RNA–Protein interactions for RNA: ENST00000476744.5

CCNL1-218, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 1,029 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-218ENST00000476744 AXIN2Q9Y2T1 843 aa12.49□□□□□ -0.41
CCNL1-218ENST00000476744 HMGXB3Q12766 1538 aa12.48□□□□□ -0.41
CCNL1-218ENST00000476744 P3H3Q8IVL6 736 aa12.48□□□□□ -0.41
CCNL1-218ENST00000476744 ARHGAP33O14559 1287 aa12.47□□□□□ -0.41
CCNL1-218ENST00000476744 ZDHHC16Q969W1 377 aa12.47□□□□□ -0.41
CCNL1-218ENST00000476744 LSM11P83369 360 aaKnown RBP eCLIP12.46□□□□□ -0.413e-6■■■□□ 14.6
CCNL1-218ENST00000476744 POTEEQ6S8J3 1075 aa12.46□□□□□ -0.41
CCNL1-218ENST00000476744 PHF14O94880 888 aa12.45□□□□□ -0.42
CCNL1-218ENST00000476744 ANKRD13DQ6ZTN6 518 aa12.45□□□□□ -0.42
CCNL1-218ENST00000476744 DDX12PQ92771 950 aa12.45□□□□□ -0.42
CCNL1-218ENST00000476744 KCNK17Q96T54 332 aa12.45□□□□□ -0.42
CCNL1-218ENST00000476744 PCDHGA10Q9Y5H3 936 aa12.45□□□□□ -0.42
CCNL1-218ENST00000476744 ARHGEF1Q92888 912 aaKnown RBP12.44□□□□□ -0.42
CCNL1-218ENST00000476744 BCL2L12Q9HB09 334 aa12.44□□□□□ -0.42
CCNL1-218ENST00000476744 PRDM2Q13029 1718 aa12.43□□□□□ -0.42
CCNL1-218ENST00000476744 PTGER2P43116 358 aa12.43□□□□□ -0.42
CCNL1-218ENST00000476744 PSEN2P49810 448 aa12.43□□□□□ -0.42
CCNL1-218ENST00000476744 TYW1BQ6NUM6 668 aa12.43□□□□□ -0.42
CCNL1-218ENST00000476744 ABCC8Q09428 1581 aa12.43□□□□□ -0.42
CCNL1-218ENST00000476744 BAZ1BQ9UIG0 1483 aaKnown RBP12.42□□□□□ -0.42
CCNL1-218ENST00000476744 SPNS2Q8IVW8 549 aa12.42□□□□□ -0.42
CCNL1-218ENST00000476744 FBXW7Q969H0 707 aa12.42□□□□□ -0.42
CCNL1-218ENST00000476744 EPAS1Q99814 870 aa12.42□□□□□ -0.42
CCNL1-218ENST00000476744 PTPREP23469 700 aa12.41□□□□□ -0.42
CCNL1-218ENST00000476744 VSIG10Q8N0Z9 540 aa12.41□□□□□ -0.42
CCNL1-218ENST00000476744 ADAM33Q9BZ11 813 aa12.41□□□□□ -0.42
CCNL1-218ENST00000476744 KDM2AQ9Y2K7 1162 aa12.41□□□□□ -0.42
CCNL1-218ENST00000476744 NBR1Q14596 966 aa12.39□□□□□ -0.43
CCNL1-218ENST00000476744 EEA1Q15075 1411 aa12.38□□□□□ -0.43
CCNL1-218ENST00000476744 GRXCR2A6NFK2 248 aa12.38□□□□□ -0.43
CCNL1-218ENST00000476744 DMRTA1Q5VZB9 504 aa12.38□□□□□ -0.43
CCNL1-218ENST00000476744 RBM33Q96EV2 1170 aaKnown RBP12.37□□□□□ -0.43
CCNL1-218ENST00000476744 NCAPD3P42695 1498 aa12.36□□□□□ -0.43
CCNL1-218ENST00000476744 LOC105371045A0A1W2PR82 267 aa12.36□□□□□ -0.43
CCNL1-218ENST00000476744 BIVM-ERCC5R4GMW8 1640 aa12.36□□□□□ -0.43
CCNL1-218ENST00000476744 ADGRD1Q6QNK2 874 aa12.34□□□□□ -0.43
CCNL1-218ENST00000476744 SYNJ1O43426 1573 aa12.34□□□□□ -0.43
CCNL1-218ENST00000476744 TK2O00142 265 aa12.32□□□□□ -0.44
CCNL1-218ENST00000476744 MAP3K7O43318 606 aa12.32□□□□□ -0.44
CCNL1-218ENST00000476744 MMRN1Q13201 1228 aa12.32□□□□□ -0.44
CCNL1-218ENST00000476744 PPP1R3GB7ZBB8 358 aa12.31□□□□□ -0.44
CCNL1-218ENST00000476744 EN1Q05925 392 aaPredicted RBP12.31□□□□□ -0.44
CCNL1-218ENST00000476744 C6orf132Q5T0Z8 1188 aa12.31□□□□□ -0.44
CCNL1-218ENST00000476744 TOP2BQ02880 1626 aa12.3□□□□□ -0.44
CCNL1-218ENST00000476744 KIF21BO75037 1637 aa12.29□□□□□ -0.44
CCNL1-218ENST00000476744 WRNQ14191 1432 aaPredicted RBP eCLIP12.29□□□□□ -0.44
CCNL1-218ENST00000476744 MYT1LQ9UL68 1186 aa12.28□□□□□ -0.44
CCNL1-218ENST00000476744 MLLT3P42568 568 aaPredicted RBP12.27□□□□□ -0.45
CCNL1-218ENST00000476744 STAC3Q96MF2 364 aa12.27□□□□□ -0.45
CCNL1-218ENST00000476744 ZBED2Q9BTP6 218 aa12.27□□□□□ -0.45
CCNL1-218ENST00000476744 VPS9D1Q9Y2B5 631 aa12.27□□□□□ -0.45
CCNL1-218ENST00000476744 COL9A1P20849 921 aa12.26□□□□□ -0.45
CCNL1-218ENST00000476744 OSBPP22059 807 aa12.26□□□□□ -0.45
CCNL1-218ENST00000476744 SLC4A5Q9BY07 1137 aa12.26□□□□□ -0.45
CCNL1-218ENST00000476744 SEMA3EO15041 775 aa12.25□□□□□ -0.45
CCNL1-218ENST00000476744 TSR1Q2NL82 804 aaKnown RBP12.25□□□□□ -0.45
CCNL1-218ENST00000476744 HRCP23327 699 aa12.23□□□□□ -0.45
CCNL1-218ENST00000476744 PRIM1P49642 420 aaKnown RBP12.23□□□□□ -0.45
CCNL1-218ENST00000476744 RNF166Q96A37 237 aaPredicted RBP12.23□□□□□ -0.45
CCNL1-218ENST00000476744 HRO43593 1189 aa12.22□□□□□ -0.45
CCNL1-218ENST00000476744 PROX2Q3B8N5 592 aa12.21□□□□□ -0.45
CCNL1-218ENST00000476744 SOGA1O94964 1423 aa12.2□□□□□ -0.46
CCNL1-218ENST00000476744 TRIM26Q12899 539 aaPredicted RBP12.19□□□□□ -0.46
CCNL1-218ENST00000476744 CFTRP13569 1480 aa12.19□□□□□ -0.46
CCNL1-218ENST00000476744 TNIKQ9UKE5 1360 aa12.18□□□□□ -0.46
CCNL1-218ENST00000476744 NBPF3Q9H094 633 aa12.18□□□□□ -0.46
CCNL1-218ENST00000476744 GOLGA3Q08378 1498 aa12.18□□□□□ -0.46
CCNL1-218ENST00000476744 CERKQ8TCT0 537 aa12.17□□□□□ -0.46
CCNL1-218ENST00000476744 CDHR5Q9HBB8 845 aa12.17□□□□□ -0.46
CCNL1-218ENST00000476744 SMYD5Q6GMV2 418 aa12.16□□□□□ -0.46
CCNL1-218ENST00000476744 MRPL50Q8N5N7 158 aaKnown RBP12.16□□□□□ -0.46
CCNL1-218ENST00000476744 RABGEF1Q9UJ41 708 aa12.16□□□□□ -0.46
CCNL1-218ENST00000476744 CEP164Q9UPV0 1460 aa12.15□□□□□ -0.46
CCNL1-218ENST00000476744 TESPA1A2RU30 521 aaPredicted RBP12.15□□□□□ -0.46
CCNL1-218ENST00000476744 TRIM6-TRIM34B2RNG4 842 aa12.15□□□□□ -0.46
CCNL1-218ENST00000476744 PCGF6Q9BYE7 350 aa12.15□□□□□ -0.46
CCNL1-218ENST00000476744 RUSC2Q8N2Y8 1516 aa12.15□□□□□ -0.46
CCNL1-218ENST00000476744 BHMG1C9JSJ3 638 aaPredicted RBP12.14□□□□□ -0.47
CCNL1-218ENST00000476744 KIAA1468Q9P260 1216 aa12.14□□□□□ -0.47
CCNL1-218ENST00000476744 ERICH3Q5RHP9 1530 aa12.13□□□□□ -0.47
CCNL1-218ENST00000476744 GOLGA8CPA6NN73 597 aa12.13□□□□□ -0.47
CCNL1-218ENST00000476744 ONECUT3O60422 494 aaPredicted RBP12.13□□□□□ -0.47
CCNL1-218ENST00000476744 CEP162Q5TB80 1403 aa12.12□□□□□ -0.47
CCNL1-218ENST00000476744 PRSS12P56730 875 aa12.12□□□□□ -0.47
CCNL1-218ENST00000476744 FAM9AQ8IZU1 332 aaPredicted RBP12.12□□□□□ -0.47
CCNL1-218ENST00000476744 CDCA7LQ96GN5 454 aa12.12□□□□□ -0.47
CCNL1-218ENST00000476744 CUX1P39880 1505 aa12.11□□□□□ -0.47
CCNL1-218ENST00000476744 CC2D2AQ9P2K1 1620 aa12.11□□□□□ -0.47
CCNL1-218ENST00000476744 NUTM2FA1L443 756 aa12.11□□□□□ -0.47
CCNL1-218ENST00000476744 PACS2Q86VP3 889 aa12.11□□□□□ -0.47
CCNL1-218ENST00000476744 KCTD12Q96CX2 325 aaKnown RBP12.1□□□□□ -0.47
CCNL1-218ENST00000476744 TSKSQ9UJT2 592 aa12.09□□□□□ -0.47
CCNL1-218ENST00000476744 NPDC1Q9NQX5 325 aaPredicted RBP12.07□□□□□ -0.48
CCNL1-218ENST00000476744 RBM27Q9P2N5 1060 aaKnown RBP12.07□□□□□ -0.48
CCNL1-218ENST00000476744 SEPT9Q9UHD8 586 aaPredicted RBP12.07□□□□□ -0.48
CCNL1-218ENST00000476744 TULP1O00294 542 aaPredicted RBP12.06□□□□□ -0.48
CCNL1-218ENST00000476744 RBM26Q5T8P6 1007 aaKnown RBP12.06□□□□□ -0.48
CCNL1-218ENST00000476744 LAPTM4BQ86VI4 370 aa12.06□□□□□ -0.48
CCNL1-218ENST00000476744 WNT2BQ93097 391 aa12.05□□□□□ -0.48
CCNL1-218ENST00000476744 NBPF26B4DH59 902 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms