RNA–Protein interactions for RNA: ENST00000473101.1

RGPD6-208, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 4

Gene RGPD6, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-208ENST00000473101 AEBP2Q6ZN18 517 aaPredicted RBP18.13■□□□□ 0.49
RGPD6-208ENST00000473101 CHIC1Q5VXU3 224 aa17.31■□□□□ 0.36
RGPD6-208ENST00000473101 SENP3Q9H4L4 574 aaPredicted RBP15.44■□□□□ 0.06
RGPD6-208ENST00000473101 PHF23Q9BUL5 403 aaPredicted RBP15.27■□□□□ 0.04
RGPD6-208ENST00000473101 POTEDQ86YR6 584 aa14.78□□□□□ -0.04
RGPD6-208ENST00000473101 FOXD1Q16676 465 aa14.39□□□□□ -0.11
RGPD6-208ENST00000473101 PLPPR3Q6T4P5 718 aa13.89□□□□□ -0.19
RGPD6-208ENST00000473101 PPP6R1Q9UPN7 881 aa13.55□□□□□ -0.24
RGPD6-208ENST00000473101 ADRA2BP18089 450 aa13.54□□□□□ -0.24
RGPD6-208ENST00000473101 MSH5O43196 834 aa13.53□□□□□ -0.24
RGPD6-208ENST00000473101 PIAS4Q8N2W9 510 aaPredicted RBP13.5□□□□□ -0.25
RGPD6-208ENST00000473101 MAPK8IP2Q13387 824 aaPredicted RBP12.4□□□□□ -0.42
RGPD6-208ENST00000473101 SCAF1Q9H7N4 1312 aaKnown RBP12.35□□□□□ -0.43
RGPD6-208ENST00000473101 DMRT2Q9Y5R5 561 aa12.26□□□□□ -0.45
RGPD6-208ENST00000473101 CACNB1Q02641 598 aaPredicted RBP12.22□□□□□ -0.45
RGPD6-208ENST00000473101 PPP4R3CPQ6ZMV5 832 aa12.21□□□□□ -0.45
RGPD6-208ENST00000473101 CNKSR2Q8WXI2 1034 aa11.93□□□□□ -0.5
RGPD6-208ENST00000473101 DCAF8L1A6NGE4 600 aa11.84□□□□□ -0.51
RGPD6-208ENST00000473101 HOXD11P31277 338 aaPredicted RBP11.83□□□□□ -0.52
RGPD6-208ENST00000473101 RNF216Q9NWF9 866 aaPredicted RBP11.78□□□□□ -0.52
RGPD6-208ENST00000473101 NCBP3Q53F19 620 aaKnown RBP11.76□□□□□ -0.53
RGPD6-208ENST00000473101 NPM3O75607 178 aaKnown RBP11.6□□□□□ -0.55
RGPD6-208ENST00000473101 KCNA4P22459 653 aa11.5□□□□□ -0.57
RGPD6-208ENST00000473101 RNF39Q9H2S5 420 aa11.44□□□□□ -0.58
RGPD6-208ENST00000473101 POTEHQ6S545 545 aa11.42□□□□□ -0.58
RGPD6-208ENST00000473101 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.34□□□□□ -0.59
RGPD6-208ENST00000473101 DNAJC5BQ9UF47 199 aa11.34□□□□□ -0.59
RGPD6-208ENST00000473101 C1QBPQ07021 282 aaKnown RBP11.28□□□□□ -0.6
RGPD6-208ENST00000473101 U3KPZ7 1027 aaPredicted RBP11.1□□□□□ -0.63
RGPD6-208ENST00000473101 SLC4A2P04920 1241 aa11.04□□□□□ -0.64
RGPD6-208ENST00000473101 SPINK5Q9NQ38 1064 aaPredicted RBP10.92□□□□□ -0.66
RGPD6-208ENST00000473101 CAPN15O75808 1086 aa10.91□□□□□ -0.66
RGPD6-208ENST00000473101 SLC4A1APQ9BWU0 796 aaKnown RBP10.89□□□□□ -0.67
RGPD6-208ENST00000473101 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.79□□□□□ -0.68
RGPD6-208ENST00000473101 HNRNPUL2Q1KMD3 747 aaKnown RBP10.79□□□□□ -0.68
RGPD6-208ENST00000473101 TRHP20396 242 aaPredicted RBP10.77□□□□□ -0.69
RGPD6-208ENST00000473101 DSG3P32926 999 aa10.77□□□□□ -0.69
RGPD6-208ENST00000473101 APLP2Q06481 763 aa10.77□□□□□ -0.69
RGPD6-208ENST00000473101 SAMD1Q6SPF0 538 aaPredicted RBP10.75□□□□□ -0.69
RGPD6-208ENST00000473101 MYCNP04198 464 aaPredicted RBP10.72□□□□□ -0.69
RGPD6-208ENST00000473101 ZNF219Q9P2Y4 722 aaPredicted RBP10.7□□□□□ -0.7
RGPD6-208ENST00000473101 FOXD4L1Q9NU39 408 aa10.68□□□□□ -0.7
RGPD6-208ENST00000473101 ABCB7O75027 752 aa10.67□□□□□ -0.7
RGPD6-208ENST00000473101 ZBTB22O15209 634 aa10.57□□□□□ -0.72
RGPD6-208ENST00000473101 POLA2Q14181 598 aa10.48□□□□□ -0.73
RGPD6-208ENST00000473101 ATF5Q9Y2D1 282 aaPredicted RBP10.48□□□□□ -0.73
RGPD6-208ENST00000473101 ATXN8OSP0DMR3 200 aa10.29□□□□□ -0.76
RGPD6-208ENST00000473101 RBM42Q9BTD8 480 aaKnown RBP10.27□□□□□ -0.77
RGPD6-208ENST00000473101 SP7Q8TDD2 431 aaPredicted RBP10.26□□□□□ -0.77
RGPD6-208ENST00000473101 ZBTB12Q9Y330 459 aaPredicted RBP10.23□□□□□ -0.77
RGPD6-208ENST00000473101 EHMT2Q96KQ7 1210 aa10.21□□□□□ -0.77
RGPD6-208ENST00000473101 CSRNP3Q8WYN3 585 aa10.18□□□□□ -0.78
RGPD6-208ENST00000473101 OSCARQ8IYS5 282 aa10.16□□□□□ -0.78
RGPD6-208ENST00000473101 CHRDL2Q6WN34 429 aa10.13□□□□□ -0.79
RGPD6-208ENST00000473101 FBLN2P98095 1184 aa10.07□□□□□ -0.8
RGPD6-208ENST00000473101 AKT1S1Q96B36 256 aa10.05□□□□□ -0.8
RGPD6-208ENST00000473101 MKRN4PQ13434 485 aaPredicted RBP10□□□□□ -0.81
RGPD6-208ENST00000473101 REM2Q8IYK8 340 aaPredicted RBP9.98□□□□□ -0.81
RGPD6-208ENST00000473101 SPDYE2BA6NHP3 402 aa9.93□□□□□ -0.82
RGPD6-208ENST00000473101 SPDYE6P0CI01 402 aa9.93□□□□□ -0.82
RGPD6-208ENST00000473101 SPDYE2Q495Y8 402 aa9.93□□□□□ -0.82
RGPD6-208ENST00000473101 PLSCR2Q9NRY7 297 aa9.89□□□□□ -0.83
RGPD6-208ENST00000473101 PITPNM1O00562 1244 aa9.88□□□□□ -0.83
RGPD6-208ENST00000473101 ZNF692Q9BU19 519 aaPredicted RBP9.87□□□□□ -0.83
RGPD6-208ENST00000473101 HAX1O00165 279 aa9.8□□□□□ -0.84
RGPD6-208ENST00000473101 PIP4P2Q8N4L2 257 aa9.8□□□□□ -0.84
RGPD6-208ENST00000473101 SSUH2Q9Y2M2 353 aa9.8□□□□□ -0.84
RGPD6-208ENST00000473101 CLEC11AQ9Y240 323 aa9.78□□□□□ -0.84
RGPD6-208ENST00000473101 SPDYE1Q8NFV5 336 aaPredicted RBP9.75□□□□□ -0.85
RGPD6-208ENST00000473101 PABPN1Q86U42 306 aaKnown RBP eCLIP9.74□□□□□ -0.85
RGPD6-208ENST00000473101 FXR2P51116 673 aaKnown RBP eCLIP9.73□□□□□ -0.85
RGPD6-208ENST00000473101 PRKAR2AP13861 404 aaKnown RBP9.63□□□□□ -0.87
RGPD6-208ENST00000473101 LHX8Q68G74 356 aa9.62□□□□□ -0.87
RGPD6-208ENST00000473101 SPDYE4A6NLX3 237 aa9.6□□□□□ -0.87
RGPD6-208ENST00000473101 PRR29P0C7W0 189 aa9.6□□□□□ -0.87
RGPD6-208ENST00000473101 CHADLQ6NUI6 762 aa9.57□□□□□ -0.88
RGPD6-208ENST00000473101 EVX2Q03828 476 aa9.54□□□□□ -0.88
RGPD6-208ENST00000473101 STAG3Q9UJ98 1225 aa9.45□□□□□ -0.9
RGPD6-208ENST00000473101 C19orf67A6NJJ6 358 aa9.43□□□□□ -0.9
RGPD6-208ENST00000473101 FARP1Q9Y4F1 1045 aaPredicted RBP9.41□□□□□ -0.9
RGPD6-208ENST00000473101 CREBZFQ9NS37 354 aa9.37□□□□□ -0.91
RGPD6-208ENST00000473101 CD44P16070 742 aaKnown RBP9.34□□□□□ -0.91
RGPD6-208ENST00000473101 PROM2Q8N271 834 aa9.31□□□□□ -0.92
RGPD6-208ENST00000473101 GABBR2O75899 941 aa9.29□□□□□ -0.92
RGPD6-208ENST00000473101 FKBP8Q14318 412 aa9.27□□□□□ -0.93
RGPD6-208ENST00000473101 ZRANB1Q9UGI0 708 aa9.23□□□□□ -0.93
RGPD6-208ENST00000473101 NPM1P06748 294 aaKnown RBP eCLIP9.2□□□□□ -0.94
RGPD6-208ENST00000473101 MNX1P50219 401 aaPredicted RBP9.2□□□□□ -0.94
RGPD6-208ENST00000473101 PAK3O75914 559 aaPredicted RBP9.17□□□□□ -0.94
RGPD6-208ENST00000473101 MIER1Q8N108 512 aa9.16□□□□□ -0.94
RGPD6-208ENST00000473101 ZNF579Q8NAF0 562 aaKnown RBP9.16□□□□□ -0.94
RGPD6-208ENST00000473101 POTEMA6NI47 508 aa9.13□□□□□ -0.95
RGPD6-208ENST00000473101 PLEKHG5O94827 1062 aa9.13□□□□□ -0.95
RGPD6-208ENST00000473101 PHF12Q96QT6 1004 aa9.13□□□□□ -0.95
RGPD6-208ENST00000473101 PLCD3Q8N3E9 789 aa9.11□□□□□ -0.95
RGPD6-208ENST00000473101 CLCN6P51797 869 aa9.1□□□□□ -0.95
RGPD6-208ENST00000473101 TSPYL2Q9H2G4 693 aaPredicted RBP9.09□□□□□ -0.95
RGPD6-208ENST00000473101 GALR2O43603 387 aaPredicted RBP9.08□□□□□ -0.96
RGPD6-208ENST00000473101 POTEIP0CG38 1075 aa9.08□□□□□ -0.96
RGPD6-208ENST00000473101 DCBLD2Q96PD2 775 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms