RNA–Protein interactions for RNA: ENST00000476742.1

NPHP3-207, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 650 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-207ENST00000476742 ZBED2Q9BTP6 218 aa8.38□□□□□ -1.07
NPHP3-207ENST00000476742 BCL2L12Q9HB09 334 aa8.34□□□□□ -1.07
NPHP3-207ENST00000476742 BCAMP50895 628 aa8.33□□□□□ -1.08
NPHP3-207ENST00000476742 SOWAHBA6NEL2 793 aa8.32□□□□□ -1.08
NPHP3-207ENST00000476742 PPP1R37O75864 691 aa8.3□□□□□ -1.08
NPHP3-207ENST00000476742 DGAT1O75907 488 aa8.29□□□□□ -1.08
NPHP3-207ENST00000476742 PKDCCQ504Y2 493 aa8.29□□□□□ -1.08
NPHP3-207ENST00000476742 WBP1LQ9NX94 342 aa8.29□□□□□ -1.08
NPHP3-207ENST00000476742 HAP1P54257 671 aaPredicted RBP8.28□□□□□ -1.08
NPHP3-207ENST00000476742 NFX1Q12986 1120 aaKnown RBP8.28□□□□□ -1.08
NPHP3-207ENST00000476742 FAM181BA6NEQ2 426 aa8.27□□□□□ -1.09
NPHP3-207ENST00000476742 PTPREP23469 700 aa8.27□□□□□ -1.09
NPHP3-207ENST00000476742 TMC2Q8TDI7 906 aa8.27□□□□□ -1.09
NPHP3-207ENST00000476742 KRTAP4-8Q9BYQ9 185 aa8.25□□□□□ -1.09
NPHP3-207ENST00000476742 PPP1R18Q6NYC8 613 aa8.24□□□□□ -1.09
NPHP3-207ENST00000476742 TSHZ2Q9NRE2 1034 aa8.22□□□□□ -1.09
NPHP3-207ENST00000476742 TRIM67Q6ZTA4 783 aa8.21□□□□□ -1.1
NPHP3-207ENST00000476742 TBC1D12O60347 775 aa8.2□□□□□ -1.1
NPHP3-207ENST00000476742 ZNF454Q8N9F8 522 aa8.2□□□□□ -1.1
NPHP3-207ENST00000476742 PDE4AP27815 886 aa8.19□□□□□ -1.1
NPHP3-207ENST00000476742 LAPTM4BQ86VI4 370 aa8.19□□□□□ -1.1
NPHP3-207ENST00000476742 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.19□□□□□ -1.1
NPHP3-207ENST00000476742 RABGEF1Q9UJ41 708 aa8.19□□□□□ -1.1
NPHP3-207ENST00000476742 SLC24A1O60721 1099 aa8.18□□□□□ -1.1
NPHP3-207ENST00000476742 CADPS2Q86UW7 1296 aa8.16□□□□□ -1.1
NPHP3-207ENST00000476742 VSIG10Q8N0Z9 540 aa8.16□□□□□ -1.1
NPHP3-207ENST00000476742 TJAP1Q5JTD0 557 aa8.15□□□□□ -1.1
NPHP3-207ENST00000476742 LCE2CQ5TA81 110 aa8.15□□□□□ -1.1
NPHP3-207ENST00000476742 WDR70Q9NW82 654 aa8.15□□□□□ -1.1
NPHP3-207ENST00000476742 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.14□□□□□ -1.11
NPHP3-207ENST00000476742 ZFRQ96KR1 1074 aaKnown RBP8.14□□□□□ -1.11
NPHP3-207ENST00000476742 GPHNQ9NQX3 736 aaPredicted RBP8.14□□□□□ -1.11
NPHP3-207ENST00000476742 LARP6Q9BRS8 491 aaKnown RBP8.13□□□□□ -1.11
NPHP3-207ENST00000476742 CRISPLD2Q9H0B8 497 aa8.13□□□□□ -1.11
NPHP3-207ENST00000476742 AAASQ9NRG9 546 aa8.13□□□□□ -1.11
NPHP3-207ENST00000476742 TSR3Q9UJK0 312 aaKnown RBP8.13□□□□□ -1.11
NPHP3-207ENST00000476742 NCKAP5LQ9HCH0 1330 aa8.12□□□□□ -1.11
NPHP3-207ENST00000476742 XP32Q5T750 250 aa8.12□□□□□ -1.11
NPHP3-207ENST00000476742 FOSBP53539 338 aa8.11□□□□□ -1.11
NPHP3-207ENST00000476742 PRR20EP86478 221 aa8.11□□□□□ -1.11
NPHP3-207ENST00000476742 PRR20CP86479 221 aa8.11□□□□□ -1.11
NPHP3-207ENST00000476742 PRR20DP86480 221 aa8.11□□□□□ -1.11
NPHP3-207ENST00000476742 PRR20BP86481 221 aa8.11□□□□□ -1.11
NPHP3-207ENST00000476742 PRR20AP86496 221 aa8.11□□□□□ -1.11
NPHP3-207ENST00000476742 DDX27Q96GQ7 796 aaKnown RBP8.11□□□□□ -1.11
NPHP3-207ENST00000476742 KRTAP9-2Q9BYQ4 174 aa8.11□□□□□ -1.11
NPHP3-207ENST00000476742 ST8SIA5O15466 376 aa8.1□□□□□ -1.11
NPHP3-207ENST00000476742 FOXK1P85037 733 aa8.09□□□□□ -1.11
NPHP3-207ENST00000476742 MFSD10Q14728 455 aa8.08□□□□□ -1.12
NPHP3-207ENST00000476742 PPP1R15BQ5SWA1 713 aa8.08□□□□□ -1.12
NPHP3-207ENST00000476742 KRTAP9-6A0A140TA67 174 aa8.07□□□□□ -1.12
NPHP3-207ENST00000476742 FAM187AA6NFU0 413 aa8.07□□□□□ -1.12
NPHP3-207ENST00000476742 DSG2Q14126 1118 aa8.07□□□□□ -1.12
NPHP3-207ENST00000476742 HPS5Q9UPZ3 1129 aa8.07□□□□□ -1.12
NPHP3-207ENST00000476742 PLPP6Q8IY26 295 aa8.06□□□□□ -1.12
NPHP3-207ENST00000476742 KDM2AQ9Y2K7 1162 aa8.06□□□□□ -1.12
NPHP3-207ENST00000476742 KRTAP1-3Q8IUG1 177 aa8.04□□□□□ -1.12
NPHP3-207ENST00000476742 IL21Q9HBE4 155 aa8.04□□□□□ -1.12
NPHP3-207ENST00000476742 C11orf95C9JLR9 678 aaPredicted RBP8.03□□□□□ -1.12
NPHP3-207ENST00000476742 LORP23490 312 aaPredicted RBP8.03□□□□□ -1.12
NPHP3-207ENST00000476742 E2F4Q16254 413 aa8.03□□□□□ -1.12
NPHP3-207ENST00000476742 PROX2Q3B8N5 592 aa8.03□□□□□ -1.12
NPHP3-207ENST00000476742 ADAM33Q9BZ11 813 aa8.03□□□□□ -1.12
NPHP3-207ENST00000476742 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.03□□□□□ -1.12
NPHP3-207ENST00000476742 PPP1R3GB7ZBB8 358 aa8.02□□□□□ -1.13
NPHP3-207ENST00000476742 P3H3Q8IVL6 736 aa8.02□□□□□ -1.13
NPHP3-207ENST00000476742 ZSCAN1Q8NBB4 408 aa8.02□□□□□ -1.13
NPHP3-207ENST00000476742 MTRQ99707 1265 aa8.01□□□□□ -1.13
NPHP3-207ENST00000476742 ANO8Q9HCE9 1232 aaPredicted RBP8.01□□□□□ -1.13
NPHP3-207ENST00000476742 TERTO14746 1132 aaKnown RBP8□□□□□ -1.13
NPHP3-207ENST00000476742 GGCXP38435 758 aa8□□□□□ -1.13
NPHP3-207ENST00000476742 CRIPAKQ8N1N5 446 aa8□□□□□ -1.13
NPHP3-207ENST00000476742 KCTD17Q8N5Z5 321 aa8□□□□□ -1.13
NPHP3-207ENST00000476742 ZDHHC16Q969W1 377 aa8□□□□□ -1.13
NPHP3-207ENST00000476742 LRCH3Q96II8 777 aa8□□□□□ -1.13
NPHP3-207ENST00000476742 JPH4Q96JJ6 628 aa8□□□□□ -1.13
NPHP3-207ENST00000476742 GMPR2Q9P2T1 348 aaKnown RBP8□□□□□ -1.13
NPHP3-207ENST00000476742 CAMK2BQ13554 666 aa7.98□□□□□ -1.13
NPHP3-207ENST00000476742 TMUB1Q9BVT8 246 aa7.98□□□□□ -1.13
NPHP3-207ENST00000476742 SLC19A1P41440 591 aa7.96□□□□□ -1.14
NPHP3-207ENST00000476742 ZNF598Q86UK7 904 aaKnown RBP7.96□□□□□ -1.14
NPHP3-207ENST00000476742 OXER1Q8TDS5 423 aa7.96□□□□□ -1.14
NPHP3-207ENST00000476742 PSMG3-AS1Q96PY0 264 aa7.96□□□□□ -1.14
NPHP3-207ENST00000476742 KIAA1468Q9P260 1216 aa7.96□□□□□ -1.14
NPHP3-207ENST00000476742 DACH1Q9UI36 760 aa7.96□□□□□ -1.14
NPHP3-207ENST00000476742 MAP3K9P80192 1104 aa7.95□□□□□ -1.14
NPHP3-207ENST00000476742 KCNV2Q8TDN2 545 aa7.95□□□□□ -1.14
NPHP3-207ENST00000476742 ZNF516Q92618 1163 aa7.95□□□□□ -1.14
NPHP3-207ENST00000476742 UPF1Q92900 1129 aaKnown RBP eCLIP7.95□□□□□ -1.14
NPHP3-207ENST00000476742 ONECUT3O60422 494 aaPredicted RBP7.94□□□□□ -1.14
NPHP3-207ENST00000476742 FAM98CQ17RN3 349 aaKnown RBP7.94□□□□□ -1.14
NPHP3-207ENST00000476742 SPRYD7Q5W111 196 aa7.94□□□□□ -1.14
NPHP3-207ENST00000476742 ARHGEF1Q92888 912 aaKnown RBP7.94□□□□□ -1.14
NPHP3-207ENST00000476742 EMILIN3Q9NT22 766 aa7.94□□□□□ -1.14
NPHP3-207ENST00000476742 PPP4CP60510 307 aa7.93□□□□□ -1.14
NPHP3-207ENST00000476742 SEPT9Q9UHD8 586 aaPredicted RBP7.93□□□□□ -1.14
NPHP3-207ENST00000476742 EMID1Q96A84 441 aaPredicted RBP7.92□□□□□ -1.14
NPHP3-207ENST00000476742 ARIH1Q9Y4X5 557 aaPredicted RBP7.92□□□□□ -1.14
NPHP3-207ENST00000476742 DPYSL4O14531 572 aa7.91□□□□□ -1.14
NPHP3-207ENST00000476742 GDF9O60383 454 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms