RNA–Protein interactions for RNA: ENST00000473101.1

RGPD6-208, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 4

Gene RGPD6, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-208ENST00000473101 HCSTQ9UBK5 93 aa7.57□□□□□ -1.2
RGPD6-208ENST00000473101 ZBED2Q9BTP6 218 aa7.56□□□□□ -1.2
RGPD6-208ENST00000473101 SLC4A5Q9BY07 1137 aa7.55□□□□□ -1.2
RGPD6-208ENST00000473101 TYW1BQ6NUM6 668 aa7.54□□□□□ -1.2
RGPD6-208ENST00000473101 PHF14O94880 888 aa7.53□□□□□ -1.2
RGPD6-208ENST00000473101 PTPN5P54829 565 aa7.53□□□□□ -1.2
RGPD6-208ENST00000473101 DDX12PQ92771 950 aa7.53□□□□□ -1.2
RGPD6-208ENST00000473101 GOLGA8CPA6NN73 597 aa7.52□□□□□ -1.21
RGPD6-208ENST00000473101 PPP1R3GB7ZBB8 358 aa7.52□□□□□ -1.21
RGPD6-208ENST00000473101 COL9A1P20849 921 aa7.52□□□□□ -1.21
RGPD6-208ENST00000473101 PROX2Q3B8N5 592 aa7.52□□□□□ -1.21
RGPD6-208ENST00000473101 MRPL50Q8N5N7 158 aaKnown RBP7.52□□□□□ -1.21
RGPD6-208ENST00000473101 FBXW7Q969H0 707 aa7.52□□□□□ -1.21
RGPD6-208ENST00000473101 RBM33Q96EV2 1170 aaKnown RBP7.52□□□□□ -1.21
RGPD6-208ENST00000473101 BHMG1C9JSJ3 638 aaPredicted RBP7.51□□□□□ -1.21
RGPD6-208ENST00000473101 WDR70Q9NW82 654 aa7.51□□□□□ -1.21
RGPD6-208ENST00000473101 PLA2G2EQ9NZK7 142 aa7.51□□□□□ -1.21
RGPD6-208ENST00000473101 EPAS1Q99814 870 aa7.5□□□□□ -1.21
RGPD6-208ENST00000473101 NBPF3Q9H094 633 aa7.5□□□□□ -1.21
RGPD6-208ENST00000473101 E2F4Q16254 413 aa7.49□□□□□ -1.21
RGPD6-208ENST00000473101 C6orf132Q5T0Z8 1188 aa7.48□□□□□ -1.21
RGPD6-208ENST00000473101 WNT2BQ93097 391 aa7.48□□□□□ -1.21
RGPD6-208ENST00000473101 PDIA6Q15084 440 aa7.47□□□□□ -1.21
RGPD6-208ENST00000473101 THSD4Q6ZMP0 1018 aa7.47□□□□□ -1.21
RGPD6-208ENST00000473101 MAP3K7O43318 606 aa7.46□□□□□ -1.22
RGPD6-208ENST00000473101 RABGEF1Q9UJ41 708 aa7.46□□□□□ -1.22
RGPD6-208ENST00000473101 SPDYE16A6NNV3 312 aaPredicted RBP7.45□□□□□ -1.22
RGPD6-208ENST00000473101 P3H3Q8IVL6 736 aa7.45□□□□□ -1.22
RGPD6-208ENST00000473101 KIAA1468Q9P260 1216 aa7.45□□□□□ -1.22
RGPD6-208ENST00000473101 GRXCR2A6NFK2 248 aa7.44□□□□□ -1.22
RGPD6-208ENST00000473101 TSR1Q2NL82 804 aaKnown RBP7.44□□□□□ -1.22
RGPD6-208ENST00000473101 EN1Q05925 392 aaPredicted RBP7.43□□□□□ -1.22
RGPD6-208ENST00000473101 ANKK1Q8NFD2 765 aa7.43□□□□□ -1.22
RGPD6-208ENST00000473101 SEPT9Q9UHD8 586 aaPredicted RBP7.43□□□□□ -1.22
RGPD6-208ENST00000473101 TRIM6-TRIM34B2RNG4 842 aa7.41□□□□□ -1.22
RGPD6-208ENST00000473101 BCAMP50895 628 aa7.41□□□□□ -1.22
RGPD6-208ENST00000473101 PRIM1P49642 420 aaKnown RBP7.4□□□□□ -1.22
RGPD6-208ENST00000473101 LAPTM4BQ86VI4 370 aa7.39□□□□□ -1.23
RGPD6-208ENST00000473101 ZFRQ96KR1 1074 aaKnown RBP7.39□□□□□ -1.23
RGPD6-208ENST00000473101 ARIH1Q9Y4X5 557 aaPredicted RBP7.39□□□□□ -1.23
RGPD6-208ENST00000473101 ONECUT3O60422 494 aaPredicted RBP7.38□□□□□ -1.23
RGPD6-208ENST00000473101 SOWAHBA6NEL2 793 aa7.37□□□□□ -1.23
RGPD6-208ENST00000473101 FAM98CQ17RN3 349 aaKnown RBP7.37□□□□□ -1.23
RGPD6-208ENST00000473101 PACS2Q86VP3 889 aa7.37□□□□□ -1.23
RGPD6-208ENST00000473101 TSKSQ9UJT2 592 aa7.37□□□□□ -1.23
RGPD6-208ENST00000473101 CDHR5Q9HBB8 845 aa7.36□□□□□ -1.23
RGPD6-208ENST00000473101 SMAPO00193 183 aa7.35□□□□□ -1.23
RGPD6-208ENST00000473101 OSBPP22059 807 aa7.35□□□□□ -1.23
RGPD6-208ENST00000473101 CDCA7LQ96GN5 454 aa7.35□□□□□ -1.23
RGPD6-208ENST00000473101 PRSS12P56730 875 aa7.34□□□□□ -1.23
RGPD6-208ENST00000473101 KCNV2Q8TDN2 545 aa7.34□□□□□ -1.23
RGPD6-208ENST00000473101 LRCH3Q96II8 777 aa7.34□□□□□ -1.23
RGPD6-208ENST00000473101 IRX2Q9BZI1 471 aaPredicted RBP7.34□□□□□ -1.23
RGPD6-208ENST00000473101 WBP1LQ9NX94 342 aa7.34□□□□□ -1.23
RGPD6-208ENST00000473101 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.33□□□□□ -1.24
RGPD6-208ENST00000473101 FAM198AQ9UFP1 575 aa7.33□□□□□ -1.24
RGPD6-208ENST00000473101 TULP1O00294 542 aaPredicted RBP7.32□□□□□ -1.24
RGPD6-208ENST00000473101 CERKQ8TCT0 537 aa7.32□□□□□ -1.24
RGPD6-208ENST00000473101 HPS5Q9UPZ3 1129 aa7.32□□□□□ -1.24
RGPD6-208ENST00000473101 C3orf80F5H4A9 247 aa7.31□□□□□ -1.24
RGPD6-208ENST00000473101 PNMA3Q9UL41 463 aa7.31□□□□□ -1.24
RGPD6-208ENST00000473101 NBPF26B4DH59 902 aa7.3□□□□□ -1.24
RGPD6-208ENST00000473101 MLLT3P42568 568 aaPredicted RBP7.3□□□□□ -1.24
RGPD6-208ENST00000473101 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.3□□□□□ -1.24
RGPD6-208ENST00000473101 ARHGEF1Q92888 912 aaKnown RBP7.3□□□□□ -1.24
RGPD6-208ENST00000473101 TSR3Q9UJK0 312 aaKnown RBP7.3□□□□□ -1.24
RGPD6-208ENST00000473101 LMOD2Q6P5Q4 547 aa7.29□□□□□ -1.24
RGPD6-208ENST00000473101 SAMD7Q7Z3H4 446 aa7.29□□□□□ -1.24
RGPD6-208ENST00000473101 TATDN2Q93075 761 aa7.29□□□□□ -1.24
RGPD6-208ENST00000473101 GTF3C3Q9Y5Q9 886 aa7.29□□□□□ -1.24
RGPD6-208ENST00000473101 A0A0G2JS52 829 aa7.28□□□□□ -1.24
RGPD6-208ENST00000473101 TMEM132AQ24JP5 1023 aa7.28□□□□□ -1.24
RGPD6-208ENST00000473101 IFFO2Q5TF58 517 aa7.28□□□□□ -1.24
RGPD6-208ENST00000473101 NYAP1Q6ZVC0 841 aa7.28□□□□□ -1.24
RGPD6-208ENST00000473101 NUDT18Q6ZVK8 323 aa7.28□□□□□ -1.24
RGPD6-208ENST00000473101 RNF40O75150 1001 aa7.27□□□□□ -1.25
RGPD6-208ENST00000473101 ITGBL1O95965 494 aaPredicted RBP7.27□□□□□ -1.25
RGPD6-208ENST00000473101 PPP4CP60510 307 aa7.27□□□□□ -1.25
RGPD6-208ENST00000473101 PADI6Q6TGC4 694 aa7.27□□□□□ -1.25
RGPD6-208ENST00000473101 ERICH6Q7L0X2 663 aa7.26□□□□□ -1.25
RGPD6-208ENST00000473101 NPDC1Q9NQX5 325 aaPredicted RBP7.26□□□□□ -1.25
RGPD6-208ENST00000473101 RBM27Q9P2N5 1060 aaKnown RBP7.25□□□□□ -1.25
RGPD6-208ENST00000473101 KCNC4Q03721 635 aa7.24□□□□□ -1.25
RGPD6-208ENST00000473101 HDGFP51858 240 aaKnown RBP7.23□□□□□ -1.25
RGPD6-208ENST00000473101 TIMELESSQ9UNS1 1208 aa7.23□□□□□ -1.25
RGPD6-208ENST00000473101 NUTM2FA1L443 756 aa7.22□□□□□ -1.25
RGPD6-208ENST00000473101 TTC13Q8NBP0 860 aa7.22□□□□□ -1.25
RGPD6-208ENST00000473101 SEMA3EO15041 775 aa7.21□□□□□ -1.26
RGPD6-208ENST00000473101 RGS20O76081 388 aa7.2□□□□□ -1.26
RGPD6-208ENST00000473101 SWT1Q5T5J6 900 aaKnown RBP7.2□□□□□ -1.26
RGPD6-208ENST00000473101 PTGDRQ13258 359 aa7.19□□□□□ -1.26
RGPD6-208ENST00000473101 TESPA1A2RU30 521 aaPredicted RBP7.18□□□□□ -1.26
RGPD6-208ENST00000473101 APLP1P51693 650 aa7.18□□□□□ -1.26
RGPD6-208ENST00000473101 ZC3H15Q8WU90 426 aaKnown RBP7.18□□□□□ -1.26
RGPD6-208ENST00000473101 FAM161AQ3B820 660 aa7.17□□□□□ -1.26
RGPD6-208ENST00000473101 TJAP1Q5JTD0 557 aa7.17□□□□□ -1.26
RGPD6-208ENST00000473101 SMYD5Q6GMV2 418 aa7.17□□□□□ -1.26
RGPD6-208ENST00000473101 EYA1Q99502 592 aa7.17□□□□□ -1.26
RGPD6-208ENST00000473101 MTRQ99707 1265 aa7.17□□□□□ -1.26
RGPD6-208ENST00000473101 SLC4A3P48751 1232 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms