aa9.2□□□□□ -0.94
NSMCE4A-208ENST00000477289 NKX2-3Q8TAU0 364 aa9.2□□□□□ -0.94
NSMCE4A-208ENST00000477289 OSBPP22059 807 aa9.19□□□□□ -0.94
NSMCE4A-208ENST00000477289 HDGFP51858 240 aaKnown RBP9.19□□□□□ -0.94
NSMCE4A-208ENST00000477289 NUDT18Q6ZVK8 323 aa9.18□□□□□ -0.94
NSMCE4A-208ENST00000477289 CDHR5Q9HBB8 845 aa9.16□□□□□ -0.94
NSMCE4A-208ENST00000477289 GGCXP38435 758 aa9.15□□□□□ -0.94
NSMCE4A-208ENST00000477289 CCDC180Q9P1Z9 1646 aa9.15□□□□□ -0.94
NSMCE4A-208ENST00000477289 COPS2P61201 443 aa9.14□□□□□ -0.95
NSMCE4A-208ENST00000477289 KCNV2Q8TDN2 545 aa9.14□□□□□ -0.95
NSMCE4A-208ENST00000477289 ZNF775Q96BV0 537 aaPredicted RBP9.14□□□□□ -0.95
NSMCE4A-208ENST00000477289 RBM27Q9P2N5 1060 aaKnown RBP9.14□□□□□ -0.95
NSMCE4A-208ENST00000477289 NECTIN2Q92692 538 aa9.13□□□□□ -0.95
NSMCE4A-208ENST00000477289 SWT1Q5T5J6 900 aaKnown RBP9.12□□□□□ -0.95
NSMCE4A-208ENST00000477289 ARHGEF1Q92888 912 aaKnown RBP9.12□□□□□ -0.95
NSMCE4A-208ENST00000477289 TMUB1Q9BVT8 246 aa9.12□□□□□ -0.95
NSMCE4A-208ENST00000477289 SLF2Q8IX21 1173 aa9.11□□□□□ -0.95
NSMCE4A-208ENST00000477289 ZPR1O75312 459 aa9.1□□□□□ -0.95
NSMCE4A-208ENST00000477289 MLLT3P42568 568 aaPredicted RBP9.1□□□□□ -0.95
NSMCE4A-208ENST00000477289 NPDC1Q9NQX5 325 aaPredicted RBP9.1□□□□□ -0.95
NSMCE4A-208ENST00000477289 TRIM67Q6ZTA4 783 aa9.09□□□□□ -0.95
NSMCE4A-208ENST00000477289 TTC13Q8NBP0 860 aa9.09□□□□□ -0.95
NSMCE4A-208ENST00000477289 PADI6Q6TGC4 694 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms