RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-208ENST00000475997 CFAP44Q96MT7 982 aa7.75□□□□□ -1.17
HNRNPU-208ENST00000475997 GOLGA6L4A6NEF3 574 aa7.75□□□□□ -1.17
HNRNPU-208ENST00000475997 TCERG1O14776 1098 aaKnown RBP7.75□□□□□ -1.17
HNRNPU-208ENST00000475997 RRP1P56182 461 aaKnown RBP7.75□□□□□ -1.17
HNRNPU-208ENST00000475997 HECW1Q76N89 1606 aa7.75□□□□□ -1.17
HNRNPU-208ENST00000475997 SNAPC4Q5SXM2 1469 aa7.75□□□□□ -1.17
HNRNPU-208ENST00000475997 VSIG10Q8N0Z9 540 aa7.75□□□□□ -1.17
HNRNPU-208ENST00000475997 CFAP43Q8NDM7 1665 aa7.75□□□□□ -1.17
HNRNPU-208ENST00000475997 ABCC5O15440 1437 aa7.74□□□□□ -1.17
HNRNPU-208ENST00000475997 PDE3BQ13370 1112 aa7.74□□□□□ -1.17
HNRNPU-208ENST00000475997 RSPH4AQ5TD94 716 aa7.74□□□□□ -1.17
HNRNPU-208ENST00000475997 HSCBQ8IWL3 235 aa7.74□□□□□ -1.17
HNRNPU-208ENST00000475997 CCDC144AA2RUR9 1427 aa7.74□□□□□ -1.17
HNRNPU-208ENST00000475997 SETQ01105 290 aaPredicted RBP7.74□□□□□ -1.17
HNRNPU-208ENST00000475997 GOLGA6L1Q8N7Z2 621 aa7.74□□□□□ -1.17
HNRNPU-208ENST00000475997 NCOA1Q15788 1441 aa7.74□□□□□ -1.17
HNRNPU-208ENST00000475997 KIAA1107Q9UPP5 1409 aa7.74□□□□□ -1.17
HNRNPU-208ENST00000475997 NBPF1Q3BBV0 1214 aa7.73□□□□□ -1.17
HNRNPU-208ENST00000475997 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.73□□□□□ -1.17
HNRNPU-208ENST00000475997 ROCK1Q13464 1354 aa7.73□□□□□ -1.17
HNRNPU-208ENST00000475997 IQGAP2Q13576 1575 aa7.73□□□□□ -1.17
HNRNPU-208ENST00000475997 LAMC3Q9Y6N6 1575 aa7.73□□□□□ -1.17
HNRNPU-208ENST00000475997 MS4A1P11836 297 aa7.73□□□□□ -1.17
HNRNPU-208ENST00000475997 GBP4Q96PP9 640 aa7.73□□□□□ -1.17
HNRNPU-208ENST00000475997 TROQ12816 1431 aaPredicted RBP7.73□□□□□ -1.17
HNRNPU-208ENST00000475997 EFCAB2Q5VUJ9 269 aa7.72□□□□□ -1.17
HNRNPU-208ENST00000475997 CDCA7LQ96GN5 454 aa7.72□□□□□ -1.17
HNRNPU-208ENST00000475997 PTPRGP23470 1445 aa7.72□□□□□ -1.17
HNRNPU-208ENST00000475997 RPRD2Q5VT52 1461 aaKnown RBP7.72□□□□□ -1.17
HNRNPU-208ENST00000475997 NPM1P06748 294 aaKnown RBP eCLIP7.72□□□□□ -1.17
HNRNPU-208ENST00000475997 PDE4AP27815 886 aa7.72□□□□□ -1.17
HNRNPU-208ENST00000475997 FRAT1Q92837 279 aaPredicted RBP7.72□□□□□ -1.17
HNRNPU-208ENST00000475997 DRC7Q8IY82 874 aa7.72□□□□□ -1.17
HNRNPU-208ENST00000475997 UGGT2Q9NYU1 1516 aa7.72□□□□□ -1.17
HNRNPU-208ENST00000475997 PAK3O75914 559 aaPredicted RBP7.71□□□□□ -1.18
HNRNPU-208ENST00000475997 CCDC146Q8IYE0 955 aa7.71□□□□□ -1.18
HNRNPU-208ENST00000475997 THOC2Q8NI27 1593 aaKnown RBP7.7□□□□□ -1.18
HNRNPU-208ENST00000475997 KIAA0586Q9BVV6 1533 aa7.7□□□□□ -1.18
HNRNPU-208ENST00000475997 CRBNQ96SW2 442 aa7.7□□□□□ -1.18
HNRNPU-208ENST00000475997 CTTNBP2Q8WZ74 1663 aa7.7□□□□□ -1.18
HNRNPU-208ENST00000475997 GOLGA6L3A6NEY3 463 aa7.7□□□□□ -1.18
HNRNPU-208ENST00000475997 GOLGA2Q08379 1002 aa7.7□□□□□ -1.18
HNRNPU-208ENST00000475997 SYAP1Q96A49 352 aaPredicted RBP7.7□□□□□ -1.18
HNRNPU-208ENST00000475997 BRD4O60885 1362 aaPredicted RBP7.7□□□□□ -1.18
HNRNPU-208ENST00000475997 MRC2Q9UBG0 1479 aa7.69□□□□□ -1.18
HNRNPU-208ENST00000475997 SMG6Q86US8 1419 aaKnown RBP7.69□□□□□ -1.18
HNRNPU-208ENST00000475997 FTSJ3Q8IY81 847 aaKnown RBP7.69□□□□□ -1.18
HNRNPU-208ENST00000475997 PLB1Q6P1J6 1458 aa7.69□□□□□ -1.18
HNRNPU-208ENST00000475997 A0A0U1RQG5 324 aaPredicted RBP7.69□□□□□ -1.18
HNRNPU-208ENST00000475997 KIF3BO15066 747 aa7.69□□□□□ -1.18
HNRNPU-208ENST00000475997 C9orf84Q5VXU9 1444 aa7.69□□□□□ -1.18
HNRNPU-208ENST00000475997 ZNF608Q9ULD9 1512 aaPredicted RBP7.68□□□□□ -1.18
HNRNPU-208ENST00000475997 NOC3LQ8WTT2 800 aaKnown RBP7.68□□□□□ -1.18
HNRNPU-208ENST00000475997 SPAG9O60271 1321 aaKnown RBP7.68□□□□□ -1.18
HNRNPU-208ENST00000475997 ADAMTS8Q9UP79 889 aa7.67□□□□□ -1.18
HNRNPU-208ENST00000475997 IFT140Q96RY7 1462 aa7.67□□□□□ -1.18
HNRNPU-208ENST00000475997 CFAP53Q96M91 514 aa7.67□□□□□ -1.18
HNRNPU-208ENST00000475997 MORC1Q86VD1 984 aa7.67□□□□□ -1.18
HNRNPU-208ENST00000475997 STAG3Q9UJ98 1225 aa7.67□□□□□ -1.18
HNRNPU-208ENST00000475997 CAMSAP2Q08AD1 1489 aa7.67□□□□□ -1.18
HNRNPU-208ENST00000475997 SLC4A3P48751 1232 aa7.67□□□□□ -1.18
HNRNPU-208ENST00000475997 MCCP23508 829 aa7.66□□□□□ -1.18
HNRNPU-208ENST00000475997 HTATSF1O43719 755 aaKnown RBP7.66□□□□□ -1.18
HNRNPU-208ENST00000475997 KANK1Q14678 1352 aa7.66□□□□□ -1.18
HNRNPU-208ENST00000475997 APAF1O14727 1248 aa7.66□□□□□ -1.18
HNRNPU-208ENST00000475997 FGD1P98174 961 aa7.66□□□□□ -1.18
HNRNPU-208ENST00000475997 TCOF1Q13428 1488 aaKnown RBP7.66□□□□□ -1.18
HNRNPU-208ENST00000475997 GGT6Q6P531 493 aa7.66□□□□□ -1.18
HNRNPU-208ENST00000475997 SAFB2Q14151 953 aaKnown RBP eCLIP7.65□□□□□ -1.18
HNRNPU-208ENST00000475997 TPRNQ4KMQ1 711 aa7.65□□□□□ -1.18
HNRNPU-208ENST00000475997 MAGI3Q5TCQ9 1506 aa7.65□□□□□ -1.18
HNRNPU-208ENST00000475997 ARID3AQ99856 593 aa7.65□□□□□ -1.19
HNRNPU-208ENST00000475997 GPS2Q13227 327 aa7.64□□□□□ -1.19
HNRNPU-208ENST00000475997 U2SURPO15042 1029 aaKnown RBP7.64□□□□□ -1.19
HNRNPU-208ENST00000475997 ARHGEF11O15085 1522 aa7.64□□□□□ -1.19
HNRNPU-208ENST00000475997 TPM4P67936 248 aa7.64□□□□□ -1.19
HNRNPU-208ENST00000475997 GPATCH8Q9UKJ3 1502 aaKnown RBP7.64□□□□□ -1.19
HNRNPU-208ENST00000475997 NUP153P49790 1475 aaKnown RBP7.64□□□□□ -1.19
HNRNPU-208ENST00000475997 GRIN2AQ12879 1464 aa7.63□□□□□ -1.19
HNRNPU-208ENST00000475997 AFAP1Q8N556 730 aa7.63□□□□□ -1.19
HNRNPU-208ENST00000475997 TRAK1Q9UPV9 953 aa7.63□□□□□ -1.19
HNRNPU-208ENST00000475997 RRP7AQ9Y3A4 280 aaKnown RBP7.63□□□□□ -1.19
HNRNPU-208ENST00000475997 APPP05067 770 aa7.63□□□□□ -1.19
HNRNPU-208ENST00000475997 KCNJ4P48050 445 aa7.63□□□□□ -1.19
HNRNPU-208ENST00000475997 CENPQQ7L2Z9 268 aaPredicted RBP7.63□□□□□ -1.19
HNRNPU-208ENST00000475997 SKAP1Q86WV1 359 aa7.63□□□□□ -1.19
HNRNPU-208ENST00000475997 CLUAP1Q96AJ1 413 aa7.63□□□□□ -1.19
HNRNPU-208ENST00000475997 SAMD9Q5K651 1589 aa7.62□□□□□ -1.19
HNRNPU-208ENST00000475997 SYNJ2O15056 1496 aa7.62□□□□□ -1.19
HNRNPU-208ENST00000475997 WASHC2CQ9Y4E1 1318 aa7.62□□□□□ -1.19
HNRNPU-208ENST00000475997 PPP2R1AP30153 589 aa7.62□□□□□ -1.19
HNRNPU-208ENST00000475997 MAP7D2Q96T17 732 aa7.62□□□□□ -1.19
HNRNPU-208ENST00000475997 U2AF1L5P0DN76 240 aaPredicted RBP7.62□□□□□ -1.19
HNRNPU-208ENST00000475997 U2AF1Q01081 240 aaKnown RBP eCLIP7.62□□□□□ -1.19
HNRNPU-208ENST00000475997 MTERF4Q7Z6M4 381 aaKnown RBP7.62□□□□□ -1.19
HNRNPU-208ENST00000475997 CCDC34Q96HJ3 373 aa7.62□□□□□ -1.19
HNRNPU-208ENST00000475997 NUTM2DQ5VT03 806 aaPredicted RBP7.61□□□□□ -1.19
HNRNPU-208ENST00000475997 ZNF771Q7L3S4 317 aaPredicted RBP7.61□□□□□ -1.19
HNRNPU-208ENST00000475997 BACH2Q9BYV9 841 aa7.61□□□□□ -1.19
HNRNPU-208ENST00000475997 DHX29Q7Z478 1369 aaKnown RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms