RNA–Protein interactions for RNA: ENST00000474064.5

RNF220-209, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 2,734 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-209ENST00000474064 FKBP8Q14318 412 aa29.37■■■□□ 2.29
RNF220-209ENST00000474064 SCAPERQ9BY12 1400 aa29.35■■■□□ 2.29
RNF220-209ENST00000474064 ADGRL1O94910 1474 aa29.35■■■□□ 2.29
RNF220-209ENST00000474064 CCDC144AA2RUR9 1427 aa29.34■■■□□ 2.29
RNF220-209ENST00000474064 RGL3Q3MIN7 710 aa29.34■■■□□ 2.29
RNF220-209ENST00000474064 ZFYVE16Q7Z3T8 1539 aa29.33■■■□□ 2.29
RNF220-209ENST00000474064 RBM19Q9Y4C8 960 aaKnown RBP29.32■■■□□ 2.28
RNF220-209ENST00000474064 SPATA31E1Q6ZUB1 1445 aa29.32■■■□□ 2.28
RNF220-209ENST00000474064 RTEL1-TNFRSF6BF6WH68 1400 aa29.31■■■□□ 2.28
RNF220-209ENST00000474064 IQGAP3Q86VI3 1631 aa29.31■■■□□ 2.28
RNF220-209ENST00000474064 PLA2R1Q13018 1463 aa29.3■■■□□ 2.28
RNF220-209ENST00000474064 CCDC7Q96M83 1385 aa29.29■■■□□ 2.28
RNF220-209ENST00000474064 USP47Q96K76 1375 aa29.28■■■□□ 2.28
RNF220-209ENST00000474064 MAGI2Q86UL8 1455 aa29.26■■■□□ 2.27
RNF220-209ENST00000474064 UHRF1BP1Q6BDS2 1440 aa29.25■■■□□ 2.27
RNF220-209ENST00000474064 ATP7AQ04656 1500 aa29.25■■■□□ 2.27
RNF220-209ENST00000474064 CCER2I3L3R5 266 aa29.25■■■□□ 2.27
RNF220-209ENST00000474064 CARD11Q9BXL7 1154 aa29.25■■■□□ 2.27
RNF220-209ENST00000474064 KIF7Q2M1P5 1343 aa29.24■■■□□ 2.27
RNF220-209ENST00000474064 CD109Q6YHK3 1445 aa29.23■■■□□ 2.27
RNF220-209ENST00000474064 POLR3GLQ9BT43 218 aa29.22■■■□□ 2.27
RNF220-209ENST00000474064 KIF3BO15066 747 aa29.22■■■□□ 2.27
RNF220-209ENST00000474064 CNTLNQ9NXG0 1405 aa29.2■■■□□ 2.26
RNF220-209ENST00000474064 RALGAPBQ86X10 1494 aa29.19■■■□□ 2.26
RNF220-209ENST00000474064 CYB5RLQ6IPT4 315 aa29.19■■■□□ 2.26
RNF220-209ENST00000474064 INO80Q9ULG1 1556 aaPredicted RBP29.19■■■□□ 2.26
RNF220-209ENST00000474064 KDM5CP41229 1560 aa29.13■■■□□ 2.25
RNF220-209ENST00000474064 ROCK2O75116 1388 aaKnown RBP29.13■■■□□ 2.25
RNF220-209ENST00000474064 DHX29Q7Z478 1369 aaKnown RBP29.12■■■□□ 2.25
RNF220-209ENST00000474064 A2MP01023 1474 aa29.12■■■□□ 2.25
RNF220-209ENST00000474064 ZNF518AQ6AHZ1 1483 aa29.1■■■□□ 2.25
RNF220-209ENST00000474064 NEFLP07196 543 aa29.1■■■□□ 2.25
RNF220-209ENST00000474064 PRAG1Q86YV5 1406 aa29.1■■■□□ 2.25
RNF220-209ENST00000474064 BCORL1Q5H9F3 1711 aa29.09■■■□□ 2.25
RNF220-209ENST00000474064 ST20-MTHFSA0A0A6YYL1 179 aa29.09■■■□□ 2.25
RNF220-209ENST00000474064 KANK1Q14678 1352 aa29.09■■■□□ 2.25
RNF220-209ENST00000474064 ATP10AO60312 1499 aa29.09■■■□□ 2.25
RNF220-209ENST00000474064 E9PCH4 1651 aa29.08■■■□□ 2.25
RNF220-209ENST00000474064 NBPF1Q3BBV0 1214 aa29.08■■■□□ 2.25
RNF220-209ENST00000474064 CNGB1Q14028 1251 aaPredicted RBP29.06■■■□□ 2.24
RNF220-209ENST00000474064 KIDINS220Q9ULH0 1771 aa29.06■■■□□ 2.24
RNF220-209ENST00000474064 MSH5O43196 834 aa29.05■■■□□ 2.24
RNF220-209ENST00000474064 DEPDC5O75140 1603 aa29.05■■■□□ 2.24
RNF220-209ENST00000474064 POLR1AO95602 1720 aaPredicted RBP29.03■■■□□ 2.24
RNF220-209ENST00000474064 POGZQ7Z3K3 1410 aa29.03■■■□□ 2.24
RNF220-209ENST00000474064 RAPGEF3O95398 923 aa29.03■■■□□ 2.24
RNF220-209ENST00000474064 PRKRIP1Q9H875 184 aaPredicted RBP29.01■■■□□ 2.24
RNF220-209ENST00000474064 CFAP74Q9C0B2 1584 aa28.99■■■□□ 2.23
RNF220-209ENST00000474064 CCDC184Q52MB2 194 aa28.99■■■□□ 2.23
RNF220-209ENST00000474064 TRPM1Q7Z4N2 1603 aa28.98■■■□□ 2.23
RNF220-209ENST00000474064 TET3O43151 1660 aa28.97■■■□□ 2.23
RNF220-209ENST00000474064 TRPM2O94759 1503 aa28.96■■■□□ 2.23
RNF220-209ENST00000474064 MROH1Q8NDA8 1641 aa28.95■■■□□ 2.23
RNF220-209ENST00000474064 EIF2AK4Q9P2K8 1649 aaKnown RBP28.95■■■□□ 2.23
RNF220-209ENST00000474064 GGT6Q6P531 493 aa28.95■■■□□ 2.23
RNF220-209ENST00000474064 VWDEQ8N2E2 1590 aa28.95■■■□□ 2.23
RNF220-209ENST00000474064 PTPRTO14522 1441 aa28.94■■■□□ 2.22
RNF220-209ENST00000474064 PRDM15P57071 1507 aaPredicted RBP28.94■■■□□ 2.22
RNF220-209ENST00000474064 SPHKAPQ2M3C7 1700 aa28.94■■■□□ 2.22
RNF220-209ENST00000474064 RIMBP3CA6NJZ7 1639 aa28.92■■■□□ 2.22
RNF220-209ENST00000474064 RIMBP3BA6NNM3 1639 aa28.92■■■□□ 2.22
RNF220-209ENST00000474064 RIMBP3Q9UFD9 1639 aa28.92■■■□□ 2.22
RNF220-209ENST00000474064 ARID4BQ4LE39 1312 aaPredicted RBP28.92■■■□□ 2.22
RNF220-209ENST00000474064 CLTCL1P53675 1640 aa28.91■■■□□ 2.22
RNF220-209ENST00000474064 MLH3Q9UHC1 1453 aa28.91■■■□□ 2.22
RNF220-209ENST00000474064 NEO1Q92859 1461 aa28.89■■■□□ 2.22
RNF220-209ENST00000474064 HECW2Q9P2P5 1572 aa28.89■■■□□ 2.22
RNF220-209ENST00000474064 GPRASP1Q5JY77 1395 aa28.88■■■□□ 2.21
RNF220-209ENST00000474064 MRS2Q9HD23 443 aa28.87■■■□□ 2.21
RNF220-209ENST00000474064 UGGT1Q9NYU2 1555 aa28.86■■■□□ 2.21
RNF220-209ENST00000474064 HNRNPUQ00839 825 aaKnown RBP eCLIP28.86■■■□□ 2.21
RNF220-209ENST00000474064 FAM69CQ0P6D2 419 aa28.85■■■□□ 2.21
RNF220-209ENST00000474064 FRMPD1Q5SYB0 1578 aa28.85■■■□□ 2.21
RNF220-209ENST00000474064 FAM9BQ8IZU0 186 aa28.84■■■□□ 2.21
RNF220-209ENST00000474064 ABCA6Q8N139 1617 aa28.83■■■□□ 2.21
RNF220-209ENST00000474064 CEP152O94986 1710 aa28.83■■■□□ 2.21
RNF220-209ENST00000474064 EFCAB6Q5THR3 1501 aa28.82■■■□□ 2.2
RNF220-209ENST00000474064 PPRC1Q5VV67 1664 aaKnown RBP28.81■■■□□ 2.2
RNF220-209ENST00000474064 MAP3K4Q9Y6R4 1608 aa28.79■■■□□ 2.2
RNF220-209ENST00000474064 WASHC2CQ9Y4E1 1318 aa28.79■■■□□ 2.2
RNF220-209ENST00000474064 CHGAP10645 457 aaKnown RBP28.78■■■□□ 2.2
RNF220-209ENST00000474064 FANCIQ9NVI1 1328 aa28.78■■■□□ 2.2
RNF220-209ENST00000474064 ERICH6Q7L0X2 663 aa28.78■■■□□ 2.2
RNF220-209ENST00000474064 RNF17Q9BXT8 1623 aaKnown RBP28.77■■■□□ 2.2
RNF220-209ENST00000474064 TESK2Q96S53 571 aa28.77■■■□□ 2.2
RNF220-209ENST00000474064 MADDQ8WXG6 1647 aa28.77■■■□□ 2.2
RNF220-209ENST00000474064 DISP3Q9P2K9 1392 aa28.74■■■□□ 2.19
RNF220-209ENST00000474064 LMTK2Q8IWU2 1503 aa28.74■■■□□ 2.19
RNF220-209ENST00000474064 LAMC1P11047 1609 aa28.74■■■□□ 2.19
RNF220-209ENST00000474064 CFAP65Q6ZU64 1925 aaKnown RBP28.74■■■□□ 2.19
RNF220-209ENST00000474064 NPATQ14207 1427 aa28.73■■■□□ 2.19
RNF220-209ENST00000474064 YEATS2Q9ULM3 1422 aa28.73■■■□□ 2.19
RNF220-209ENST00000474064 DIP2CQ9Y2E4 1556 aa28.71■■■□□ 2.19
RNF220-209ENST00000474064 RICTORQ6R327 1708 aa28.7■■■□□ 2.18
RNF220-209ENST00000474064 GLI2P10070 1586 aa28.7■■■□□ 2.18
RNF220-209ENST00000474064 STAC3Q96MF2 364 aa28.69■■■□□ 2.18
RNF220-209ENST00000474064 ADGRF5Q8IZF2 1346 aa28.69■■■□□ 2.18
RNF220-209ENST00000474064 TMF1P82094 1093 aa28.68■■■□□ 2.18
RNF220-209ENST00000474064 COL17A1Q9UMD9 1497 aaPredicted RBP28.68■■■□□ 2.18
RNF220-209ENST00000474064 CFAP70Q5T0N1 1121 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms