RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-208ENST00000477289 ANKK1Q8NFD2 765 aa9.64□□□□□ -0.87
NSMCE4A-208ENST00000477289 BBXQ8WY36 941 aaPredicted RBP9.63□□□□□ -0.87
NSMCE4A-208ENST00000477289 DDX27Q96GQ7 796 aaKnown RBP9.63□□□□□ -0.87
NSMCE4A-208ENST00000477289 PCDHGA10Q9Y5H3 936 aa9.63□□□□□ -0.87
NSMCE4A-208ENST00000477289 COL9A1P20849 921 aa9.61□□□□□ -0.87
NSMCE4A-208ENST00000477289 BCAMP50895 628 aa9.61□□□□□ -0.87
NSMCE4A-208ENST00000477289 SOWAHBA6NEL2 793 aa9.59□□□□□ -0.87
NSMCE4A-208ENST00000477289 EMILIN3Q9NT22 766 aa9.59□□□□□ -0.87
NSMCE4A-208ENST00000477289 LAPTM4BQ86VI4 370 aa9.58□□□□□ -0.88
NSMCE4A-208ENST00000477289 Q6ZNB5 142 aa9.57□□□□□ -0.88
NSMCE4A-208ENST00000477289 TYW1BQ6NUM6 668 aa9.56□□□□□ -0.88
NSMCE4A-208ENST00000477289 NYAP1Q6ZVC0 841 aa9.56□□□□□ -0.88
NSMCE4A-208ENST00000477289 FBXW7Q969H0 707 aa9.56□□□□□ -0.88
NSMCE4A-208ENST00000477289 ZFRQ96KR1 1074 aaKnown RBP9.56□□□□□ -0.88
NSMCE4A-208ENST00000477289 KIAA1468Q9P260 1216 aa9.56□□□□□ -0.88
NSMCE4A-208ENST00000477289 WBP1LQ9NX94 342 aa9.55□□□□□ -0.88
NSMCE4A-208ENST00000477289 PHF14O94880 888 aa9.54□□□□□ -0.88
NSMCE4A-208ENST00000477289 KCNC4Q03721 635 aa9.54□□□□□ -0.88
NSMCE4A-208ENST00000477289 ONECUT3O60422 494 aaPredicted RBP9.52□□□□□ -0.89
NSMCE4A-208ENST00000477289 SEPT9Q9UHD8 586 aaPredicted RBP9.52□□□□□ -0.89
NSMCE4A-208ENST00000477289 CAMK2BQ13554 666 aa9.51□□□□□ -0.89
NSMCE4A-208ENST00000477289 SPRYD3Q8NCJ5 442 aa9.51□□□□□ -0.89
NSMCE4A-208ENST00000477289 C6orf132Q5T0Z8 1188 aa9.49□□□□□ -0.89
NSMCE4A-208ENST00000477289 TRIM6-TRIM34B2RNG4 842 aa9.47□□□□□ -0.89
NSMCE4A-208ENST00000477289 FAM98CQ17RN3 349 aaKnown RBP9.47□□□□□ -0.89
NSMCE4A-208ENST00000477289 EPAS1Q99814 870 aa9.47□□□□□ -0.89
NSMCE4A-208ENST00000477289 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.47□□□□□ -0.89
NSMCE4A-208ENST00000477289 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.46□□□□□ -0.9
NSMCE4A-208ENST00000477289 TSR3Q9UJK0 312 aaKnown RBP9.46□□□□□ -0.9
NSMCE4A-208ENST00000477289 HPS5Q9UPZ3 1129 aa9.46□□□□□ -0.9
NSMCE4A-208ENST00000477289 DPYSL4O14531 572 aa9.44□□□□□ -0.9
NSMCE4A-208ENST00000477289 LAPTM4AQ15012 233 aa9.44□□□□□ -0.9
NSMCE4A-208ENST00000477289 PAXIP1Q6ZW49 1069 aaPredicted RBP9.44□□□□□ -0.9
NSMCE4A-208ENST00000477289 LRCH3Q96II8 777 aa9.44□□□□□ -0.9
NSMCE4A-208ENST00000477289 RBM33Q96EV2 1170 aaKnown RBP9.43□□□□□ -0.9
NSMCE4A-208ENST00000477289 CFAP44Q96MT7 982 aa9.43□□□□□ -0.9
NSMCE4A-208ENST00000477289 LCE2BO14633 110 aa9.42□□□□□ -0.9
NSMCE4A-208ENST00000477289 GFRA3O60609 400 aa9.4□□□□□ -0.9
NSMCE4A-208ENST00000477289 TRAF7Q6Q0C0 670 aa9.39□□□□□ -0.91
NSMCE4A-208ENST00000477289 DDX12PQ92771 950 aa9.39□□□□□ -0.91
NSMCE4A-208ENST00000477289 TSKSQ9UJT2 592 aa9.38□□□□□ -0.91
NSMCE4A-208ENST00000477289 PPP4CP60510 307 aa9.36□□□□□ -0.91
NSMCE4A-208ENST00000477289 TJAP1Q5JTD0 557 aa9.36□□□□□ -0.91
NSMCE4A-208ENST00000477289 PACS2Q86VP3 889 aa9.36□□□□□ -0.91
NSMCE4A-208ENST00000477289 EN1Q05925 392 aaPredicted RBP9.34□□□□□ -0.91
NSMCE4A-208ENST00000477289 PDIA6Q15084 440 aa9.34□□□□□ -0.91
NSMCE4A-208ENST00000477289 TSR1Q2NL82 804 aaKnown RBP9.34□□□□□ -0.91
NSMCE4A-208ENST00000477289 PRKD2Q9BZL6 878 aa9.34□□□□□ -0.91
NSMCE4A-208ENST00000477289 NBR1Q14596 966 aa9.33□□□□□ -0.92
NSMCE4A-208ENST00000477289 E2F4Q16254 413 aa9.33□□□□□ -0.92
NSMCE4A-208ENST00000477289 MAP3K7O43318 606 aa9.32□□□□□ -0.92
NSMCE4A-208ENST00000477289 SAMD7Q7Z3H4 446 aa9.32□□□□□ -0.92
NSMCE4A-208ENST00000477289 SMAPO00193 183 aa9.31□□□□□ -0.92
NSMCE4A-208ENST00000477289 NRG2O14511 850 aaPredicted RBP9.31□□□□□ -0.92
NSMCE4A-208ENST00000477289 PPP1R18Q6NYC8 613 aa9.31□□□□□ -0.92
NSMCE4A-208ENST00000477289 MTRQ99707 1265 aa9.31□□□□□ -0.92
NSMCE4A-208ENST00000477289 ARIH1Q9Y4X5 557 aaPredicted RBP9.31□□□□□ -0.92
NSMCE4A-208ENST00000477289 SPDYE16A6NNV3 312 aaPredicted RBP9.29□□□□□ -0.92
NSMCE4A-208ENST00000477289 CDCA7LQ96GN5 454 aa9.29□□□□□ -0.92
NSMCE4A-208ENST00000477289 IL21Q9HBE4 155 aa9.29□□□□□ -0.92
NSMCE4A-208ENST00000477289 V9GY48 417 aaPredicted RBP9.29□□□□□ -0.92
NSMCE4A-208ENST00000477289 WDR70Q9NW82 654 aa9.28□□□□□ -0.92
NSMCE4A-208ENST00000477289 FAM198AQ9UFP1 575 aa9.28□□□□□ -0.92
NSMCE4A-208ENST00000477289 C3orf80F5H4A9 247 aa9.26□□□□□ -0.93
NSMCE4A-208ENST00000477289 PRIM1P49642 420 aaKnown RBP9.26□□□□□ -0.93
NSMCE4A-208ENST00000477289 PRSS12P56730 875 aa9.26□□□□□ -0.93
NSMCE4A-208ENST00000477289 ZNF516Q92618 1163 aa9.26□□□□□ -0.93
NSMCE4A-208ENST00000477289 TSHZ2Q9NRE2 1034 aa9.26□□□□□ -0.93
NSMCE4A-208ENST00000477289 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.25□□□□□ -0.93
NSMCE4A-208ENST00000477289 TATDN2Q93075 761 aa9.24□□□□□ -0.93
NSMCE4A-208ENST00000477289 PNMA3Q9UL41 463 aa9.24□□□□□ -0.93
NSMCE4A-208ENST00000477289 NBPF26B4DH59 902 aa9.23□□□□□ -0.93
NSMCE4A-208ENST00000477289 CERKQ8TCT0 537 aa9.23□□□□□ -0.93
NSMCE4A-208ENST00000477289 RNF40O75150 1001 aa9.21□□□□□ -0.94
NSMCE4A-208ENST00000477289 APLP1P51693 650 aa9.21□□□□□ -0.94
NSMCE4A-208ENST00000477289 ZNF787Q6DD87 383 aa9.21□□□□□ -0.94
NSMCE4A-208ENST00000477289 PDZRN3Q9UPQ7 1066 aa9.21□□□□□ -0.94
NSMCE4A-208ENST00000477289 GRXCR2A6NFK2 248 aa9.2□□□□□ -0.94
NSMCE4A-208ENST00000477289 NKX2-3Q8TAU0 364 aa9.2□□□□□ -0.94
NSMCE4A-208ENST00000477289 OSBPP22059 807 aa9.19□□□□□ -0.94
NSMCE4A-208ENST00000477289 HDGFP51858 240 aaKnown RBP9.19□□□□□ -0.94
NSMCE4A-208ENST00000477289 NUDT18Q6ZVK8 323 aa9.18□□□□□ -0.94
NSMCE4A-208ENST00000477289 CDHR5Q9HBB8 845 aa9.16□□□□□ -0.94
NSMCE4A-208ENST00000477289 GGCXP38435 758 aa9.15□□□□□ -0.94
NSMCE4A-208ENST00000477289 CCDC180Q9P1Z9 1646 aa9.15□□□□□ -0.94
NSMCE4A-208ENST00000477289 COPS2P61201 443 aa9.14□□□□□ -0.95
NSMCE4A-208ENST00000477289 KCNV2Q8TDN2 545 aa9.14□□□□□ -0.95
NSMCE4A-208ENST00000477289 ZNF775Q96BV0 537 aaPredicted RBP9.14□□□□□ -0.95
NSMCE4A-208ENST00000477289 RBM27Q9P2N5 1060 aaKnown RBP9.14□□□□□ -0.95
NSMCE4A-208ENST00000477289 NECTIN2Q92692 538 aa9.13□□□□□ -0.95
NSMCE4A-208ENST00000477289 SWT1Q5T5J6 900 aaKnown RBP9.12□□□□□ -0.95
NSMCE4A-208ENST00000477289 ARHGEF1Q92888 912 aaKnown RBP9.12□□□□□ -0.95
NSMCE4A-208ENST00000477289 TMUB1Q9BVT8 246 aa9.12□□□□□ -0.95
NSMCE4A-208ENST00000477289 SLF2Q8IX21 1173 aa9.11□□□□□ -0.95
NSMCE4A-208ENST00000477289 ZPR1O75312 459 aa9.1□□□□□ -0.95
NSMCE4A-208ENST00000477289 MLLT3P42568 568 aaPredicted RBP9.1□□□□□ -0.95
NSMCE4A-208ENST00000477289 NPDC1Q9NQX5 325 aaPredicted RBP9.1□□□□□ -0.95
NSMCE4A-208ENST00000477289 TRIM67Q6ZTA4 783 aa9.09□□□□□ -0.95
NSMCE4A-208ENST00000477289 TTC13Q8NBP0 860 aa9.09□□□□□ -0.95
NSMCE4A-208ENST00000477289 PADI6Q6TGC4 694 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms