RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 MAGI3Q5TCQ9 1506 aa13.69□□□□□ -0.22
ABCF1-205ENST00000475993 SAMD9Q5K651 1589 aa13.69□□□□□ -0.22
ABCF1-205ENST00000475993 INSRP06213 1382 aa13.67□□□□□ -0.22
ABCF1-205ENST00000475993 E9PCH4 1651 aa13.67□□□□□ -0.22
ABCF1-205ENST00000475993 CC2D2AQ9P2K1 1620 aa13.66□□□□□ -0.22
ABCF1-205ENST00000475993 ROCK1Q13464 1354 aa13.66□□□□□ -0.22
ABCF1-205ENST00000475993 C20orf194Q5TEA3 1177 aa13.66□□□□□ -0.22
ABCF1-205ENST00000475993 NLRP13Q86W25 1043 aa13.66□□□□□ -0.22
ABCF1-205ENST00000475993 CUL7Q14999 1698 aa13.66□□□□□ -0.22
ABCF1-205ENST00000475993 ZMYM4Q5VZL5 1548 aa13.66□□□□□ -0.22
ABCF1-205ENST00000475993 SLC4A1APQ9BWU0 796 aaKnown RBP13.64□□□□□ -0.23
ABCF1-205ENST00000475993 PARD3Q8TEW0 1356 aa13.64□□□□□ -0.23
ABCF1-205ENST00000475993 BLMP54132 1417 aaPredicted RBP13.64□□□□□ -0.23
ABCF1-205ENST00000475993 VIRMAQ69YN4 1812 aaKnown RBP13.64□□□□□ -0.23
ABCF1-205ENST00000475993 USP19O94966 1318 aa13.63□□□□□ -0.23
ABCF1-205ENST00000475993 XRCC6P12956 609 aaKnown RBP eCLIP13.63□□□□□ -0.23
ABCF1-205ENST00000475993 GTF2E1P29083 439 aaPredicted RBP13.63□□□□□ -0.23
ABCF1-205ENST00000475993 PDCL3Q9H2J4 239 aa13.63□□□□□ -0.23
ABCF1-205ENST00000475993 FSD2A1L4K1 749 aa13.63□□□□□ -0.23
ABCF1-205ENST00000475993 PLEKHH2Q8IVE3 1493 aa13.62□□□□□ -0.23
ABCF1-205ENST00000475993 DNMBPQ6XZF7 1577 aa13.62□□□□□ -0.23
ABCF1-205ENST00000475993 RALGAPBQ86X10 1494 aa13.62□□□□□ -0.23
ABCF1-205ENST00000475993 UHRF1BP1Q6BDS2 1440 aa13.62□□□□□ -0.23
ABCF1-205ENST00000475993 PZPP20742 1482 aa13.6□□□□□ -0.23
ABCF1-205ENST00000475993 ABCA10Q8WWZ4 1543 aa13.6□□□□□ -0.23
ABCF1-205ENST00000475993 ANTXR1Q9H6X2 564 aa13.6□□□□□ -0.23
ABCF1-205ENST00000475993 GOLGA6L3A6NEY3 463 aa13.59□□□□□ -0.23
ABCF1-205ENST00000475993 KIF21AQ7Z4S6 1674 aa13.59□□□□□ -0.23
ABCF1-205ENST00000475993 DAPK1P53355 1430 aa13.59□□□□□ -0.23
ABCF1-205ENST00000475993 CANXP27824 592 aaKnown RBP13.59□□□□□ -0.23
ABCF1-205ENST00000475993 BECN1Q14457 450 aa13.58□□□□□ -0.23
ABCF1-205ENST00000475993 ZNF326Q5BKZ1 582 aaKnown RBP13.58□□□□□ -0.24
ABCF1-205ENST00000475993 CENPJQ9HC77 1338 aaPredicted RBP13.58□□□□□ -0.24
ABCF1-205ENST00000475993 STAC3Q96MF2 364 aa13.57□□□□□ -0.24
ABCF1-205ENST00000475993 FANCD2Q9BXW9 1451 aa13.57□□□□□ -0.24
ABCF1-205ENST00000475993 ARXQ96QS3 562 aa13.57□□□□□ -0.24
ABCF1-205ENST00000475993 PANK2Q9BZ23 570 aa13.57□□□□□ -0.24
ABCF1-205ENST00000475993 DNMT1P26358 1616 aaKnown RBP13.56□□□□□ -0.24
ABCF1-205ENST00000475993 PHF23Q9BUL5 403 aaPredicted RBP13.56□□□□□ -0.24
ABCF1-205ENST00000475993 KIAA1107Q9UPP5 1409 aa13.56□□□□□ -0.24
ABCF1-205ENST00000475993 SLKQ9H2G2 1235 aaPredicted RBP13.56□□□□□ -0.24
ABCF1-205ENST00000475993 LAMC3Q9Y6N6 1575 aa13.56□□□□□ -0.24
ABCF1-205ENST00000475993 GAPVD1Q14C86 1478 aa13.56□□□□□ -0.24
ABCF1-205ENST00000475993 ABCC5O15440 1437 aa13.55□□□□□ -0.24
ABCF1-205ENST00000475993 CARD11Q9BXL7 1154 aa13.55□□□□□ -0.24
ABCF1-205ENST00000475993 NLRP1Q9C000 1473 aa13.55□□□□□ -0.24
ABCF1-205ENST00000475993 ST20-MTHFSA0A0A6YYL1 179 aa13.55□□□□□ -0.24
ABCF1-205ENST00000475993 ZHX1Q9UKY1 873 aaPredicted RBP13.55□□□□□ -0.24
ABCF1-205ENST00000475993 ZNF608Q9ULD9 1512 aaPredicted RBP13.54□□□□□ -0.24
ABCF1-205ENST00000475993 RAD54L2Q9Y4B4 1467 aa13.54□□□□□ -0.24
ABCF1-205ENST00000475993 PER1O15534 1290 aaPredicted RBP13.53□□□□□ -0.24
ABCF1-205ENST00000475993 IPO4Q8TEX9 1081 aaKnown RBP13.53□□□□□ -0.24
ABCF1-205ENST00000475993 DUSP27Q5VZP5 1158 aa13.52□□□□□ -0.24
ABCF1-205ENST00000475993 ARHGEF12Q9NZN5 1544 aa13.52□□□□□ -0.25
ABCF1-205ENST00000475993 SEC24BO95487 1268 aa13.52□□□□□ -0.25
ABCF1-205ENST00000475993 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.52□□□□□ -0.25
ABCF1-205ENST00000475993 EIF3AQ14152 1382 aaKnown RBP13.52□□□□□ -0.25
ABCF1-205ENST00000475993 MRE11P49959 708 aa13.51□□□□□ -0.25
ABCF1-205ENST00000475993 NESP48681 1621 aa13.51□□□□□ -0.25
ABCF1-205ENST00000475993 EPRSP07814 1512 aaKnown RBP13.51□□□□□ -0.25
ABCF1-205ENST00000475993 TOPBP1Q92547 1522 aa13.51□□□□□ -0.25
ABCF1-205ENST00000475993 ESPNB1AK53 854 aa13.51□□□□□ -0.25
ABCF1-205ENST00000475993 TPM2P07951 284 aa13.5□□□□□ -0.25
ABCF1-205ENST00000475993 MCM4P33991 863 aa13.5□□□□□ -0.25
ABCF1-205ENST00000475993 RSPH4AQ5TD94 716 aa13.5□□□□□ -0.25
ABCF1-205ENST00000475993 PLCD3Q8N3E9 789 aa13.49□□□□□ -0.25
ABCF1-205ENST00000475993 ERBB4Q15303 1308 aa13.49□□□□□ -0.25
ABCF1-205ENST00000475993 POLA1P09884 1462 aaPredicted RBP13.49□□□□□ -0.25
ABCF1-205ENST00000475993 ZNF521Q96K83 1311 aa13.48□□□□□ -0.25
ABCF1-205ENST00000475993 MAPK8IP3Q9UPT6 1336 aa13.48□□□□□ -0.25
ABCF1-205ENST00000475993 PLEKHH1Q9ULM0 1364 aa13.47□□□□□ -0.25
ABCF1-205ENST00000475993 TBC1D2Q9BYX2 928 aa13.47□□□□□ -0.25
ABCF1-205ENST00000475993 MYH16Q9H6N6 1097 aa13.47□□□□□ -0.25
ABCF1-205ENST00000475993 ISY1Q9ULR0 285 aaKnown RBP13.47□□□□□ -0.25
ABCF1-205ENST00000475993 GZF1Q9H116 711 aaPredicted RBP13.46□□□□□ -0.25
ABCF1-205ENST00000475993 PKD2Q13563 968 aa13.46□□□□□ -0.25
ABCF1-205ENST00000475993 DHX37Q8IY37 1157 aaKnown RBP13.46□□□□□ -0.25
ABCF1-205ENST00000475993 CDK13Q14004 1512 aaKnown RBP13.46□□□□□ -0.25
ABCF1-205ENST00000475993 IGHDP01880 384 aa13.46□□□□□ -0.26
ABCF1-205ENST00000475993 GRPEL1Q9HAV7 217 aa13.46□□□□□ -0.26
ABCF1-205ENST00000475993 TRAK2O60296 914 aa13.45□□□□□ -0.26
ABCF1-205ENST00000475993 TBC1D32Q96NH3 1257 aa13.45□□□□□ -0.26
ABCF1-205ENST00000475993 KIAA0586Q9BVV6 1533 aa13.45□□□□□ -0.26
ABCF1-205ENST00000475993 ADAMTS8Q9UP79 889 aa13.44□□□□□ -0.26
ABCF1-205ENST00000475993 GOLGA2Q08379 1002 aa13.44□□□□□ -0.26
ABCF1-205ENST00000475993 ZNF644Q9H582 1327 aaPredicted RBP13.43□□□□□ -0.26
ABCF1-205ENST00000475993 VGLL3A8MV65 326 aa13.43□□□□□ -0.26
ABCF1-205ENST00000475993 CC2D1BQ5T0F9 858 aaKnown RBP13.43□□□□□ -0.26
ABCF1-205ENST00000475993 PRDM10Q9NQV6 1147 aa13.43□□□□□ -0.26
ABCF1-205ENST00000475993 CLASP1Q7Z460 1538 aa13.43□□□□□ -0.26
ABCF1-205ENST00000475993 ARID3AQ99856 593 aa13.42□□□□□ -0.26
ABCF1-205ENST00000475993 TRMT2AQ8IZ69 625 aaKnown RBP13.42□□□□□ -0.26
ABCF1-205ENST00000475993 ZMYM3Q14202 1370 aa13.42□□□□□ -0.26
ABCF1-205ENST00000475993 SLFN5Q08AF3 891 aa13.42□□□□□ -0.26
ABCF1-205ENST00000475993 ADGBQ8N7X0 1667 aa13.42□□□□□ -0.26
ABCF1-205ENST00000475993 NCBP3Q53F19 620 aaKnown RBP13.41□□□□□ -0.26
ABCF1-205ENST00000475993 WDR62O43379 1518 aa13.41□□□□□ -0.26
ABCF1-205ENST00000475993 SMAP1Q8IYB5 467 aaPredicted RBP13.41□□□□□ -0.26
ABCF1-205ENST00000475993 UPF2Q9HAU5 1272 aaKnown RBP13.41□□□□□ -0.26
ABCF1-205ENST00000475993 CHMP5Q9NZZ3 219 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms