RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 STRN4Q9NRL3 753 aa10.82□□□□□ -0.68
CD47-204ENST00000471694 TEFQ10587 303 aa10.82□□□□□ -0.68
CD47-204ENST00000471694 ARHGAP35Q9NRY4 1499 aa10.82□□□□□ -0.68
CD47-204ENST00000471694 DCAF1Q9Y4B6 1507 aa10.8□□□□□ -0.68
CD47-204ENST00000471694 SIN3AQ96ST3 1273 aa10.8□□□□□ -0.68
CD47-204ENST00000471694 NOC3LQ8WTT2 800 aaKnown RBP10.79□□□□□ -0.68
CD47-204ENST00000471694 DHX16O60231 1041 aaKnown RBP10.79□□□□□ -0.68
CD47-204ENST00000471694 LMOD3Q0VAK6 560 aa10.79□□□□□ -0.68
CD47-204ENST00000471694 TRIM6-TRIM34B2RNG4 842 aa10.79□□□□□ -0.68
CD47-204ENST00000471694 L1TD1Q5T7N2 865 aaKnown RBP10.79□□□□□ -0.68
CD47-204ENST00000471694 ITPRIPQ8IWB1 547 aa10.79□□□□□ -0.68
CD47-204ENST00000471694 CFAP44Q96MT7 982 aa10.78□□□□□ -0.68
CD47-204ENST00000471694 RAPGEF4Q8WZA2 1011 aa10.78□□□□□ -0.68
CD47-204ENST00000471694 MINK1Q8N4C8 1332 aaPredicted RBP10.78□□□□□ -0.68
CD47-204ENST00000471694 VGFO15240 615 aaPredicted RBP10.78□□□□□ -0.68
CD47-204ENST00000471694 NLRP2Q9NX02 1062 aa10.78□□□□□ -0.68
CD47-204ENST00000471694 CREBRFQ8IUR6 639 aa10.78□□□□□ -0.68
CD47-204ENST00000471694 RSPH4AQ5TD94 716 aa10.78□□□□□ -0.68
CD47-204ENST00000471694 CEP89Q96ST8 783 aa10.77□□□□□ -0.68
CD47-204ENST00000471694 ESCO1Q5FWF5 840 aa10.77□□□□□ -0.69
CD47-204ENST00000471694 NUTM2GQ5VZR2 741 aa10.77□□□□□ -0.69
CD47-204ENST00000471694 EIF2S2P20042 333 aaKnown RBP10.76□□□□□ -0.69
CD47-204ENST00000471694 NEXNQ0ZGT2 675 aa10.76□□□□□ -0.69
CD47-204ENST00000471694 DRC7Q8IY82 874 aa10.76□□□□□ -0.69
CD47-204ENST00000471694 PDE3BQ13370 1112 aa10.76□□□□□ -0.69
CD47-204ENST00000471694 KTN1Q86UP2 1357 aaKnown RBP10.76□□□□□ -0.69
CD47-204ENST00000471694 CCDC43Q96MW1 224 aaKnown RBP10.75□□□□□ -0.69
CD47-204ENST00000471694 FAM177BA6PVY3 158 aa10.75□□□□□ -0.69
CD47-204ENST00000471694 AKAP17AQ02040 695 aaKnown RBP10.75□□□□□ -0.69
CD47-204ENST00000471694 CCDC18Q5T9S5 1454 aa10.74□□□□□ -0.69
CD47-204ENST00000471694 FMN1Q68DA7 1419 aa10.74□□□□□ -0.69
CD47-204ENST00000471694 RBM42Q9BTD8 480 aaKnown RBP10.74□□□□□ -0.69
CD47-204ENST00000471694 CCDC34Q96HJ3 373 aa10.73□□□□□ -0.69
CD47-204ENST00000471694 UACAQ9BZF9 1416 aa10.73□□□□□ -0.69
CD47-204ENST00000471694 HMMRO75330 724 aa10.73□□□□□ -0.69
CD47-204ENST00000471694 CADPSQ9ULU8 1353 aa10.73□□□□□ -0.69
CD47-204ENST00000471694 ERICH6BQ5W0A0 696 aa10.73□□□□□ -0.69
CD47-204ENST00000471694 GPRASP1Q5JY77 1395 aa10.73□□□□□ -0.69
CD47-204ENST00000471694 HSCBQ8IWL3 235 aa10.73□□□□□ -0.69
CD47-204ENST00000471694 SLC4A3P48751 1232 aa10.72□□□□□ -0.69
CD47-204ENST00000471694 FYB1O15117 783 aa10.72□□□□□ -0.69
CD47-204ENST00000471694 IKQ13123 557 aaPredicted RBP10.71□□□□□ -0.69
CD47-204ENST00000471694 FBXO3Q9UK99 471 aa10.71□□□□□ -0.69
CD47-204ENST00000471694 EVC2Q86UK5 1308 aa10.71□□□□□ -0.69
CD47-204ENST00000471694 B4GALNT3Q6L9W6 998 aa10.71□□□□□ -0.69
CD47-204ENST00000471694 TXNDC2Q86VQ3 553 aa10.71□□□□□ -0.69
CD47-204ENST00000471694 PRDM2Q13029 1718 aa10.71□□□□□ -0.7
CD47-204ENST00000471694 HTATSF1O43719 755 aaKnown RBP10.71□□□□□ -0.7
CD47-204ENST00000471694 NECTIN2Q92692 538 aa10.71□□□□□ -0.7
CD47-204ENST00000471694 SYNE3Q6ZMZ3 975 aa10.71□□□□□ -0.7
CD47-204ENST00000471694 APPP05067 770 aa10.7□□□□□ -0.7
CD47-204ENST00000471694 SMC4Q9NTJ3 1288 aa10.7□□□□□ -0.7
CD47-204ENST00000471694 CCDC27Q2M243 656 aa10.7□□□□□ -0.7
CD47-204ENST00000471694 WWC2Q6AWC2 1192 aa10.7□□□□□ -0.7
CD47-204ENST00000471694 TMEM132AQ24JP5 1023 aa10.69□□□□□ -0.7
CD47-204ENST00000471694 C9orf78Q9NZ63 289 aaPredicted RBP10.69□□□□□ -0.7
CD47-204ENST00000471694 FANCD2Q9BXW9 1451 aa10.69□□□□□ -0.7
CD47-204ENST00000471694 DDX58O95786 925 aaKnown RBP10.69□□□□□ -0.7
CD47-204ENST00000471694 KIF6Q6ZMV9 814 aa10.68□□□□□ -0.7
CD47-204ENST00000471694 LRRFIP1Q32MZ4 808 aaKnown RBP10.68□□□□□ -0.7
CD47-204ENST00000471694 C16orf71Q8IYS4 520 aaPredicted RBP10.68□□□□□ -0.7
CD47-204ENST00000471694 MPHOSPH9Q99550 1183 aa10.68□□□□□ -0.7
CD47-204ENST00000471694 R3HCC1Q9Y3T6 440 aaKnown RBP10.68□□□□□ -0.7
CD47-204ENST00000471694 WDHD1O75717 1129 aaPredicted RBP10.68□□□□□ -0.7
CD47-204ENST00000471694 TOM1L2Q6ZVM7 507 aa10.68□□□□□ -0.7
CD47-204ENST00000471694 SPRYD3Q8NCJ5 442 aa10.68□□□□□ -0.7
CD47-204ENST00000471694 TNIKQ9UKE5 1360 aa10.68□□□□□ -0.7
CD47-204ENST00000471694 THEMISQ8N1K5 641 aaPredicted RBP10.68□□□□□ -0.7
CD47-204ENST00000471694 POGZQ7Z3K3 1410 aa10.68□□□□□ -0.7
CD47-204ENST00000471694 PLIN1O60240 522 aa10.67□□□□□ -0.7
CD47-204ENST00000471694 RBM5P52756 815 aaKnown RBP eCLIP10.67□□□□□ -0.7
CD47-204ENST00000471694 TPM4P67936 248 aa10.67□□□□□ -0.7
CD47-204ENST00000471694 ANKLE2Q86XL3 938 aa10.67□□□□□ -0.7
CD47-204ENST00000471694 CCDC146Q8IYE0 955 aa10.67□□□□□ -0.7
CD47-204ENST00000471694 A0A0U1RQG5 324 aaPredicted RBP10.66□□□□□ -0.7
CD47-204ENST00000471694 PES1O00541 588 aaKnown RBP10.66□□□□□ -0.7
CD47-204ENST00000471694 ABTB2Q8N961 1025 aa10.66□□□□□ -0.7
CD47-204ENST00000471694 DDX54Q8TDD1 881 aaKnown RBP10.65□□□□□ -0.7
CD47-204ENST00000471694 MTMR7Q9Y216 660 aa10.64□□□□□ -0.71
CD47-204ENST00000471694 TTLL12Q14166 644 aaPredicted RBP10.64□□□□□ -0.71
CD47-204ENST00000471694 FHOD3Q2V2M9 1422 aa10.64□□□□□ -0.71
CD47-204ENST00000471694 ABCC8Q09428 1581 aa10.64□□□□□ -0.71
CD47-204ENST00000471694 AIMP1Q12904 312 aaKnown RBP10.64□□□□□ -0.71
CD47-204ENST00000471694 HMGB2P26583 209 aaKnown RBP10.64□□□□□ -0.71
CD47-204ENST00000471694 NOL8Q76FK4 1167 aaKnown RBP10.64□□□□□ -0.71
CD47-204ENST00000471694 RIC3Q7Z5B4 369 aa10.64□□□□□ -0.71
CD47-204ENST00000471694 ADAMTS2O95450 1211 aa10.64□□□□□ -0.71
CD47-204ENST00000471694 PAF1Q8N7H5 531 aa10.64□□□□□ -0.71
CD47-204ENST00000471694 ELL2O00472 640 aaPredicted RBP10.63□□□□□ -0.71
CD47-204ENST00000471694 HSPA5P11021 654 aaKnown RBP10.63□□□□□ -0.71
CD47-204ENST00000471694 NLRP6P59044 892 aa10.63□□□□□ -0.71
CD47-204ENST00000471694 TPD52L1Q16890 204 aaPredicted RBP10.63□□□□□ -0.71
CD47-204ENST00000471694 CCDC88BA6NC98 1476 aa10.63□□□□□ -0.71
CD47-204ENST00000471694 CCDC144AA2RUR9 1427 aa10.63□□□□□ -0.71
CD47-204ENST00000471694 SUPT16HQ9Y5B9 1047 aaKnown RBP10.63□□□□□ -0.71
CD47-204ENST00000471694 DMRT2Q9Y5R5 561 aa10.63□□□□□ -0.71
CD47-204ENST00000471694 ERICH2A1L162 156 aa10.63□□□□□ -0.71
CD47-204ENST00000471694 TCERG1O14776 1098 aaKnown RBP10.63□□□□□ -0.71
CD47-204ENST00000471694 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.63□□□□□ -0.71
CD47-204ENST00000471694 IBSPP21815 317 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms